Pelw002096.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio elwesi
Gene Symbol
-
Assembly
GCA_029641285.1
Location
CM056338.1:2377837-2385130[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 5e-05 0.0044 17.9 1.6 1 23 189 211 189 211 0.98
2 29 0.00091 0.08 13.9 0.9 2 21 244 263 243 264 0.93
3 29 2.4e-05 0.0021 18.9 0.4 3 23 295 316 293 316 0.96
4 29 4.7 4.2e+02 2.2 0.1 2 19 337 354 336 356 0.93
5 29 0.028 2.4 9.2 4.2 1 23 367 390 367 390 0.97
6 29 0.0091 0.8 10.7 0.1 1 23 407 429 407 429 0.96
7 29 0.00037 0.033 15.1 1.8 2 23 468 489 467 489 0.97
8 29 0.00016 0.014 16.2 4.1 2 23 530 552 529 552 0.97
9 29 3.3e-05 0.0029 18.4 1.2 1 23 602 625 602 625 0.97
10 29 0.0022 0.2 12.7 0.2 1 23 681 703 681 703 0.97
11 29 0.018 1.6 9.8 6.2 2 23 715 736 714 736 0.97
12 29 0.064 5.6 8.1 1.9 2 23 748 769 747 769 0.96
13 29 0.016 1.4 10.0 1.1 1 23 779 801 779 801 0.98
14 29 0.028 2.5 9.2 7.3 1 23 827 849 827 849 0.92
15 29 9e-07 7.9e-05 23.3 1.2 1 23 860 882 860 882 0.98
16 29 0.0015 0.13 13.2 0.7 1 23 890 912 890 912 0.95
17 29 6.4e-05 0.0057 17.5 0.2 2 23 932 954 931 954 0.97
18 29 1.1 96 4.2 1.0 1 23 972 994 972 994 0.91
19 29 1.1 95 4.2 4.4 1 23 1001 1023 1001 1023 0.97
20 29 0.0022 0.2 12.7 2.7 2 23 1034 1056 1033 1056 0.95
21 29 0.0011 0.097 13.6 0.3 1 23 1078 1100 1078 1100 0.97
22 29 6.7 5.9e+02 1.7 5.9 2 23 1143 1165 1142 1165 0.94
23 29 0.0013 0.12 13.4 0.3 2 23 1181 1202 1180 1202 0.95
24 29 0.06 5.3 8.2 4.8 3 23 1210 1230 1208 1230 0.96
25 29 0.012 1 10.4 0.8 2 23 1241 1263 1240 1263 0.95
26 29 2.9 2.6e+02 2.9 5.4 2 23 1280 1298 1280 1298 0.88
27 29 1 90 4.3 2.0 2 22 1302 1322 1302 1322 0.94
28 29 0.22 20 6.4 0.6 2 23 1371 1392 1370 1392 0.93
29 29 0.00038 0.033 15.1 0.3 2 23 1403 1425 1402 1425 0.97

Sequence Information

Coding Sequence
ATGATGGCCGACAACTGTGTAGGGAGTGAGAAAGAAAGGAGACCGGCTTCGCTCTCATCCCTACTCCGTGCTGTTTACTGGGTTTACGAAGGAGATGGACTACCAGATAAGATATGCTCAGAATGCATTCAGAAACTAAGCAGCGCTCATATATTCAAGCAGCAGTGCGAGAGATCGGATCAGGAGTTGAGACGGAACTATGTACCGCCCCCTGGTTTCAGCGCATTACCCTCGCCCACTAACAGGCAGAGCAGCGATTCGGCGTTCTCCAATAATACAGACGTATCCAGTAAAACTCAGACCACGCCCTCGACGATAGAAACAAAAGTTTCTCCGGTCAGCCGTAGCAGAAAACGTAGCTTGGAAAGTATCGACAATACGTCATCCAGCAGCCAATCCCATGACTATCGCCCCACCTCTACTAAACGGGTCGCGGAACTGCGGGCTTCGGAGAAAAGGCCAAAGATATCCGTAAACTCTTCTTTCGTAGACTCAGATTACGAAGACAACAGCGGGTCCCAGTGTTCCGTCGAAACCGACTCCGATGAACCGATGAAGAGCGAATTCAAATGCAAAACATGCGGCAAACAATTCTCTTCTAAGAAAGCTGTGAACGCGCATTCCAAAGTGCATTTAAGGAAATCTTATACAAAAAACGCTACGGTCAACGGACCGCAACCTGTCGAAAACGAAGAAATGGTAGACGCGAACGATGTCGAGGATAAGCTGGAATGTCAGAAATGTAATAAGAGAttcaagttaaaaataatgttgaaacGCCACCTGGAGACGTGCTTGAAAACACCACCCAAGTCGCCAATGAAAGAGTTGCTAGTGTCGCTGGAGCCGATAGACTCTGCTTCCCCACAGAACAAGCTCGACTGCGAAATGTGTACGACTAAGTTTAAAACAGTCGAAAACCTGGAGAAGCATATGAGGGTAGTGCACGCGGCAGTTCTCAAACGGGACAAATACGAGAAAATAATCGGAAACAGTAGATCCACCGTCCCTTGCTACTTCTGCGCGCAACCATTTGATGACTATAGCCTTTACATTAAACACTTTGACGAGTGTTCAGAGAAGCACGATGTGATTATGTTCACTTGCCCACTATGTCGGAAGTTTCTGTCTAAAAGGAGTACGTATTttcaacatacaaaaaaaatgcactTTGCTGTGTGTGTCGACAAGAGCGAAGACAAATCTAAGGAAGCAATCTTCGAGTGTCGCATGTGCAGCAAGAAATTGGCGACGCAAGAAGAGCTCGTAAGTCACCTCGCCGGTCATATGTCTAACATGGATGAAGAGGAACCAACAAAAGAGACCACTTGTGAAAGCCCTGTGGACAATGTGTCAGATTCAACAAGTTACTTGAACTCTCATGTGTCTTCTGGGCCTCTGAAATGTAGCATGTGCGAGAAACGATTCACCTACAAAAAGGCCCTGGTCACACATGAGCAGAAGCACTTGAATGGAGAAATAGAGATAAAAGCAGAGCCACAGGAGAAGGACAAGTCCAGCAGCCTGCTGAACGAGTCCTACCATCAGTCAGAGTCAGAATCTAGCCAAGAAGAGACAGATGACAAAACTTGCGATATCTGTGAAAAGGAGTTTTCTTACAAGCGTCAGTTGATCCACCACAAGCGGACCAAACACAACATGAGCTCGGGCACGAAGCGAGCGAAGATCAACCTCAAAGACTGCACCGTGAAGTGTCTCATCTGCGACATAGAAATGAAAGTGAGCGCCATAAACGAGCACAACCAGAAACACACCACTGTTAACATAAAGCCTCGTAACCTGTACACTTGTGCGGAATGCGATGAGAAGTTCAAGAGCTGCAGCTCCTTGGCTACACACATCAAGCTAGTGCACAGACTGAAGCAGTCGCAAGTGCCGAAGCTGCAGCGCGCGGAATTGGCGGAtttttgtgaggtcgtcgtGACAAAGACGGAACCTCTGGCCATGGACCAGAGTCGCGACGACCTCGTGACGGTTCCGCCGGTGCACGAGTCCGCGCCACTGGTCAACCTGACCGGGTTCACCTGTCCCACGTGCGGGAAGCAGATGCCCACCTTGATATCCTTGAAGAGGCACGTCAACTGGCACTCCAATGTCGGCAACAACATCGAGAAGAAGCAGGAGTGCTTTGTCTGCAAGGAGACATTCCGGTTCCAATGCCACTACCGGCTGCACATGCGCGAACATTACAAGGACACGAACCTGGACCCGGCGCTGCTCACCTGCACTATCTGCAACCGAAAGAGCAAACACCTCCGCGCTGCTCAAGCACATATGAACTTCCACAAGCAGACGCGTTTTAAGAATAAGGACTACCAGTGCTCCATCTGCAAGAGAATCTTCCAGTTCCGAAAGGTGTATCTATCGCACATGGCGATACACTTCAAACGCGGCGAAAGCGTCAACAACACGGTGGTCGGCTGTGAGCTGGCTGCCGCCGCCGATAGAACCGGCGGACATATTTGCCACCACTGCGGCAAGGTGTGCGATTCAGAGAATTCGCTCAAGCACCACGTCGTATGGCACAAGTCGAAGACGTCGCTCTTCGGCGCCCGCCACGAGTGCAACATCTGCGGCATAATGTTCACCAACAAGAGAACGCTAGAGCTGCACATCCGAACTCACTACGAAGACGATAATGGCCCCTTTAAATGTCCGATATGCGGCAAAGGATTCATCGACGAAGTCTATCACAGGAAACACGTCAAGGGACACAACTTTGACAACCAATCCCACCAGACGAGGATAGCGAACCTCAGGAAGGACAAAGTGAAGTGTCCGATTTGTGACCGATTCTATCCCGACTTGGTGAAACTCATTCGCCATCTGCGGCGGACGCATCCCGAGAGCAAAATGATAAAGAACGACCCCGACGCGCCCCAACCGAGCTACTTCTCGTGTAAATTGTGCGCCAAAGTTTTCTTGGACGAACGCAGGCTGCAACACCACGAGGAGGCTCACTTGAGGAAGCCGGAGTTTTTCAAGTGCAAGTTCTGCAGCAAGAAGACTATATCGTTGAAGAATCACCGGGTTCACATTAAGGCACACTTAACACAAAAGTATCTCGATGAGCCCCTCAAATGCATGCACTGTGACGAAACTTTCACGCGGGGATACGATCTGCACTACCACCTGCGCGACGCGCACGACATCAACGAGACGTGGATAGCGGAGCGCACAGAGAAGACGCTAAACGGACCGCTCAAAGAGTTCCAGTGCTCCATCTGCCTTAAGATATTAGCAAGCAAAGGCAACTTCGAACGGCACATCGACTACCACAACTCGTTGAGATGTAACTACTGCTTCGACTACTTCAGTTCGCTGAGGTTCCTGGAGGGCCACCTTGCCTTCAGCTGCGAGAAGAAAAAACTCATCGGTGACACGGAGGTGTACCCTAAGAAAGTGAAGTGCCATATCTGTTACAAGGCTTTTCATTTACAAGTAAAACTGGACTGTCATCTGAGGACGCAGCacaatattaaagtttgtaaaGAGGTGTCTGAAAGTAAGAAGGACATAGTGTGTGATTATTGCTTCAAAGCATTTGAGAATGAGTATGCTCTGAATACTCATAAGTCTTACCACCGCACGATCGGGTACTATGGCTGTCTGTACTGCAACAGGAAGTTCAACACGCTGACGCTGttcaataaacataaaaatcatcaTTTCTCGCAGCTTAACGTCGACAGCCCGACTAAGTGCGAGCATTGCGATGAAACTTTTGTCGCGTTTAGGGAGATGATATACCATATGAGGGACGTCCACGGAGACGATAAAGAATGGATCGTAATGCCCAAGGAGTCGACGGAGGAGAAGTGCCATATTTGCAACAAAATATTCTTCAATCTCCACAAACACTTGGCCTACCACGAAGAGAATAGATGTAAAAAATGCTCAGAGTATTTCTACTCTCAGATCGACTACGACAATCACCTGTGCACGATAGAGAGCGAAGACGAAGTGGAGGATAAGAACGAAAGCGAACTGAGACCAATGTATGCGGAGTGTGCGTTTTGCTTCAAGCCCACGACCAAAAAGAACTCGCAGCGACTGCACGACAGCATCCACAAGGTGTCCGGGTCCATCTCCTGCCGCTTCTGCCCATTCAAGTTTAAAACTATTGACGCGTTTAACATCCACGCGTTCTCCCACCGGAGCAGGAAATACAATAAGAAGCCGATAAAGTGTCGGCAGTGCGGCGAGAAGTTCGTGCGCTACGGCCCCTTCATACGGCACATCAAGACGGTGCACAAGTCGAAGCAGAAACTGCACTACCGCGCTAATGTACAGCCGGAGCCGTGCGTCGTGTGCGGTGACCACTTTCCCAACCTGCACAATCACTACCGAGCTCATCTTCAGAACCAGTGCCAGTTGTGTCGCAAGTACTTCACTTCATATAAGGTGTTTTCATTGCACGAATGTGATAAAGAGGATTCCGATCCATCGAAGGTTTTCACCTGTGACGAAGACCTCCTGGCTCTTATCAGGTTGTACACGCCCAAAGACGAGAAAGATGACGAGAAATTCTACGGACAAAGCGATCACGAGGACGAGATGGAGTTGGAGAAAAATATTGCTGATGTGGATTACACGACACAGGATGAAGAGAGTCAAAATTCTACGGACTTAAATATGCACCAGATGGTCTATGCGCCTATTATATCAGATGTTCTATCGCTTTACCAAGAAAAGGAACACGTAAACAGCGAACAACCAAAAGGTATTGTTGACTTGATTGATGACAACAGTCTGGACGGTGAAGATGTAGTTAGCGTCATTACTATAGACGATTGA
Protein Sequence
MMADNCVGSEKERRPASLSSLLRAVYWVYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSALPSPTNRQSSDSAFSNNTDVSSKTQTTPSTIETKVSPVSRSRKRSLESIDNTSSSSQSHDYRPTSTKRVAELRASEKRPKISVNSSFVDSDYEDNSGSQCSVETDSDEPMKSEFKCKTCGKQFSSKKAVNAHSKVHLRKSYTKNATVNGPQPVENEEMVDANDVEDKLECQKCNKRFKLKIMLKRHLETCLKTPPKSPMKELLVSLEPIDSASPQNKLDCEMCTTKFKTVENLEKHMRVVHAAVLKRDKYEKIIGNSRSTVPCYFCAQPFDDYSLYIKHFDECSEKHDVIMFTCPLCRKFLSKRSTYFQHTKKMHFAVCVDKSEDKSKEAIFECRMCSKKLATQEELVSHLAGHMSNMDEEEPTKETTCESPVDNVSDSTSYLNSHVSSGPLKCSMCEKRFTYKKALVTHEQKHLNGEIEIKAEPQEKDKSSSLLNESYHQSESESSQEETDDKTCDICEKEFSYKRQLIHHKRTKHNMSSGTKRAKINLKDCTVKCLICDIEMKVSAINEHNQKHTTVNIKPRNLYTCAECDEKFKSCSSLATHIKLVHRLKQSQVPKLQRAELADFCEVVVTKTEPLAMDQSRDDLVTVPPVHESAPLVNLTGFTCPTCGKQMPTLISLKRHVNWHSNVGNNIEKKQECFVCKETFRFQCHYRLHMREHYKDTNLDPALLTCTICNRKSKHLRAAQAHMNFHKQTRFKNKDYQCSICKRIFQFRKVYLSHMAIHFKRGESVNNTVVGCELAAAADRTGGHICHHCGKVCDSENSLKHHVVWHKSKTSLFGARHECNICGIMFTNKRTLELHIRTHYEDDNGPFKCPICGKGFIDEVYHRKHVKGHNFDNQSHQTRIANLRKDKVKCPICDRFYPDLVKLIRHLRRTHPESKMIKNDPDAPQPSYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCSKKTISLKNHRVHIKAHLTQKYLDEPLKCMHCDETFTRGYDLHYHLRDAHDINETWIAERTEKTLNGPLKEFQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKVKCHICYKAFHLQVKLDCHLRTQHNIKVCKEVSESKKDIVCDYCFKAFENEYALNTHKSYHRTIGYYGCLYCNRKFNTLTLFNKHKNHHFSQLNVDSPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIVMPKESTEEKCHICNKIFFNLHKHLAYHEENRCKKCSEYFYSQIDYDNHLCTIESEDEVEDKNESELRPMYAECAFCFKPTTKKNSQRLHDSIHKVSGSISCRFCPFKFKTIDAFNIHAFSHRSRKYNKKPIKCRQCGEKFVRYGPFIRHIKTVHKSKQKLHYRANVQPEPCVVCGDHFPNLHNHYRAHLQNQCQLCRKYFTSYKVFSLHECDKEDSDPSKVFTCDEDLLALIRLYTPKDEKDDEKFYGQSDHEDEMELEKNIADVDYTTQDEESQNSTDLNMHQMVYAPIISDVLSLYQEKEHVNSEQPKGIVDLIDDNSLDGEDVVSVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_01143279;
80% Identity
-