Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.9e-19 8.6e-15 55.7 2.8 1 29 43 71 43 71 0.97

2 4 2.3e-19 2e-15 57.8 8.3 1 29 84 112 84 112 0.98

3 4 1.2e-17 1.1e-13 52.2 5.2 1 29 129 157 129 157 0.97

4 4 7.2e-19 6.3e-15 56.2 5.4 1 29 191 219 191 219 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.9e-19	8.6e-15	55.7	2.8	1	29	43	71	43	71	0.97
2	4	2.3e-19	2e-15	57.8	8.3	1	29	84	112	84	112	0.98
3	4	1.2e-17	1.1e-13	52.2	5.2	1	29	129	157	129	157	0.97
4	4	7.2e-19	6.3e-15	56.2	5.4	1	29	191	219	191	219	0.97

Coding Sequence: ATGCCGCCGCCGCACGCGCCGCACGCCTCCCACGCGCCCCACGACAAGCCAAAAGATAACACCTACGTTCGCGACGAGTATTACGTGAGAGCGGGATACCGGTGTCGCGAGTTCCGCGAGCTACTCCAGTGCCCGGTGGAGCGCTGCGACGGCTCGGGACATGTGTCTGGCAACTTCGCGACTCACCGCAGTCTGTCCGGCTGTCCGCGAGCCGACCGCTCCCAGCTGCAGCCGCACTCGCAGGAGCTCAAGTGCCCCACCCCCGGCTGCGACGGCTCCGGGCACGTCACTGGCAACTACTCCTCGCACCGCTCCCTTTCCGGCTGCCCGCGCGCCAACAAGCCCAAGAGCAAGCCCCGGGATGGACAGGACTCGGAGCCACTGAGATGCCCTATACCGGGCTGTGACGGATCTGGACACGCGACAGGAAAATTCTTATCGCATCGGAGCGCTTCCGGCTGTCCGATAGCGAATAGGAATAAAATGCGGGTGTTGGAGAGCGGCGGCACGGTGGAGCAGCACAAGGCCGCAGTTGCGGCGGCCGCCTCTGCCATCAAGTTCGACGGCGTCAACTGCCCCACACCCGGCTGCGACGGCTCCGGTCATATAAACGGCTCCTTTCTAACGCACCGCTCTCTGTCCGGCTGCCCCGTCGCAGGCTCGTCCACGCCCACTCCGCAGCCAAAGAAGGCGAAATACCCTGATGATATTACACCTTTATACCCAAAACCATATTCAGGTATGGAGATGAACATGCAAACTGGAAACGACGGCTACTGCCCCGACGAGAACCGACCGATATACGAAACGGTGAAAAACGCGCTCCAAGACTTCACAGTGCTGCCGACACCCATTTAA
Protein Sequence: MPPPHAPHASHAPHDKPKDNTYVRDEYYVRAGYRCREFRELLQCPVERCDGSGHVSGNFATHRSLSGCPRADRSQLQPHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAAASAIKFDGVNCPTPGCDGSGHINGSFLTHRSLSGCPVAGSSTPTPQPKKAKYPDDITPLYPKPYSGMEMNMQTGNDGYCPDENRPIYETVKNALQDFTVLPTPI

Sequence clustering based on sequence similarity using MMseqs2