Pgig019074.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio gigon
Gene Symbol
ZFX
Assembly
GCA_027563995.1
Location
JAODUI010000032.1:7034700-7040706[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 4.9 3.5e+02 2.1 0.3 2 23 6 27 5 27 0.94
2 13 0.0041 0.3 11.8 0.7 1 23 1002 1025 1002 1025 0.92
3 13 8.3e-05 0.006 17.1 2.3 2 23 1128 1149 1127 1149 0.97
4 13 6.7e-05 0.0048 17.4 1.8 1 23 1155 1177 1155 1177 0.98
5 13 0.0047 0.34 11.6 2.4 2 23 1184 1205 1183 1206 0.95
6 13 1.6 1.1e+02 3.7 1.6 5 23 1219 1237 1217 1237 0.97
7 13 0.0087 0.63 10.8 3.5 2 23 1243 1265 1242 1265 0.96
8 13 0.02 1.5 9.6 0.1 2 23 1282 1302 1281 1302 0.96
9 13 2e-05 0.0014 19.1 0.7 1 20 1308 1327 1308 1330 0.92
10 13 0.0024 0.17 12.5 2.4 1 23 1338 1360 1338 1360 0.99
11 13 0.0045 0.32 11.7 7.2 1 23 1366 1388 1366 1388 0.98
12 13 7.2e-06 0.00052 20.5 1.4 1 23 1394 1418 1394 1418 0.97
13 13 0.00082 0.059 14.0 5.1 1 23 1424 1446 1424 1447 0.95

Sequence Information

Coding Sequence
ATGGATTCGAGAGTTCAGTGCCCTGTGTGCACTCTATACTTACACAGTGGAATGACTTTAGAGTCTCATTTGGACACACATCCGAAGGATCAAGTTATAAAGGCTTTATGTAGTCTGTCAACTAAGAACACCAATTATGGGAGTCGCACTTCAACACCATCGCAATCCGAGCGATCCTACCAGAGTCGATCTCGTACTCCGGCAGCAGACGACGGCATTCGGTGGATGGGCTCCCACCAGAGTTTGGATAGTGAAAAATACTGGAGAAGGACACCAAGTAGGAATAAATTAACACCACTTTCCAACCCATCAAGAAATGTAACACCAGATATAAGGATTGCTGATGTCAATTTTGAAAATAGTCATATAAACCATGGAGGTCAGTATTCTGCTAACTCATACACAATGAAACTAGATAAAACACAGCAGACATATGCACCCAATGTCCGACTAGCAGAATTTGACCAACAGTACCCATATTATCCTGAGCAAAGTGAAGATCGTGAGATCAAATATTCTCGTAGTTTGGACTACAATACGATTGATAGTTCAGGTAATGCGTTTACTTATAATATGCCTCAGATTGCTCCGAAAGCTCCTGCGTCTATTGCACCAACACTTGTACCACCGAAGAAAAGTAGTGACCTTGTTAAATTAATGCCCAAACAGGAGTTTGTTAAATTACTGCCAAAGTCTAATAATATTCTCTTCAAAAACATGAGTGGAGTACAATACATAACCCCAGGTGTTAATGTTGTGATGCCATCATCACCTTTTGTGCAGAAAAATGTTCAAAGTAACATGATAATGTCTGGTAATCTACCCCCAAATCAAACACTCAACACCAAAGCAGGTGCTCAACCTATCATGCCTAATCAGTATAACCAGATGGGGTCCAATACCTTCTCACCTGGTACGACAGTGGTCACTCAAAACTCACAGATTATTTATAGAGAAATGGTTCATAACTTGGATGGCAAGCCTTTTATTTCAACTGTACCTAATATGCTTGGAGGTCATGACAACATTGGTAATGTCACTCAAAGTAGCTCTATATATCAGAATGTTGTTGTAGTCGACCAGTTTGGTAATACATCGTGTATGTATGCAAATCCTCAACAAATATTGCAAAAGCCTTGCAATGCTTCCATTTACCCTGACAGCTCATTACTAGTTTCTAATGAACAAAAGAAAAGATCTAATGATGAAGTGGACAGTAATAAAACTTTAATCATTGAGGTGAGCCCCATCAATACTCCAGCTACTGGGAGGATTGGTGATGTAAGTGGAAGTTCATCTCTTGGGGCATCTTCGGGAATGGATGATAACAGTAAAACGGAAGAAACAGAGCTGAAGAATGAACCAATTGTAGCCACTAAAGGTCTCAAAATTCTTAGCAATATTAAAGTGGAGGTGCCAGTACAACATAAGAAAAGCATGTTAAATACAGTAATGGATTTAACAGGAACCAATGATCAAGAATATCCTGAAAGCTCGGTCACACCAGAGAAGATCTTACCCGACCTAGAAGATAATAATCAAAGCTTTTCAGATGACTGCACGCAGCCTTCCATAGCAAGTGGAGATAGCTTAGTGTCAAATGCATTTTCTGTGATAAAAAATGTAGGAAATCCTCCATCATACAAAGATTCGCCTTCCAAGTCTAGCATCGTAGGTAGCAAAATTGAAACTGATTTTTCAGATAGTTGTCCTGTACCTGATTTAATATGTAACGAAAAACCTTCCATTTCTCCATGTAGTGAGTTGTCAGAACACGGGGACAATTCCACAGATATTGTGCCATTGTCACCTAAAGCAGACAGCAGTAGGAGTAGTCTAAGTGCTATAAATGAAATTGTAGAAGAAAATAAATTCACACATAAAGAATCAAAAAAGAATATGTTAAGGTTAAATAACATCTATGTCAAAAAACATAAGAAGGTTCTACAGATTAAGAACGCAAAGGCAAATTTATCACTTGAATCTTCCAATAAGAGTGAAGTGGAACCACTACCCTCCTCTTCCATCTGTAAAACACCAGAAAATTTTAGTATAAACAAAATCCATCATACTGAAAAAATGGATAGTCCTAAAACCAGTTCCTTACAAACTGTGTCTATTGAGAAATTAAAGGCTAATGACCACAGTGAGTTTGATGCAGACACAGAGGAACAGTCTATGGACATAGAACCTATAGCGCCATCTAGCTTAAATGATTCTAATCAGTTTTCCATGCATGAGGTGAAGGTAAAAGAAGAATTTAATACAAGCAACGAGGGTGGTTTCAGTAACCAAGGTAGACCATTACAGAGCATACCACAATTGGAGAGTCTGAGACCTATCAATGTGATATCCTATGGTAACATGGTGCCTGCTGACTTTGACAATGATTCAAACCACAGGGAGCTGTTAGATTTGGAGACATCATCGAAGAACAAGCAGTTTGTTAATATGATGAATGAAAATTATTTTGGTGATAACATTTACGCTGACTACTTCACCCCAGATAGGGTTGAATCCTTTGAGGCTCAGAAGCAGGCTGGTTTTAGGGAAGGACCAAAAGACAATATGTACATTTGGGGAGAACCTTCTCAGAAGGAATCTGAGTTTGTATTGCCAAATTTTATCCATGAGAGCTACAAGATTGCTGAGAGCAGTGGCCCTGATTACTCAGAGATGGGTGACGGATGTAACATTGGTATGGAAACCGACCGGTGTGAACAGGATAGTAAAGTGGATATGTTGAGTGAGAGTCGAAGTGAAGGGGAGACTCCATTAAACATTTGTGCTGATGAGAGAATGCCTCCGAGGGGAGAGCTCAGTGGACAGGAGAGTAATGGAGATATGGAGTCACCTTGGAGTGGGATGTACAATGAGGTCACGCCTTCGGAGCCCTACGACCTGATGGCGCGCGAGAGCTGGGTGTCGGATGGCTCTGACGTTGATGCCAACGAAAAACGGGATAGCATTGAGGACGAGTTACACTATCCAAAGAGCAGACTGCACACGTGTTCACAATGCGGTATCAAGTATCCGTCGCTGAAGGAGCTGCGGGCACACAAGGCGCTGTCCCACTCGCTGCCCACCTGCTCCAACGGGAAGACCAGCTACAGCCGTCTGGTCACCGCCAGGACTATTAAGAAGGAGGAGAAACTAGATGAAAATGTTTTGGAAAGGAATCTCCTAACGATAGATTCAAAGGAATCAATGGTAACAACGATGCAACAAGTTTATGACGCCATAGCTGAAGCTAAGCCTGCTATAGAGACATTAGTGAAACAAGAGACCAAGAGGAAGAAGAAGGACTACATCTGTCCAACATGCAAGGTGGACCAGTTATCTGAGGTGTCGTTCAACGCCCATCTTAAAATACATCCGTTGGAGTGCCTCACGTGTGGGAAGTGCTTCTTCAAGAGAGGCAGTCTAGCACTACACATGAAAACACATCTAGGAATCAAGAATTTTAAATGCGATCTATGCGAGAAACGGTTCGTGACGCGTCAGAAGCTGACGGAGCACCGCAACGTGCACACGGGCCGCATGCCCGTCAAGTGCACCGTCTGCGATGACACCTTCCGCAGATACTCCAACATGGCGCAGCACAGAGATCGCCACCATTACCAGAAGAGAGCCAAGGTCCGCGACTTCGTGTGCCACTGCGGTGCGGTGTACCACTCGAGGGCGAAGCTCCTCTGGCACAAGGAGACGCACGACGCCAAACCCAAGTCCTGCCTCTACTGCAGTGACAAATTCGTGCACTCGTCGTCACTGACGCGTCACGTACGACGCACGCACAACGCACACTTCCTCTCAGAAAAGGTGAAAGGGAAGGAAGTTAATGTGCCTTGCCCTGTTTGCAAACAGATCTACCTAAGGTCGAATTTACGCGCTCATCTTTTAATACACAGCGGCAAAAAGCCGTATCCGTGCGTCATCTGCAACAAATCCTTCACAACCAAGTGGAATCTCAAACTGCACCGGTGGACTCACATGAGTCGTTCAGCTAAACCGTTCAAGTGCCATCTGTGTAAAGGTGCATTCATACGATATACTGAATACATATCTCATATGAATTCGCACAAGTCATTAAGACCTTACACGTGTAATTACTGCGGTTGTCAGTTCATCAGAAAGTATAATTGTCAACGTCACGTCAGAGAACACGAGATGGCTAAGAAGTTTGTCTGCAAGGTGCCCGAGTGCGGGAAGTCCTTCCACAGGAGTTACTACTTGTCGGAACATATGAAAGTACATAGTGGAGCGAGACCGTTCTCTTGTAATATATGTGGAAAAACTTCAAGCAATAAGTCTAACCACAATAAACATGTGAAGATACATCATGCTAGAGAGCCCGTGGCCACCGAGGCGTAG
Protein Sequence
MDSRVQCPVCTLYLHSGMTLESHLDTHPKDQVIKALCSLSTKNTNYGSRTSTPSQSERSYQSRSRTPAADDGIRWMGSHQSLDSEKYWRRTPSRNKLTPLSNPSRNVTPDIRIADVNFENSHINHGGQYSANSYTMKLDKTQQTYAPNVRLAEFDQQYPYYPEQSEDREIKYSRSLDYNTIDSSGNAFTYNMPQIAPKAPASIAPTLVPPKKSSDLVKLMPKQEFVKLLPKSNNILFKNMSGVQYITPGVNVVMPSSPFVQKNVQSNMIMSGNLPPNQTLNTKAGAQPIMPNQYNQMGSNTFSPGTTVVTQNSQIIYREMVHNLDGKPFISTVPNMLGGHDNIGNVTQSSSIYQNVVVVDQFGNTSCMYANPQQILQKPCNASIYPDSSLLVSNEQKKRSNDEVDSNKTLIIEVSPINTPATGRIGDVSGSSSLGASSGMDDNSKTEETELKNEPIVATKGLKILSNIKVEVPVQHKKSMLNTVMDLTGTNDQEYPESSVTPEKILPDLEDNNQSFSDDCTQPSIASGDSLVSNAFSVIKNVGNPPSYKDSPSKSSIVGSKIETDFSDSCPVPDLICNEKPSISPCSELSEHGDNSTDIVPLSPKADSSRSSLSAINEIVEENKFTHKESKKNMLRLNNIYVKKHKKVLQIKNAKANLSLESSNKSEVEPLPSSSICKTPENFSINKIHHTEKMDSPKTSSLQTVSIEKLKANDHSEFDADTEEQSMDIEPIAPSSLNDSNQFSMHEVKVKEEFNTSNEGGFSNQGRPLQSIPQLESLRPINVISYGNMVPADFDNDSNHRELLDLETSSKNKQFVNMMNENYFGDNIYADYFTPDRVESFEAQKQAGFREGPKDNMYIWGEPSQKESEFVLPNFIHESYKIAESSGPDYSEMGDGCNIGMETDRCEQDSKVDMLSESRSEGETPLNICADERMPPRGELSGQESNGDMESPWSGMYNEVTPSEPYDLMARESWVSDGSDVDANEKRDSIEDELHYPKSRLHTCSQCGIKYPSLKELRAHKALSHSLPTCSNGKTSYSRLVTARTIKKEEKLDENVLERNLLTIDSKESMVTTMQQVYDAIAEAKPAIETLVKQETKRKKKDYICPTCKVDQLSEVSFNAHLKIHPLECLTCGKCFFKRGSLALHMKTHLGIKNFKCDLCEKRFVTRQKLTEHRNVHTGRMPVKCTVCDDTFRRYSNMAQHRDRHHYQKRAKVRDFVCHCGAVYHSRAKLLWHKETHDAKPKSCLYCSDKFVHSSSLTRHVRRTHNAHFLSEKVKGKEVNVPCPVCKQIYLRSNLRAHLLIHSGKKPYPCVICNKSFTTKWNLKLHRWTHMSRSAKPFKCHLCKGAFIRYTEYISHMNSHKSLRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143337;
90% Identity
iTF_01140421;
80% Identity
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