Pgla015381.1
Basic Information
- Insect
- Papilio glaucus
- Gene Symbol
- retn
- Assembly
- None
- Location
- scaffold:7535-139046[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.2e+04 -3.4 0.2 7 31 62 88 59 90 0.39 2 2 1.7e-26 3.3e-23 81.7 0.0 1 89 208 294 208 294 0.96
Sequence Information
- Coding Sequence
- ATGGCCGACGCCGACCGTGATTCCGACCTTGGCGACGACAGCCCCGTGTCGGCACGGTCAGAAGGCGAATCGACCGGGGAGCAGTCGTGCGAGAGCTCGGACGAAGGTGTAGGGCGAGATGTACCAGTTCATCAGCCGCACCAACCGCATCAACCGCACCAACCGCATCAGCCGCACCAGCTGCAGCAGCTGCACCAGCCGCACCAGCTACATCAACACAACATCAACCACAATATGAATCACGCCATCAACCATCAGCCGATCAACAACCAGATCAATCAACACCAGAGAAATTCGCCGCGACCGCTTGAAAGGGAACTTAAGGTCCGAGATGACTTTGAATTACTGAAGACTTCGCTCCATCCGCATCTGTCCTCGCTGGCATCGCTGGCTCAGGGAGCTCCCCTGTCGGCGCCGAGCAACGTGTTCGCATTGGCGGGAACCGGGGCGACTGGAGGATTCCCCTATGCGCCTCCAGCTTTCCTCGCGCCCGCGCCCCCGCCGCCCGCGCAGCCCGTAGGCTCGGCCTCCTCATCCTCATCCGAAGGTAGCGCCGCCGGATGGAGCTTTGAAGAGCAATACAAGCAGGTCCGTCAGCTATATGAGATCAGCGACGACCCGCAGCGGAAGGAGTTCCTCGACGATCTGTTCTCATTCATGCAGAAGCGCGGCACTCCCATAAACCGGCTGCCGATAATGGCGAAGTCGGTTCTCGATCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCGGCTGCCCTCCTCTATCACCTCCGCCGCGTTCACACTTCGCACACAATACATGAAATACTTATACGACTACGAGTGCGAGAAGAAGAACCTGTCAACGCGGAGCGAGCTGGACGCCGCCATCGAGGGCAACAAGCGCGAGGGCCGACGCGCCTCGGGGCAGTACGACGCGCAGGCGGCGCTTGCCATGCACAGTACAGTACATCTGTCAGATGCAACCAAAACATTGCAACCAACAGGCATTCACTGCGTCCACTGCTGTGGTCTTACTATGCCACTCCCCCACGACATCGAGTACCGAGTGCGCGAGTACATGAAGATGATCCAGCAACAACGGGACCTCATTAGAAATGGGTCGGAGTCACCGCCCAGCAACGGGGGTACGATGATGTCGCCCCGTGAGGCCGCACTGAGCGCGATAGACGTGTCGCGCCTCACGCTCTGGTCGCTCTACAACAACAACAACAACAGTCCCCAGCCTGACCTCGAGCCGCAGCGGTACGACCACGCACACACGCCACAGCTCAATGGCAATGCCAACGGAGTCAACAATGGAGTCAATGGGGCCGCGTTCAAAATCACAACCAGAGGTGATGCAACCACCGGGGATCAACAACTAGTCGTCTCGATCGAGCTCAACGGAGTCACGTACGAAGGCGTTCTCTTTCCCTCACAAAACGGAAATGGCCAAAGCGCTCACAGGCAAATGGTTTCTTAA
- Protein Sequence
- MADADRDSDLGDDSPVSARSEGESTGEQSCESSDEGVGRDVPVHQPHQPHQPHQPHQPHQLQQLHQPHQLHQHNINHNMNHAINHQPINNQINQHQRNSPRPLERELKVRDDFELLKTSLHPHLSSLASLAQGAPLSAPSNVFALAGTGATGGFPYAPPAFLAPAPPPPAQPVGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMHSTVHLSDATKTLQPTGIHCVHCCGLTMPLPHDIEYRVREYMKMIQQQRDLIRNGSESPPSNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQRYDHAHTPQLNGNANGVNNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQSAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01147206; iTF_01138744;
- 90% Identity
- -
- 80% Identity
- -