Basic Information

Insect: Papilio glaucus
Gene Symbol: -
Assembly: None
Location: scaffold:51911-84794[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 2.7 1.7e+02 2.8 0.2 2 23 347 369 346 369 0.90

2 37 0.033 2 8.8 0.5 1 23 429 451 429 451 0.97

3 37 2.3e-06 0.00014 21.9 1.9 1 23 455 477 455 477 0.98

4 37 0.046 2.8 8.4 2.8 1 13 482 494 482 505 0.90

5 37 0.0036 0.22 11.9 1.1 3 23 515 536 513 536 0.93

6 37 0.00061 0.037 14.3 3.5 1 23 543 566 543 566 0.98

7 37 0.00058 0.036 14.3 0.2 1 23 572 594 572 594 0.96

8 37 8.5e-06 0.00052 20.1 2.8 1 23 600 622 600 622 0.98

9 37 0.0006 0.037 14.3 2.2 1 23 628 651 628 651 0.97

10 37 0.02 1.2 9.5 2.9 1 23 720 742 720 742 0.95

11 37 0.4 25 5.4 0.6 1 23 748 771 748 771 0.92

12 37 0.0013 0.081 13.2 2.2 1 23 777 800 777 800 0.97

13 37 0.17 11 6.6 4.6 1 23 834 856 834 856 0.98

14 37 3.4e-05 0.0021 18.2 0.3 2 23 863 885 863 885 0.96

15 37 3.5 2.2e+02 2.4 1.5 1 23 944 967 944 967 0.95

16 37 0.016 1 9.8 3.6 2 23 1003 1025 1003 1025 0.95

17 37 1.5e-06 9e-05 22.5 0.5 1 23 1031 1053 1031 1053 0.97

18 37 4.5e-07 2.8e-05 24.1 1.0 1 23 1059 1081 1059 1081 0.98

19 37 0.0014 0.088 13.1 0.9 1 23 1087 1110 1087 1110 0.96

20 37 0.01 0.61 10.5 1.1 1 23 1160 1182 1160 1182 0.98

21 37 1.1 65 4.1 0.1 3 23 1199 1220 1197 1220 0.94

22 37 0.0034 0.21 11.9 0.7 2 23 1242 1263 1241 1263 0.94

23 37 0.0045 0.28 11.5 1.3 1 23 1267 1289 1267 1289 0.98

24 37 0.012 0.71 10.3 0.3 1 23 1296 1319 1296 1319 0.95

25 37 0.00012 0.0076 16.5 1.2 1 23 1354 1377 1354 1377 0.97

26 37 0.0032 0.2 12.0 1.6 1 23 1383 1405 1383 1405 0.98

27 37 1.4e-05 0.00083 19.5 1.2 1 23 1411 1433 1411 1433 0.98

28 37 1.6e-05 0.00098 19.3 3.2 1 23 1439 1461 1439 1462 0.96

29 37 0.032 2 8.9 1.4 1 23 1551 1573 1551 1573 0.93

30 37 0.3 18 5.8 0.1 3 23 1596 1617 1594 1617 0.94

31 37 8.9e-05 0.0055 16.9 2.7 2 23 1631 1652 1630 1652 0.95

32 37 0.076 4.6 7.7 3.2 2 23 1657 1678 1656 1678 0.96

33 37 0.00015 0.009 16.2 2.7 1 23 1685 1708 1685 1708 0.96

34 37 1.1 65 4.1 0.2 1 23 1714 1737 1714 1737 0.93

35 37 0.0011 0.069 13.5 2.6 1 23 1743 1766 1743 1766 0.97

36 37 0.00024 0.015 15.5 2.2 1 23 1772 1794 1772 1794 0.98

37 37 0.0038 0.23 11.8 3.6 1 23 1800 1822 1800 1822 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	2.7	1.7e+02	2.8	0.2	2	23	347	369	346	369	0.90
2	37	0.033	2	8.8	0.5	1	23	429	451	429	451	0.97
3	37	2.3e-06	0.00014	21.9	1.9	1	23	455	477	455	477	0.98
4	37	0.046	2.8	8.4	2.8	1	13	482	494	482	505	0.90
5	37	0.0036	0.22	11.9	1.1	3	23	515	536	513	536	0.93
6	37	0.00061	0.037	14.3	3.5	1	23	543	566	543	566	0.98
7	37	0.00058	0.036	14.3	0.2	1	23	572	594	572	594	0.96
8	37	8.5e-06	0.00052	20.1	2.8	1	23	600	622	600	622	0.98
9	37	0.0006	0.037	14.3	2.2	1	23	628	651	628	651	0.97
10	37	0.02	1.2	9.5	2.9	1	23	720	742	720	742	0.95
11	37	0.4	25	5.4	0.6	1	23	748	771	748	771	0.92
12	37	0.0013	0.081	13.2	2.2	1	23	777	800	777	800	0.97
13	37	0.17	11	6.6	4.6	1	23	834	856	834	856	0.98
14	37	3.4e-05	0.0021	18.2	0.3	2	23	863	885	863	885	0.96
15	37	3.5	2.2e+02	2.4	1.5	1	23	944	967	944	967	0.95
16	37	0.016	1	9.8	3.6	2	23	1003	1025	1003	1025	0.95
17	37	1.5e-06	9e-05	22.5	0.5	1	23	1031	1053	1031	1053	0.97
18	37	4.5e-07	2.8e-05	24.1	1.0	1	23	1059	1081	1059	1081	0.98
19	37	0.0014	0.088	13.1	0.9	1	23	1087	1110	1087	1110	0.96
20	37	0.01	0.61	10.5	1.1	1	23	1160	1182	1160	1182	0.98
21	37	1.1	65	4.1	0.1	3	23	1199	1220	1197	1220	0.94
22	37	0.0034	0.21	11.9	0.7	2	23	1242	1263	1241	1263	0.94
23	37	0.0045	0.28	11.5	1.3	1	23	1267	1289	1267	1289	0.98
24	37	0.012	0.71	10.3	0.3	1	23	1296	1319	1296	1319	0.95
25	37	0.00012	0.0076	16.5	1.2	1	23	1354	1377	1354	1377	0.97
26	37	0.0032	0.2	12.0	1.6	1	23	1383	1405	1383	1405	0.98
27	37	1.4e-05	0.00083	19.5	1.2	1	23	1411	1433	1411	1433	0.98
28	37	1.6e-05	0.00098	19.3	3.2	1	23	1439	1461	1439	1462	0.96
29	37	0.032	2	8.9	1.4	1	23	1551	1573	1551	1573	0.93
30	37	0.3	18	5.8	0.1	3	23	1596	1617	1594	1617	0.94
31	37	8.9e-05	0.0055	16.9	2.7	2	23	1631	1652	1630	1652	0.95
32	37	0.076	4.6	7.7	3.2	2	23	1657	1678	1656	1678	0.96
33	37	0.00015	0.009	16.2	2.7	1	23	1685	1708	1685	1708	0.96
34	37	1.1	65	4.1	0.2	1	23	1714	1737	1714	1737	0.93
35	37	0.0011	0.069	13.5	2.6	1	23	1743	1766	1743	1766	0.97
36	37	0.00024	0.015	15.5	2.2	1	23	1772	1794	1772	1794	0.98
37	37	0.0038	0.23	11.8	3.6	1	23	1800	1822	1800	1822	0.96

Sequence Information

Coding Sequence: ATGAACAAGAACAATTTATGCCGATGCTGCCTAGTGCAGCCGCCTGATAAAAAACTAAAAACGATATATACGCGTCTCGGAAAAGCTGAAATTTATGGAGATATGCTGAAAGAATGCTTCGAAATACACCTACCAATAGGCAATACAGTGGGTGATGATGGCATTTGTGACATGTGTGTGGCCAAGCTCTGCAATGCCGCGGACTTTAAGGAACAGGTGATACACTGCCAGAAGAAATTCCAGCAAATACTTTCAAGGCTGAATGTCAAAGATTTTAAAATGGCAGAATCTACTGGGAACGCTATTCCAAACCAAAATTGTCAGGAAAAGGTCTTAATCATTCCAATCATGGTTCAACCCAGTCACGATTCTCAAGACAGTCAGATTTTTGACCAAAACAAGGCATCAGAAATTGTACAAGCGCATCACAAGAACCTCAAACGTGGGAAAACACCAGCTGAGCGTATGCGAGAGTACAGAGCACGGAAAAAAAATCGCATTCAATCAACCAGGAATTCGTCTGTAGTTGTTCAGCATCAAGAACATAAAATTTTAGAAGTTGATGATAATTTAAATAATTCTTTTGAATTTGTCGGATTACCTAGTCAAAATAGCAAAGCGAGACGTAGAAAAACATCAGCTGAGCGTATGCGAGAGCACAGAGCACGGAAAAAAAATCACATTCAATCAACTAGGAATTCGTCTATAGTTGTTCAGCATCAAGAACATAAAATTTTACAAGCTGGTGATAATTTAAATAATTCGTTTGAATTTGTCGGATTACCTAGTCAAGGTAGCAAAGCGAGACGTAGAAAAACACCAGCTGAGCGTATGCGAGAATACAGAGCTAGGAAAAAAACTCGCAATCAAACAGCTAATGATTCTCCTTCAGTTGTCCATCATAACGATGATGATATTTTACAAGCTGGTGATTGCAGCAAACTCTCCTATAGGAAACTGTCACGAATTACAAAATTGAAATCATCGAAAGCGTACTCCACGTGTACCCCTTTCTCCAATAAAAATCTGATGGGCCTAGTTTGCGCGTTTTGCAAAAACATTTATCAAAACCTAAATGATCTACGAACACATTATTTAGACGCCCACAAAGATTTAAATGACAATAAGAGATTCGATAAAAGTAATTTGTGTATAAAATTAGATATAACAGATTTAAAATGTACAATATATCTCAAGAAACATCTAACCAGCCGACACGATATAAAATTCTATCCGGACATAAATGATTATATCTTAGAATTCAAACTGGACTCGTCTCAGATATACAACTGCGCGCTGTGTGACTCCACGTACGAGACATTCAAGATGCTACTTCAACATATGAACGGTCATTACAGGAACTTCGTTTGTAATGTTTGCGATTTGGGATTCATCAATCAACACAAATTAAAAAATCACATGCGAACACACGAAGTTGGCGCCTTCAAATGCAACCATTGTGACAAAATCTTCAGCACTCGCGTGAGAAAGAACTGCCACGAGAAATACACCCATAATACTACGGCGAGATATACCACGAACTGTCCCCAGTGTGAACTATCCTTTACGAGCTACTACCAACGTAATAGACATATGTACAACGACCATAACATCGTCGCGGCAAGTTATAAGTGTAATGTTTGTGATAAATCGTTCATATTGAAATCAAAGTTAACTTGTCACATTAAAAAAGTTCATCTAATGGAACGAAATCATATTTGTCCTGTGTGCGGGCAAGCATTCTTCGTCAAGCAACTCCTGGAAGAGCATATGGTCAAACATAGCGGCGAGAGAGTGTTCAATTGTACAGTGTGCCACAAAGCTTACGCCAGAAAGAAGACGTTGCGAGAACATATGCGGATACACAATAATGATAGACGGTTCAAGTGCGGATTGTGTAGCCTAGCCTTCGTGCAAAAGTGCAGCCTTAAAAGTCACATGCTCTCCAACCATGGATTGACTTTAATGGAATTTGAGAATACGCAGAGATTAAAGTTAAAGATTTCCCATCGATGGACAATATGGAGCGAAACCATAGACACGAAACGAAAATTGCCCTGGAATCCGTTAAAAAAAACTATTTTTCTGTCTCCAGGCGGCAAAACCGCGCCCAAATTCCGACTGCGATCACAAGACTTTAAGAAGGACGGCGACTCGTATCTCTGCGGGCACTGTAACAAGCGTTACAAGTTGAGCTCACTACGTATCCACGTCAAGACCAACCATTACAAGATCCCCAGATACCACTGTGAACTATGCAACACGGAGTTCATGACGCTAGCCCCTTTCACGGTCCACAAACTGGAAGTGCACAACATCGATGATAGATTTAAATGTAAAGCGTGCAAAGGCATGTTCAACACACAAGTACAATTGCGAAAACATATCAAAAACTTTCACATGCTCGGAGAGAAATATAAATGTGAGTCCTGTGATTATGAATCATTTAGTTTCGAAGGAATGTACAAACATAAATACAAACATAAAACCGTCAAAGACTATCATTGTCGCTTCTGCAGAAAGTCCTTCCTAAGGAAAACCAACTTGGATTTACATGAAAGGATACACACAGGTGATAGGAGGAATGTCTGCAAGGAGTGCGGACAAGCGTTCGTTCAGAAAGCAAGTCTAAACTATCACATGACGAAATACCATCCCAGAATACCATCCTTGTCTTGTAAGACTTGCTGGAAGAAATATATAAAAAAGAGTATAAAAGATGACCACCACAAACAGAAGTCTCAAAGACAATTTTCTGTTTTAGGCGAAGACAGATTAATCCCAGCGAAAAACTTCACCCTCGTACCCAACAAAGGCGGCGTGATCGTTCACAATTGCAACGCTTGCAAGAAGGACTATTGGAACAGAGAAGCGTTCATGCAGCATTACAAAATTGTACATCTCAAGCTGCGACAGAAATATCGCTCTTGTTATTTGTGCGAAGAGAAGGTGGCTAAGCATTTGAGGGCGGCGCATCTGGAAGAGAAACACGGCATTCCAGCGCCGACTTGCCACGCATGCGGGAAGAAATTCTCCTTCCCTAACGAAGTGTTACGTCATCAACAGCATTACCATATGGGCGAGAAGAAGTTCCGATGTGAAGAATGCGGGAAAAGTTTTGCATACAAAGCTCTACTGAAACAACACCAAGTGATGCACTCCACGTCCAAGGATTTCACGTGCCAAATCTGTGATAAGGCTTTCAAACGCGAGAAGTCGCTCCGTATGCATATTAGAATTCATTTAAATGACAGACAACACGTTTGCAATATTTGCAATGAAGCTTTCATACAAATTGGAAGTTTAAAATATCATAGACTAAAGAAACATCCAGAGAAATGTTTTTTGCATAATTGTTTTATTATGGCGAGGAAGACAAAGAAAACGATTATCGATCACGAACAGATGGCGTACGCTAACACAGTCACCATAGTCCACAACTCCTACGTCTGTCCGTTCCACAACAAAGTCAGTAACTACTACTGTTATTACTGCAAGGATCAGTTCACGAACCCGATTGAGTTGCGCGACCACACAATGTCGCACGACCCCAAAACTATGAAGATACCGAAAATCGATATCACCAGAATCGATTGTCGATTGTGCCCAGAGAAAATCGATAATTTGGAATCATTGAGGGAGCACCTCACTAGCGTCCACGCGAAAGAGTTGCATCCGATCACAAACGAGTTCCTAAAGTTTAAATTGACTCTGAACAATTTAACTTGTACCGAATGCAAGAGTACCTTTCCATACTTTGATCTACTAAAGAAGCATATGGTAGAACATTTTGGAACCTTCATCTGTGATATGTGTGGAGCGTGTTTCCTGGAACAGACTTCATTAAGAACTCACATCAAATCCCACAGTAAAGTGGAAGCGTGCTTCCCGTGTGAAATATGCGGGAAGAATCTCAAATCCAAGTACAGTAGGTACTTGCACGTTGCGACCGTCCACGAGAAGAAGCCAACGGTCAATTGTTACAAATGTGAAGCCAGTTTCTTATCATACGCTTTAAGAAATAGACATTTGATAGAAGTGCACGGTGACAAACGTACGTTCCCTTGCAAATTGTGCGACAAAGTTTACAATAGAAGGAAAACTTTAATGGAACACAATCGAAGAATTCATTTGAAAGTGTACAGACATCAGTGTGACTTGTGCGATCAAAGGTTCTATTTGCCATCGAGATTGAAGGAGCATACGGCAACACACACCGGTGAAAGGAACTTCCGCTGTGAATTCTGTGACAAGAGCTACCCCCGGCTACAGTCTTTGCAGGAACATTTACGGTCACATAGTAATGAGAGACGGTACAAATGTGATATATGTAATTCAACATTCACACAAAATGGTAGCCTCAAAAGTCACTTAAAGAGTCACCACCAAGGATATGATGTGGATTCAATCCCACCGTTCGTCTTGCAATACTTGATGATAATGACGATAATTGATCTGAGAACAGCTCAATGGGAGATTAATTCAATGTCCTTGTGTTGTAATAATTTATATAATGTTTCAGATGTACCAAAAGAAAAAGTAACGGAAAATAATAAAAAGAATATCAATAACGACATGATGGCACATCAAAATACAATATCAATTGTTGAGAACTCGTACGTCTGTCCGTTCGACACATCCTTCAGCGATTACTTCTGCATATACTGCAGGCAGCAGTTCACAGACCCCAACAAGCTGAGAGAGCACACGCTTACCCACGATCCGCAAAAATACAAGGAGCTGACGCACAAGAAAACCGTTCAAATCGATATTCTAAGAATCGATTGTAGATTGTGCCCACAGAGAATCGATAATATCGAAGATTTGAAGAGGCACATCACTAGTATTCACCAAAAGTTTTTGAAATTCCGCCTGACACCCGGTAGATTATCGTGCACCGAATGTAATAAATCGTTTACATTCTTTCACGCGTTGAAAAAACATATGGCCGAGCATTTCGGCACGTGTATTTGTGATAAATGCGGCGCGCATTACTTCCAGGAGCGAATGCTTGTCCTGCATCAGAAGACGCATCAAAGGATAGACGAAAATTATCCTTGTAAAGAATGCGGGAAGATGTTTAAATCCAAACACAACAGATACCTCCACATCGCTCGAACACATAAGAAGGAGGCGGCCTATCCATGTGCGAAGTGCGACGAGGTGTTGTTTTCCTATACATTGCGATATCGGCACATGATAGAAGTACACGGCGACAAGAGGTTGTTCCAGTGTGACCAGTGCGACAGGAATTATGACAGCAGGAAGTCCCTAAGAGAGCACAATAGGAGGTTCCATTTGAAGATCTTAAAGCATCAGTGTGATTTGTGTGACAAGAGGTTCTATCTACCTTCTAGGTTAAGGGAGCATATGTCATCACATAACGGTGAAAGGAATTTCCACTGTGAATGCTGTGGAAAGAGCTATCCAAGGCTACGCGGTCTGAAGGTCCACATGCAGTCTCACAACAGCGAGAAGAAATATAAATGTGCTTTGTGTGATGCTTCAGTGAATTTGTTAGAAATGCTGCGCAAACGCATTCATATATAG
Protein Sequence: MNKNNLCRCCLVQPPDKKLKTIYTRLGKAEIYGDMLKECFEIHLPIGNTVGDDGICDMCVAKLCNAADFKEQVIHCQKKFQQILSRLNVKDFKMAESTGNAIPNQNCQEKVLIIPIMVQPSHDSQDSQIFDQNKASEIVQAHHKNLKRGKTPAERMREYRARKKNRIQSTRNSSVVVQHQEHKILEVDDNLNNSFEFVGLPSQNSKARRRKTSAERMREHRARKKNHIQSTRNSSIVVQHQEHKILQAGDNLNNSFEFVGLPSQGSKARRRKTPAERMREYRARKKTRNQTANDSPSVVHHNDDDILQAGDCSKLSYRKLSRITKLKSSKAYSTCTPFSNKNLMGLVCAFCKNIYQNLNDLRTHYLDAHKDLNDNKRFDKSNLCIKLDITDLKCTIYLKKHLTSRHDIKFYPDINDYILEFKLDSSQIYNCALCDSTYETFKMLLQHMNGHYRNFVCNVCDLGFINQHKLKNHMRTHEVGAFKCNHCDKIFSTRVRKNCHEKYTHNTTARYTTNCPQCELSFTSYYQRNRHMYNDHNIVAASYKCNVCDKSFILKSKLTCHIKKVHLMERNHICPVCGQAFFVKQLLEEHMVKHSGERVFNCTVCHKAYARKKTLREHMRIHNNDRRFKCGLCSLAFVQKCSLKSHMLSNHGLTLMEFENTQRLKLKISHRWTIWSETIDTKRKLPWNPLKKTIFLSPGGKTAPKFRLRSQDFKKDGDSYLCGHCNKRYKLSSLRIHVKTNHYKIPRYHCELCNTEFMTLAPFTVHKLEVHNIDDRFKCKACKGMFNTQVQLRKHIKNFHMLGEKYKCESCDYESFSFEGMYKHKYKHKTVKDYHCRFCRKSFLRKTNLDLHERIHTGDRRNVCKECGQAFVQKASLNYHMTKYHPRIPSLSCKTCWKKYIKKSIKDDHHKQKSQRQFSVLGEDRLIPAKNFTLVPNKGGVIVHNCNACKKDYWNREAFMQHYKIVHLKLRQKYRSCYLCEEKVAKHLRAAHLEEKHGIPAPTCHACGKKFSFPNEVLRHQQHYHMGEKKFRCEECGKSFAYKALLKQHQVMHSTSKDFTCQICDKAFKREKSLRMHIRIHLNDRQHVCNICNEAFIQIGSLKYHRLKKHPEKCFLHNCFIMARKTKKTIIDHEQMAYANTVTIVHNSYVCPFHNKVSNYYCYYCKDQFTNPIELRDHTMSHDPKTMKIPKIDITRIDCRLCPEKIDNLESLREHLTSVHAKELHPITNEFLKFKLTLNNLTCTECKSTFPYFDLLKKHMVEHFGTFICDMCGACFLEQTSLRTHIKSHSKVEACFPCEICGKNLKSKYSRYLHVATVHEKKPTVNCYKCEASFLSYALRNRHLIEVHGDKRTFPCKLCDKVYNRRKTLMEHNRRIHLKVYRHQCDLCDQRFYLPSRLKEHTATHTGERNFRCEFCDKSYPRLQSLQEHLRSHSNERRYKCDICNSTFTQNGSLKSHLKSHHQGYDVDSIPPFVLQYLMIMTIIDLRTAQWEINSMSLCCNNLYNVSDVPKEKVTENNKKNINNDMMAHQNTISIVENSYVCPFDTSFSDYFCIYCRQQFTDPNKLREHTLTHDPQKYKELTHKKTVQIDILRIDCRLCPQRIDNIEDLKRHITSIHQKFLKFRLTPGRLSCTECNKSFTFFHALKKHMAEHFGTCICDKCGAHYFQERMLVLHQKTHQRIDENYPCKECGKMFKSKHNRYLHIARTHKKEAAYPCAKCDEVLFSYTLRYRHMIEVHGDKRLFQCDQCDRNYDSRKSLREHNRRFHLKILKHQCDLCDKRFYLPSRLREHMSSHNGERNFHCECCGKSYPRLRGLKVHMQSHNSEKKYKCALCDASVNLLEMLRKRIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -