Phel002723.1
Basic Information
- Insect
- Papilio helenus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_026546675.1
- Location
- JAOCNA010000017.1:1629296-1646864[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 6.7e-09 36.5 0.0 1 38 164 202 164 208 0.91 2 2 1.2e-16 6.3e-13 49.5 0.0 1 36 369 404 369 411 0.91
Sequence Information
- Coding Sequence
- ATGTACGGTGTTTCGGGAGATGAACTGTTCTCTGTTCTGACATCCACTTGTCAGAAAGAGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCCCGGCCGCCGCGCCGCCGCTGCTGCAGCAAATGCTGCAGTTACAGCTTCAGGCACAGACCCCGCAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTGGCGGCCCTGGGCAGCGGGCTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAGCGGCTCGCACAGACCAGGCAACAACCAGACAGGCTGGCTGAATGCGACAAGCCGCCAGCGCCAACGTCATCTCCGATATCGGCCGAGCAACCGCTGGACCTGAGCGCAAAATCCACCTCCAGCACGAGCGGCACCCCGCCCCCGGATCACAACAACTTGGATAATTCCAGATTAAAACGCTCGGTGACGGACAACGCCAACAACGTGTCGCGGCGGACGTACTCCGAGGAGGAGCTGCAGTCAGCGCTGCGCGACATCCAGTCGGGCCGGCTGGGCACGCGCCGCGCCGCCGCCCTCTACAGGATACCGCGCTCCACGCTACGCAATAAGATCAACAAGTGCGGCATCCCCACCGACCCGTCGCACGACTCCGAACCCGACAGCGAGCCCGAGCGGACCGACTCACCACCTTCCGTTATACTCAAGATACCCACCTTTCCGCCACCGGACGAGAAGAGCCCGTCCCCCGCGACGCCCGTCACCCCTATCACCCCGCTCATACCTCCGCCCCAACCGACGCTCAACCAGGCCTCACAACTACTTCTCCCGTCGGTCTTCGCCGACCCACCCTCCACCCAACACCTATTTACGTCTCTAAGCGACGTCATAGCTAAAAGTATCAGTCAGAAATTCCAGCAGCCTCTAGAGAGGCCGCCACAATCCGACCTGCCCTATATGCGCGCGCCCGATAGGCACGTGTCGGTCATAAAGACACCACCCGACAACCAGAGGAACTACCCGGCGCCGAGCAACTCGCGCGCCTCCACCAACAACAACGGACAACCAGCGGCCGGCGGCAAGGGTACGCGCCCCAAGCGAGGCAAATACAGGAACTACGACAGGGACAGTCTCGTCGAGGCGGTGAAGGCCGTGCAGCGGGGCGAGATGTCGGTGCACAGGGCGGGTTCCTACTACGGTGTGCCTCACTCCACTCTGGAGTACAAGCTTTCGACTGCATCGTCACTTCCCTATATGCGCGCGCCCGACAGGCACGTTTCGGTCATAAAGACACCACCCGACAACCAGAGAAACTACCCGGCGCCGAGCAACTCGCGCGCTTCCACCAACAACAACGGACAACCGGCGGCCGGCGGCAAGGACATATCAACCGCAGCGTTCCAGAGATTGAGCAATTACAACACGCCCACACCGCCAGCCGGCTCGCCGCCACCGCTGCCGCCCGCCGCGCCGCCCGCGCCGCCCGATCACGTGTAG
- Protein Sequence
- MYGVSGDELFSVLTSTCQKESPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRSVTDNANNVSRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPSHDSEPDSEPERTDSPPSVILKIPTFPPPDEKSPSPATPVTPITPLIPPPQPTLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQSDLPYMRAPDRHVSVIKTPPDNQRNYPAPSNSRASTNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKLSTASSLPYMRAPDRHVSVIKTPPDNQRNYPAPSNSRASTNNNGQPAAGGKDISTAAFQRLSNYNTPTPPAGSPPPLPPAAPPAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -