Phel063444.1
Basic Information
- Insect
- Papilio helenus
- Gene Symbol
- cypB
- Assembly
- GCA_026546675.1
- Location
- JAOCNA010000004.1:296909-299291[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.05 2.7e+02 2.6 0.0 29 45 75 92 74 92 0.89 2 2 3.6e-17 2e-13 51.1 0.0 4 38 102 137 99 141 0.92
Sequence Information
- Coding Sequence
- ATGATGCTAAGAAAGCACCACGAGGCCCCAAGATTACCAACAAGGTATGGAACACTGCTACGCCTCAGTACTCTTGTGTCGTATACTGGCTCGGTGATTTTGTTGGGTGCTGATTGCAAGCAGGTCTTCTTTGACATTGAGCATGGAGACAAGCCAATTGGCCGTGTTGTGCTTGGATTGTACGGAAAGACTGTTCCCAAGAAGAATCTAGATCCATTCCTCCCGCCCGGCACGCTGTACGGCCGCTGCCGGCGCGAGGGCATCGAGCTGTCGCGCGCCGCGCCCGCGCCCTGGTCCGAGCGCAGCATGGCGCTGGCGCTCGACGCCGTCAGAGTGGGCCAGATGTCTATAAACCAGGCGGCGATCCACTACAACCTGCCGTACTCCTCGCTGTACGGCCGCTTCAAGCGCTGCAAGCGTCCGCCGCAGTGTGTGCAGTACCAGCAGTCTGACCTGCAGAAAAATTACGAGGTAGATCAGAACATGCCGAGCCAGGAGTCCTTGTGTTACTACCCGCTGGCGCAGGCGCAGGCGCAGGTGCCGTACAGCCAGCTGGTGGGGGAGGCGCACGGCGTGCTGGCGCCGTGGCCGGAGTGCGGGGGCGAGCTCGCCACCAGTTGA
- Protein Sequence
- MMLRKHHEAPRLPTRYGTLLRLSTLVSYTGSVILLGADCKQVFFDIEHGDKPIGRVVLGLYGKTVPKKNLDPFLPPGTLYGRCRREGIELSRAAPAPWSERSMALALDAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKRPPQCVQYQQSDLQKNYEVDQNMPSQESLCYYPLAQAQAQVPYSQLVGEAHGVLAPWPECGGELATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -