Pelw001340.1
Basic Information
- Insect
- Papilio elwesi
- Gene Symbol
- Hivep1
- Assembly
- GCA_029641285.1
- Location
- CM056337.1:5533881-5539949[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00012 0.011 16.6 0.8 1 23 143 165 143 165 0.98 2 8 0.0032 0.28 12.2 0.8 6 23 176 195 171 195 0.90 3 8 0.0017 0.15 13.0 0.0 1 20 422 441 422 443 0.95 4 8 2.2e-06 0.00019 22.1 2.0 1 23 1194 1216 1194 1216 0.99 5 8 1.9e-05 0.0016 19.2 3.9 1 23 1222 1246 1222 1246 0.92 6 8 8.6e-06 0.00075 20.3 0.9 2 23 1646 1667 1646 1667 0.97 7 8 0.00023 0.021 15.7 1.5 1 23 1673 1697 1673 1697 0.92 8 8 0.0011 0.093 13.7 2.6 1 23 1718 1742 1718 1742 0.93
Sequence Information
- Coding Sequence
- ATGCCTCTAACACAAGAAAAACGTTTGGATAGCAACTTCTCTAACAACAATGACCAAAGCTATCTGCATAAGAAGTTTAAAAAGATGGCGTCTACCATATCTGGTTTTGCTACAAATGCACCTAAGTGTGAAGACAATCGGCAAAAAGGAACAATCACTTTTGCCTGTAATACTTCCATCTCGAACGGGAGCATTGCAGCTGCACATCCTGAAATCGAGAAAATTAAAGACAAGCGAGATAATCAGAGCGCTGCCGTGGAAAATgatgtacaaattaattttaatgaagagaaCATTAGGTTAAGTGACGTTAATAATGTTGTTCAGGCATCTGGTAAAACCAGTTTTActgaagaatttttaaataagactGAAAACCTTGAAAATGATTTTATCACGGACTGCTACAGTGGAGGAACAGGGCGATATATGTGCCCTTATTGTAAATTATCGTGTGCCAAGCCGTCAGTTCTTCAAAAACATATCAGAGCTCATACTAACGAGCGACCTTATCCTTGCATACCTTGTGGATTCGCTTTTAAAACGAGGTCTAATTTATATAAGCATCGAAGATCGAGAACTCACGCTTTGAGATTGCAGGGTACAGATATATCCGGTTCAATGAACGAAGAGGATTTGTCTGGAGGATCAGAAAGCGACACGTCTATACCGCCAACATCTCTTTCTGATACCGGTTCAGATGCTTCAGTTATTCGATTGGACCATAATAGATATAATGAGATTTCTTCGCCTGAACTGACAAATGACAGCAACACGTCACCAGTAACAAGTTTCCCTTCTAATGATTTCAATAAATCAAAGGCAATCTACAAACCCAAGTTTAGAGCAGCATTTTATCAAGGAATTGATGAAAAAGATAAGATAAAGAAAACGATTTCTACGAATGCCGACTTTCTGACAGAACATATCTCTAAAATTATATCTGATAACGAGGCCATTGTGGATGTTATAGAAACtcctttgcaaaaaaaatacgGTAAAATCAAGCAAATTGCTgaaagtaaacaatttttaaatgaatctgAATTAAAACAGGACGCATCTCCTTTGAATTTAACAAAGAACAATATTATTTCTGATAATTCATTTCGAAAGAGATCTCATTCAGAAAGTTTTTCTCAAATTGACGACCATAAACATCCCCTTAACCCAGAAGGATCCATCATAAAGGATCTTCTCCTCAAAAGTAAGAATAATGCAATTATGATATCAGGAGAACTAATTGATGGATTAGGGGTGTTCTACGTTTGTCCATTGTGCCAAATAATCTTTAGAAGTGTTGATAATTTAGAAACCCAtagattatattattgtaagggcAGCATAGCAACAAACTCGGCTTCTATGAATGCTCCTCAAAAAGAAGTAAAGCTAGGCAGACCGGAAAACCTGTTCATAAGAAGTAATTCAATAAATGTTCGACTACCTGAAACACAACAATCACATAGTCCTAAATTAAGTATATCAACAAAATCGCCAGTTTGTAAAAGTAAGCccgataatataatttttaaacaggaATCAAACGAAATTATTGCACCATTGCCATCACCTGGTCCATTATTAGGCAATACAAGACTTGTCGATGCCAGGACACCTACGGAATTTCacagaaaaacagaaaatatcaaaattaagtcTAAAGAAGCTAGTCCTAAAAGAAGAATAGATAGCCATGCTGATACGTTCAGTCCAAAGTTATTAGAAAATGTATCACCACGCTCGGCGGATTTATACCCACAGTCAAAAATAAGATGTGTAGACACAAATACCGGAAATTTGCGTTCAATAGAGGAATTATCGTCGCATATTAGACATAATTCCACTTCACTTCAAATGTTTGGCGGCGAAGTAAAAATTGTCGATCACTCTGGTAGTACAACAACCTTACGTATTGAACCAAGTAAAAACCAATTGTCACCTATTTTAATACAACAGAATCTTTCGCCATCGAAATTTGCCGCTGATTCTGAAGCAAGCAGCGTAGTTGTGCGATCTGGACTACATTCTGGTGGAACTATAGTTCATAATCCACCTACACCCAAAGATGTCCTGAGCGCGCCGCAGCCACAAAGTGTTAGGATGTCTATATCAGCGGCGGGTGTTCAAAATTTACCTAATATTCACGATATTTCCCATTTTCCATTTCCACCTTTAAGTGCCATTACAGCGTACAATCCACTTACTCTGCCACCTCTTAGTCCTACCTCGTCGCCAAATGGTGCTACAACAATCTTTCATGGTGGAAAACTAATACCACATGTCCCAGGGATACCGGGTCCAAATACAGCGGCTGCCTTTATAGGAAGTGGCTCAGTATCCCAAAAGTTCATAAACTCTGATAAGCACCATCCAGTCTCAATTGTCGACAATTCCCAAGACTGCTTCCAAACAGGCAAAGGTACTATAGTGTCGAACTATGAAAAGTCACTTAAATCCAGAAACCTCAACTCGAGATCCTTAGCTTACGAATCTGATAATTATAATCAGAACCTGGAGACCTACAAGAGCGAAATACCACACTATATGACAAATATTCCctctattaaagtaaaaaacgtGGAAGAAACAAACAGCCATCCGATACCGAAGACTTATTCCTCAAATATTGTTCGTCATGTTACAGCAAGACAAGACTTAACAGTTAAAAGAAATTCTGATGGTATGGCCAAAATATCAGTtcttaaagaaaatacaaataccCTTGCCAagcatttaaataaagatttaacgGCTTCAATAACGAGCATTAATGTTGAAGTCAAGTCTGAAAATGagaatagaaattttaattttgaaaatcttATAACAAAAGCGGAAATATATAACAATCAAATACAAAGCTCCTCTGAAGTTCAGAAAAACACGAATGCTCAAGAATCAATTGAATCATCTATCAATAATGAAAGATCAGAGACATCCTACTTCCAGAAAAACTCCACATCACGACCTCCGATTACTAATAGAAAGCCAAAATTTTTGAGGCCGTCTACTTTGCCGTTAAAACCAGGCACCTTTACACCGAAACGACATCACGGTATTACCCCTAATGCGAATACTATGCCTTTAATATCACCTGAAACACCCCGTCCGGCAAAAGCTTACGGCCAGTTGTATTTAAATGGAAACGCATATACATATTTAGGATTAAAATGTTCAACAAAAGTTTTCTACTGTACAATAAATCGTCCTCAACCAACATATGTGCCAAACCAGCATTTCCTATCGATGTACAGCAATTGGCAGTTATTATCTGAGCTGACGCCAGACCCGCTGGGATTGTCAGCATCGTCTGCGATGTCTTTGTATGACTCACGTCATCGACCGCAAAATGTAACTACTGCAGTGATTAAGCAGGACCTCATATTGACTCATTCGTCACAATCGAATAAAAATTCGAAGGACAATCAACAGGCAATTACATCTATTGATACTAAAAAACAAGAAGAATCGAAACAACAGCCTTCAGATACAACAGCAACGCCTAAAAAGGAGTTAGCAGGTGGTTTTGAAAGTAACGAAGAATATACATATGTCCGCGGTCGCGGTAGAGGTCGTTACGTTTGTTCGGAATGTGGAATTCGCTGTAAGAAGCCGTCGATGCTAAAGAAACATATTCGTACACACACCGATGTTCGACCGTACACATGTACCCATTGTGCATTTagttttaaaacCAAAGGGAATTTAACGAAGCATATGAAAAGTAAAGCTCATTATAAGAAGTGCTGTGAATTAGGAATAAATCCAAATGAAGGCAATGAGGAAGGCTCCGAGATGACACATTGTTCAGGAGAAACTGACGACGAAACGGATTCCGACGGTGACGAGGGAAATGAAGGCGAAACGGAATCAAGCGATACGGAGCTGTACAAATCGCGTTTGCCAGAACATGAAGCTGCTCACTGTTTACTTTCACTGGGTGGTTGCCGCACTACCACTTCTGCAACACCGGGGCTGATAACAAGTGCTAGACCCACCACTTACCCGTACACCCCTGTTGGCATAGATAGCGTGACATCTGAATCTAATCTAGAAAATTCTCAGATGGCGAGAAAGAAATCTATAGACTCAAGGTTAGATGTGGATAATGAGCCGATGGATTTAAGCCGCAATGACGTCAAAGCTCCTAATTTACCAGAAATTCCGACTGCTAAAGAATCGAGCGTCTTAGCCTCTTTAGCATCGAATACTGCAAAACTTCCTCAACAACAAAGTCAGTGGACTAACGGAGAACCCATGTTACATACGTATTTAACTGAGCGGGCTCTGCTTGATTCCAAAATTAAACAAAGTCAACTCTCGTCTAACTTAAGCAAACTGAGAAAAATAGACATGGATAAATCTACGTTTATTGACGCAGACGAGTTATCAGAAAGCAACAATGGCCTCATCGTTAATAACATTACGACAACAATTACATCATCACAAGTAAACATCTCAAAATCGATTGCGTCAAGTGGCAGCGGTAGCGTTGTGAAATCATTATCAATTTCTAAAGAAGACATTACAAAAACCACGATTGATGCCTCTTATTCTGTTAGCTATAGTACAGAACCTAAACGAGCTAGAACTCCTAATAATAATTCTGAGAACGCCAAGCACGTCGTCTCTGAGTATCTTAAACAAGCCAGAATTAATCATATTAAGACTCGGGATGAAACGTACCAAAATCAAACGGATAACTCGAGTGACGAAAGCAATAGCAGTAAAATGAACATCGAAGAAAAGTTGAAAACCGATGACGTTACTATCTCGGAATCCGAATCGCTTAAAATGCCGTCTATAGATCATGAACCTGTGGCTCGAAAAGTTGTAATTGGGGTTGGAGGAGTTGCATTTAAGGTAACAAAAGGAAAAGAATTTGAAGGAACCCCATTTTCACCAGGAAGATTAATGGAAGATGGACGGAGGGTGTGtgacttttgtaataaaacattcaCTAAGCCTTCTCAGTTGAGGTTGCACCTAAACATACACTACATGGAAAGGCCTTTTCGCTGCAGTGTTTGCGCTGTGAGTTTTAGAACCCGTGGCCATCTTCAAAAGCACGAACGATCTGGTTCCCACCATAATAAAGTTTCCATGACCTCAACATTTGGAACGGCGACATCGTTCAATCCTCGACCATTCCGCTGCTCAGATTGTAATATCGCTTTTAGAATACACGGTCATTTAGCTAAGCATTTAAGAAGCAAAATGCATGTAATGAGGCTCGAATGTTTATTCAAACTACCATTCGGTACATTTACAGAGATCGAACGCGCTGGCGTAAGTTTAACAGACATTGACACAACGGATTGTGCTAGTTCTTTGGCAAGCTTACAGTCCCTTGCTCGTAAGCTGCACGAGAAGGATCCTACTAAATTAGAATATCGGGAACCTAGCGGCGTTGTGGCAATACCTCCTGCTGGCAGGGAATCTTCCGAAGATGAAGACGGCTCTGTGCCACTTGACAACCATTGTGATAGTGAAAGGGACAGTGAGATGAAGACAATGGATCTAAGTGACAGTCGGGATGTTGAGACAAGAGTTAACTATAGTGCCACAGATAATTAG
- Protein Sequence
- MPLTQEKRLDSNFSNNNDQSYLHKKFKKMASTISGFATNAPKCEDNRQKGTITFACNTSISNGSIAAAHPEIEKIKDKRDNQSAAVENDVQINFNEENIRLSDVNNVVQASGKTSFTEEFLNKTENLENDFITDCYSGGTGRYMCPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTRSNLYKHRRSRTHALRLQGTDISGSMNEEDLSGGSESDTSIPPTSLSDTGSDASVIRLDHNRYNEISSPELTNDSNTSPVTSFPSNDFNKSKAIYKPKFRAAFYQGIDEKDKIKKTISTNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFLNESELKQDASPLNLTKNNIISDNSFRKRSHSESFSQIDDHKHPLNPEGSIIKDLLLKSKNNAIMISGELIDGLGVFYVCPLCQIIFRSVDNLETHRLYYCKGSIATNSASMNAPQKEVKLGRPENLFIRSNSINVRLPETQQSHSPKLSISTKSPVCKSKPDNIIFKQESNEIIAPLPSPGPLLGNTRLVDARTPTEFHRKTENIKIKSKEASPKRRIDSHADTFSPKLLENVSPRSADLYPQSKIRCVDTNTGNLRSIEELSSHIRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPSKNQLSPILIQQNLSPSKFAADSEASSVVVRSGLHSGGTIVHNPPTPKDVLSAPQPQSVRMSISAAGVQNLPNIHDISHFPFPPLSAITAYNPLTLPPLSPTSSPNGATTIFHGGKLIPHVPGIPGPNTAAAFIGSGSVSQKFINSDKHHPVSIVDNSQDCFQTGKGTIVSNYEKSLKSRNLNSRSLAYESDNYNQNLETYKSEIPHYMTNIPSIKVKNVEETNSHPIPKTYSSNIVRHVTARQDLTVKRNSDGMAKISVLKENTNTLAKHLNKDLTASITSINVEVKSENENRNFNFENLITKAEIYNNQIQSSSEVQKNTNAQESIESSINNERSETSYFQKNSTSRPPITNRKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLISPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVTTAVIKQDLILTHSSQSNKNSKDNQQAITSIDTKKQEESKQQPSDTTATPKKELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCTHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNEEGSEMTHCSGETDDETDSDGDEGNEGETESSDTELYKSRLPEHEAAHCLLSLGGCRTTTSATPGLITSARPTTYPYTPVGIDSVTSESNLENSQMARKKSIDSRLDVDNEPMDLSRNDVKAPNLPEIPTAKESSVLASLASNTAKLPQQQSQWTNGEPMLHTYLTERALLDSKIKQSQLSSNLSKLRKIDMDKSTFIDADELSESNNGLIVNNITTTITSSQVNISKSIASSGSGSVVKSLSISKEDITKTTIDASYSVSYSTEPKRARTPNNNSENAKHVVSEYLKQARINHIKTRDETYQNQTDNSSDESNSSKMNIEEKLKTDDVTISESESLKMPSIDHEPVARKVVIGVGGVAFKVTKGKEFEGTPFSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGTATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPSGVVAIPPAGRESSEDEDGSVPLDNHCDSERDSEMKTMDLSDSRDVETRVNYSATDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495235;
- 90% Identity
- -
- 80% Identity
- -