Pgig011543.2
Basic Information
- Insect
- Papilio gigon
- Gene Symbol
- retn
- Assembly
- GCA_027563995.1
- Location
- JAODUI010000008.1:2305523-2310139[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-19 1.8e-16 60.4 0.0 17 89 61 131 56 131 0.95
Sequence Information
- Coding Sequence
- ATGCGATGCGATACGATTTGGCACGCTCTCCCGGCTTTACGGGTTTTACGGATCTTACGTACTTTACGAGTTTTACGGCCCTTACCCGCTCCGGCTGTAAAGGGTTTTACAGCGGCGGCAACGGGCAACGATCTGACTTACGGCGCGACGCTCGCCCGCGGACCTCGTTTCCTTGTCGTTGGCACTCCTATAAACCGGCTGCCGATTATGGCGAAGTCCGTGCTGGACCTGTACGAACTGTACAACCTGGTGATAGCCCGCGGCGGGCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCGACTGCCCTCCTCCATCACTTCCGCAGCCTTCACACTGCGCACACAATACATGAAGTATTTATACGACTACGAGTGTGAGAAGAAGAACCTGTCAACACGCAGCGAGCTGGATGCGGCCATCGAAGGCAACAAGCGCGAGGGACGGCGCGCCTCGGGGCAGTACGACGCTCAGGCGGCGCTCGCCATGCCGTCACTGAACCGCGGCGTGTCGCTGTCGCTGCCACTGGCCCAGCCGCTCGCGCTGCCGCTGGGCGCAGTGCCGCGGCTGCCGCTGCACGCGCCGCACCTGCACTCGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATACAACAACAACGGGACCTCATCAGAAACGGGTCAGAATCTCCTCCCGGCAGCGGCGGCACGATCATGTCGCCGCGCGAGGCCGCGCTCAGCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCTCTACAACAACAACAACAACAGCCCGCAGCCCGACCTCGAGCCGCAGCGTGAGGCGTTGAATTTGAGCGAAAGTCCGAATTCGACGGCAAGTGGCGGTGATGCCAACACAGGAGACCAGCAACTGGTGGTATCAATAGAGCTGAACGGAGTGACATACGAAGGAGTGTTGTTCCCCTCGCAGAGCAACGGCCAGGGCGCGCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MRCDTIWHALPALRVLRILRTLRVLRPLPAPAVKGFTAAATGNDLTYGATLARGPRFLVVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSLPLAQPLALPLGAVPRLPLHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPGSGGTIMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTASGGDANTGDQQLVVSIELNGVTYEGVLFPSQSNGQGAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -