Basic Information

Insect: Papilio elwesi
Gene Symbol: ZFX_1
Assembly: GCA_029641285.1
Location: CM056344.1:10790519-10799627[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5 4.4e+02 2.1 0.3 2 23 6 27 5 27 0.94

2 13 0.0063 0.56 11.2 1.0 1 23 998 1021 998 1021 0.92

3 13 0.00015 0.013 16.3 2.4 2 23 1124 1145 1123 1145 0.97

4 13 6.9e-05 0.0061 17.4 1.8 1 23 1151 1173 1151 1173 0.98

5 13 0.0048 0.42 11.6 2.4 2 23 1180 1201 1179 1202 0.95

6 13 1.6 1.4e+02 3.7 1.6 5 23 1215 1233 1213 1233 0.97

7 13 0.0089 0.78 10.8 3.5 2 23 1239 1261 1238 1261 0.96

8 13 0.05 4.4 8.4 0.3 2 23 1278 1298 1277 1298 0.96

9 13 2.4e-05 0.0021 18.9 1.2 1 20 1304 1323 1304 1326 0.92

10 13 0.0014 0.12 13.3 3.2 1 23 1334 1356 1334 1356 0.98

11 13 0.019 1.6 9.8 7.3 1 23 1362 1384 1362 1384 0.98

12 13 9.2e-06 0.00081 20.2 1.3 1 23 1390 1414 1390 1414 0.97

13 13 0.00084 0.074 14.0 5.1 1 23 1420 1442 1420 1443 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5	4.4e+02	2.1	0.3	2	23	6	27	5	27	0.94
2	13	0.0063	0.56	11.2	1.0	1	23	998	1021	998	1021	0.92
3	13	0.00015	0.013	16.3	2.4	2	23	1124	1145	1123	1145	0.97
4	13	6.9e-05	0.0061	17.4	1.8	1	23	1151	1173	1151	1173	0.98
5	13	0.0048	0.42	11.6	2.4	2	23	1180	1201	1179	1202	0.95
6	13	1.6	1.4e+02	3.7	1.6	5	23	1215	1233	1213	1233	0.97
7	13	0.0089	0.78	10.8	3.5	2	23	1239	1261	1238	1261	0.96
8	13	0.05	4.4	8.4	0.3	2	23	1278	1298	1277	1298	0.96
9	13	2.4e-05	0.0021	18.9	1.2	1	20	1304	1323	1304	1326	0.92
10	13	0.0014	0.12	13.3	3.2	1	23	1334	1356	1334	1356	0.98
11	13	0.019	1.6	9.8	7.3	1	23	1362	1384	1362	1384	0.98
12	13	9.2e-06	0.00081	20.2	1.3	1	23	1390	1414	1390	1414	0.97
13	13	0.00084	0.074	14.0	5.1	1	23	1420	1442	1420	1443	0.95

Sequence Information

Coding Sequence: ATGGATTCAAGAGTTCAGTGCCCTGTGTGCACTCTATACCTACACAGTGGAATGACGTTGGAGTCTCACTTGGACACACATCCAAAGGACCAAGTTATAAGGGCTTTATGTAGTCTGTCAACGAAAAACACCAATTATCGGAGTCGTACTTCTACTCCTTCACAATCGGAGCGTTCATACCAGAGTCGATCTCGTACTCCAGTAGCAGATGATAGCATGCGGTGGATGGGCTCCCACCAGAGTTTGGATAGTGATAAATATTGGAGAAGAACACCAAGCAGAACTAAGTCCACCCCACTTTCTAACACATCAAGAAATGTCACACCAGATATTAGGATTGGAGATGTGAATTTCGAAAACAGCCATATTGACCGAGGAGGTCAGTATTCTGAGAAttcatatacaataaaattagataaaacaCAGCAAACATATGTATCCAATGTCCGAGTAGCAGAATTTGATCAGCAATACCCATATTACTCAGAGCAAACTGAAGATCGTGAGATTAAATATTCTCGTAGCTTAGATTACAATACAATTGACAGTTCAGGTAATGCTTTTACTTATAATATGCCTCCAATTGCCCAGAAAGCTCAGTCTTCTGATGCATCAACACTTATACCACCGAAGAAAAGTAGTGACCTTGTGAAGTTAGTGCCCAAACCAGAACTTGTTAAATTACTGCCAAAgtctaataatatatttttcaagaatATGGGCGGAGTACAATATTTAGCACCAGGTGTTAATGTGGTGATGCCGTCAACAccttttgtacaaaaaaatgttcaaagtaACATGATAATGTCTGGAAATCTACCTCCACCGCCAACTCTGAATGCCAAAGGAGAAACTTCACCTATAGTCCACAATCAATATAACCAAATGGGGCCAGGTACCTTCTCACCGGCTACTACTGTAGTCACTCAAAACTCCCAGATTATATATAGAGAAATGGTTCATAACCTGGATGGTAAACCATTTATTTCAACTTTACCTAATATGCTGGGAGGTCATGATAATATTGGAAAAGTTACTCAGAGTAGTTCAATATATCATCAGAATGTTGTAGTAGTTGATCAGTTTGGAAACACTTCATGTATGTATGCTAATCCCCAACAAATCCTCCAAAAGCCTTGCAATGTTTCTGTTTACCCTGAAAACTCAACATTGTTATCTAATGAACTAAAGAAAAGATCTAATGATGAAGCAGACTGCAATAAAACTCTAATAATTGAGGTAAGTCCCATTAATACTCCAGCCACTGGTAGAATCAGTGATGCAAGTGCCAGTGCATCTCTTGTGCTCTCATCAGACATTGATGATAAGAGTAAAATAGAAGAGAAGGAGTTTAACTCCTTGGAACCCATTGGATCAACTAAAGGTCTTAAAATTCTTAGCAACATTAAAGTGGAAGTGCCAGTTCAACATAAGAAAAGTATGTTAGATACGGTAATGGATTTAACAGTAACCAATGATCAAGAATATCCTGAAAGTTCGGTCACACCGGAAAAGATATTACCTGACCTAGAAGACAATAATCAGAGTTCCATAGCAAGTGGAGATAGCTTGGTGTCAAATGCCTTTTCTGTGATAAAAAATGTAGGAAATCCTCCATCATACAAAGATTCGCCTTCCAAGTCTAGTATAGTATGTAGCAAAATTGAAACAGATTTTTCCGATAGTTGCCCTGTACCTGatttaatatgtaatgaaaAACCTTCTATTTCACCATGTAGTGAGCTGTCAGAACAAGGGGACAATTCTACAGATCATATACCATTGTCGCCTAAAGCCGACAGTAGTAGGAATAGTCTTAATGTTATGAATGAAACTGTAGGGGGAGAAAGGAAATTCCCGCGTAAGGAATCAAAAAAGAATATAATCAAGTTGAACAgcatgtatgtaaaaaaacacaagaaGATTCTgcagattaaaaatttaaagacatGTTTATCTCATGAATCTTCTAATAAAAGTGAAATGGAGCCTCTAGCAACCTCTTCTATTTGTAAAACGCCAGAAAATTTTagtataaacaaaatacatcATACTGAAAAAATAGAAAGTCCTAAAACCAGTTCTTTACAAACTGTGTCCATTGACAAATTGAAGGGTAATGACCGTAGCGAGTTTGATGCAGACACAGAAGAACAGTCAATGGACATAGAACCTATAGCTCCATCTAGCTTGAATGATACTCATCAATTTACAATTCATGTTGATGTAAAGGTAAAGGAGGAATTCAACACCATCAATGAGGCAAGCTTCAGTAATCAAGATAGGCCATTACAGAATATAGCATCAATGGAGAGTCTGCGGCCCATAAATGTGATATCTTACGGTAGTATGGTACCAGGAGATTTTGATAATGAGTCAAATCACAGGGAACTATTAGATTTGGAGGCTACATCGAAAAATAAGCAATTTGTTAACATgatgaatgaaaattattttggtgACAACATTTATGCAGATTACTTCACCCCCGATAAGGTTGAATCTTTTGATGCTGGGAAAGAATCTAGTTTTCGGGAGGGGCCCAAAGAGAATATGTACATTTGGGGGGAGCCGTCTCAAAAGGAATCAGAGTTTGTGTTGCCAAGTTTTATTCATGAAAGCTATAAATTAGCTGAGAGTAATGGACCTGATTACTCAGAGATGGGGGAGGGAGGTTGTAACTCTGGTGTGAAAGACAGGGGTGAACAAGACAGTAAAGTGGACATGTTGAGTGAGAGCAGAAGTGATGGAGAGACTCCACTAAACATTTGCGCCGATGAGCGAATGCCGCCTCGGGGAGAGCTTAGTGGACAAGAGAGTAATGGAGATATGGAATCACCGTGGACTGGGATGTACAACGAAGTTACGCCTTCGGAGCCCTATGACCTGATGGCGCGCGAAAGCTGGGTGTCAGATGGTTCTGAAGTAGACACAGATGAAAAGCGGGATAACATAGACGATGACCTCCACTTTACGAAGAGCAGGCTGCACACCTGTTCACAATGCGGTATCAAGTATCCATCATTAAAGGAGTTGCGGACACATAAGGCTCTCTTACACTCCTTGCCCACCTGTTCCAATGGGAAGACCAGCTACAGCCGCCTTGTCACCGCGAGGAATATAAAAAAGGAGGAGAAACTAGAAGAAACTGTTTTAGaaaGAAACCTCTTAACAATGGATTCAAAGGAATCAATGGCAACGGCTATGCAACAAGTCTATGATGCTATTGCGGAAGCCAAGCCAGCTATAGAAACACTTGTCAAGCAGGAGACTAAGCGGAAGAAGAAGGACTACATCTGCCCGACCTGCAAGGTGGATCAGCTGACAGAGGTTTCGTTCAATGCACACCTCAAGATCCATCCATTGGAGTGCCTCACATGTGGAAAGTGCTTCTTCAAAAGAGTAAGCTTAGCACTACACATGAAAACGCATTTAGGAATCAAGAACTTTAAATGCGACCTATGCGAGAAGCGCTTTGTGACGCGGCAGAAGCTGACGGAGCACCGCAACGTGCACACGGGCCGCATGCCCGTCAAGTGCACCGTCTGCGATGACACTTTCAGACGCTACTCCAACATGGCGCAGCACAGGGACCGCCATCACTATCAGAAGAGGGCTAAGGTTCGCGACTTCGTGTGCCACTGCGGGGCGGTGTACCACTCGAGGGCGAAGCTCCTTTGGCACAAGGAGACTCATGACGCCAAGCCGAAGTCCTGTCTCTACTGCAGCGACAAGTTTGTGCACTCGTCCTCGCTGACGCGGCACGTGCGTCGCACGCATAACGCGCACTTCCTCTCAGATAAGGTTAAAGGGAAAGAGGTTAATGTGCCTTGTCCTGTATGCAAGCAGATATGCTTACGATCGAATTTACGCGCTCACCTGTTAATACATAGCGGCAAGAAGCCCTACTCGTgcgtcatctgcaacaagtccTTCACTACCAAGTGGAACCTTAAACTGCACCGTTGGACTCATATGAACCGTTCGGCTAAACCCTACAAGTGTCATCTGTGTAAAGGTGCCTTCATACGATACAGCGAATACATAGCACACATGCACTCGCACAAGTCTTTGAAGCCTTATACATGCAACTTTTGTGGCTGTCAGTTCGTCAGGAAGTACAACTGCCAACGGCATGTCCGGGAACACGAGATGTCGAAGAAGTACATATGCAAAGTGCCCGAGTGTGGGAAATCTTTCCACAGGAGTTATTATCTGTCGGAACATATGAAGGTACATAGTGGGGTGAGGCCCTTCTCGTGTAATATATGCGGTAAAACGTCGAGCAATAAGTCTAACCATAATAAGCACGTGAAGATTCATCACGCGAGAGAGCCCGTGGCCACAGAAGCGTAG
Protein Sequence: MDSRVQCPVCTLYLHSGMTLESHLDTHPKDQVIRALCSLSTKNTNYRSRTSTPSQSERSYQSRSRTPVADDSMRWMGSHQSLDSDKYWRRTPSRTKSTPLSNTSRNVTPDIRIGDVNFENSHIDRGGQYSENSYTIKLDKTQQTYVSNVRVAEFDQQYPYYSEQTEDREIKYSRSLDYNTIDSSGNAFTYNMPPIAQKAQSSDASTLIPPKKSSDLVKLVPKPELVKLLPKSNNIFFKNMGGVQYLAPGVNVVMPSTPFVQKNVQSNMIMSGNLPPPPTLNAKGETSPIVHNQYNQMGPGTFSPATTVVTQNSQIIYREMVHNLDGKPFISTLPNMLGGHDNIGKVTQSSSIYHQNVVVVDQFGNTSCMYANPQQILQKPCNVSVYPENSTLLSNELKKRSNDEADCNKTLIIEVSPINTPATGRISDASASASLVLSSDIDDKSKIEEKEFNSLEPIGSTKGLKILSNIKVEVPVQHKKSMLDTVMDLTVTNDQEYPESSVTPEKILPDLEDNNQSSIASGDSLVSNAFSVIKNVGNPPSYKDSPSKSSIVCSKIETDFSDSCPVPDLICNEKPSISPCSELSEQGDNSTDHIPLSPKADSSRNSLNVMNETVGGERKFPRKESKKNIIKLNSMYVKKHKKILQIKNLKTCLSHESSNKSEMEPLATSSICKTPENFSINKIHHTEKIESPKTSSLQTVSIDKLKGNDRSEFDADTEEQSMDIEPIAPSSLNDTHQFTIHVDVKVKEEFNTINEASFSNQDRPLQNIASMESLRPINVISYGSMVPGDFDNESNHRELLDLEATSKNKQFVNMMNENYFGDNIYADYFTPDKVESFDAGKESSFREGPKENMYIWGEPSQKESEFVLPSFIHESYKLAESNGPDYSEMGEGGCNSGVKDRGEQDSKVDMLSESRSDGETPLNICADERMPPRGELSGQESNGDMESPWTGMYNEVTPSEPYDLMARESWVSDGSEVDTDEKRDNIDDDLHFTKSRLHTCSQCGIKYPSLKELRTHKALLHSLPTCSNGKTSYSRLVTARNIKKEEKLEETVLERNLLTMDSKESMATAMQQVYDAIAEAKPAIETLVKQETKRKKKDYICPTCKVDQLTEVSFNAHLKIHPLECLTCGKCFFKRVSLALHMKTHLGIKNFKCDLCEKRFVTRQKLTEHRNVHTGRMPVKCTVCDDTFRRYSNMAQHRDRHHYQKRAKVRDFVCHCGAVYHSRAKLLWHKETHDAKPKSCLYCSDKFVHSSSLTRHVRRTHNAHFLSDKVKGKEVNVPCPVCKQICLRSNLRAHLLIHSGKKPYSCVICNKSFTTKWNLKLHRWTHMNRSAKPYKCHLCKGAFIRYSEYIAHMHSHKSLKPYTCNFCGCQFVRKYNCQRHVREHEMSKKYICKVPECGKSFHRSYYLSEHMKVHSGVRPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01143337;
90% Identity: iTF_01143337;
80% Identity: -