Pgig008950.1
Basic Information
- Insect
- Papilio gigon
- Gene Symbol
- Mblk-1
- Assembly
- GCA_027563995.1
- Location
- JAODUI010000017.1:1771547-1807299[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-12 6.6e-09 35.5 0.0 1 38 435 473 435 479 0.91 2 2 6.9e-19 1.4e-15 56.9 0.0 1 43 640 683 640 685 0.95
Sequence Information
- Coding Sequence
- ATGCAAGCGCAGCTTCCTACACAAAATGGCCATATTGAAGAAAGTTTATCGCGCGGCAATAAACATCGACAATTAATATTCGATAATTATGAACTCGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAACGGAGCGACGGGGAACAGTCCAGCGACGAGGATACCACGCCTGCCACCGACCCCCCGCCCGCTCTCAAGATAAAGACCATCGAGGAGATCAACGCGCCAGACGAGACCAGGGCAGGGGAAGAGACGAGGGCTGGACTCGAGACCAGGGCAGGGGACGAGACGAGAGCCCGGGACGAGGGCGGGGCGAAAAGCGGCCGGCCGGAGACGATACTGGAGAGCCTCATCAAACGGCCCGCGACGCAGCCCAAGCTCGAGCTGCCAGAAGAGCCGGCAGACTGGAAGCCCCCGGAGAAGTGCTACTTCTGCGTGGACGGGGCTGAGCAGCCGGCCACCGACTCCCGACCAGCGCCCACGTTTATAGTAAACCCTTTAGCTGACAATAGCAATTATATGCCTTGTCTAAATCAAGCTTTGAAGCGTCCAACACCGAAGACCCCTCCGATCTTGTACGCGCCGAAGCGCCGCCGTTCGCCGCTGGCACCGCCGGAGCTCAGCCGCCGCTGGTCGCCCGGCAAACCATACTTTCAATTTACGAAACAATACCTTATCCATTTGCTACGATTCCACGTCAAAAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCGCGTAGCCCGGCCGCCGCGCCGCCGCTGCTGCAGCAGATGCTCCAGCTTCAGCTCCAGGCGCAGACCCCTCAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTGGCGGCGCTGGGCAGCGGGCTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATTCAGCGGCTCGCGCAGACCAGGCAACAGCCAGACAGGCTGGCTGAATGCGAGAAGCCGCCAGCGCCGACCTCGTCGCCGATATCAGCGGAACAACCGCTCGACCTGAGCGCCAAGTCCACGTCCAGCACGAGCGGCACCCCGCCCCCGGACCACAACAACTTGGACAATTCCAGATACGATAAAATCTGTCCACCGTTATCAAATATTTTGTTTAAAGAAATTGCGACAAACGCGTACGGGATTTCACAAGTTAATCCAACGGACGACGGACCCGGGTCATGTTCCGGGGATAATGTATTCAGATTAAAACGCGCGGTGTCGGATAACAGCAACAACGCGTCGCGGCGGACGTACTCCGAGGAGGAGCTACAGTCGGCGCTGCGCGACATCCAGTCGGGCCGGCTGGGCACGCGCCGCGCCGCCGCCCTCTACCGGATACCGCGCTCCACGCTGCGCAATAAGATCAACAAGTGCGGCATACCCACCGATCCCGCGCACGACTCCGACCCCGACAGCGAGCCCGAGCGCACCGATTCGCCGCCTTCCGTCATACTCAAGATACCCACCTTCCTGCCCCCCGATGACAAGAGTCCCTCCCCCGCGACGCCCGTCACCCCCGTCACGCCGCTCATACCGCCGCCGCAGCCGCCGCTCAACCAGGCTTCCCAGCTGCTGCTGCCCGCGGTCTTCGCCGATCCTCCCTCAACACAACACCTATTTACGTCCCTAAGTGACGTCATAGCTAAAAGTATCAGCCAGAAGTTCCAGCAGCCTTTGGAGAGGCCACCGCAGCCCGATCTGCCCTTCATGCGCGCACCCGACAGGCACGTGTCTGTCATCAAGACGCCCCCGGACAACCAGAGGAACTATCCGGCGCCGAGCAACTCCCGCGCCGCTACCAACAACAACGGCCAGCCGGCGACCGGCGGCAAGGGCACGCGCCCCAAGCGAGGCAAGTACAGGAATTATGACAGGGACAGCCTCGTCGAGGCGGTGAAGGCGGTGCAGCGGGGGGAGATGTCCGTGCACAGGGCGGGCTCCTACTACGGTGTGCCGCACTCCACCCTGGAGTACAAGGTCAAGGAGCGACACCTGATGAGGCCGAGGAAGAGGGAGCCGAAGCCGCAACAGGAACCGAAGCCGCAACCCAAGCCGCCGCCGAAGCCTCCTACCAAACCCTTCACGAACGGACTTAACGGGCCTGAAGCCTACCCCTCGGGGTACCCGTTCTGGGCGGGGGGGTTTGCCCCGCCGCCCGCGCCGGACCTCTACGCCTCGCACATGATGCGACGACTGCGCGACGAGGCGCCGCCCGCGAACGGATCCTTCCTCGAGGGGATCATTAGATCGAGCCTGGAGAGGCCGCTGATCCAGCGGCTGGCGGAGCCGCGGGCGCCGATGGCGACGAGCGAGGCGCCCAGCCTGCTGCGGCGACTGGCCGGCGAGCCCGAGGAGCCACCGCCCGCGCGCCGTCCGCGCATCGATAGCTCGGACCGGCAGTTGGCCGCGGAGATGCGCGAGGCGGTCCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCGGCCGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTTCTTTCGAGTTATAAGGTCAGACGAAAGGCATAAATATATAACCCACTTTATAACTCATTGTTGTTTATATAATTACTATAAAGTACATTCCGTTGGCGAGACGCGTCGCAACTTCGGTGTCGGTGTGCCTCCATTATGGCTTTAG
- Protein Sequence
- MQAQLPTQNGHIEESLSRGNKHRQLIFDNYELGLERVAEELMGRRKWKLYQDALIPKRSDGEQSSDEDTTPATDPPPALKIKTIEEINAPDETRAGEETRAGLETRAGDETRARDEGGAKSGRPETILESLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPATDSRPAPTFIVNPLADNSNYMPCLNQALKRPTPKTPPILYAPKRRRSPLAPPELSRRWSPGKPYFQFTKQYLIHLLRFHVKSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECEKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRYDKICPPLSNILFKEIATNAYGISQVNPTDDGPGSCSGDNVFRLKRAVSDNSNNASRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPAHDSDPDSEPERTDSPPSVILKIPTFLPPDDKSPSPATPVTPVTPLIPPPQPPLNQASQLLLPAVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRAATNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEPKPQPKPPPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATSEAPSLLRRLAGEPEEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGXXXXXXXXXXXXXXXXXXXGFFRVIRSDERHKYITHFITHCCLYNYYKVHSVGETRRNFGVGVPPLWL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- -
- 80% Identity
- -