Basic Information

Gene Symbol
-
Assembly
GCA_029641285.1
Location
CM056359.1:3714121-3716409[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 8.9 8.6e+03 -2.6 0.0 22 34 228 240 226 243 0.83
2 5 2.2e-07 0.00021 21.8 0.0 3 45 261 305 259 306 0.92
3 5 1.9e-09 1.8e-06 28.4 0.4 2 45 313 360 312 361 0.94
4 5 8.8e-07 0.00084 19.9 0.0 1 41 365 405 365 407 0.95
5 5 1.2e-05 0.011 16.2 0.0 3 43 417 459 415 462 0.89

Sequence Information

Coding Sequence
ATGAGtcttaaagattttatttttgaatacacTGATAATGATAATCAATTACGAGATTTTCAACAGTTCAGTTCGGTCTTTGACTTTATTGGCCCTTCGACTAGTGCATCAACGTCTCAAATTGCTTCTCCCATGACCAATCCATGCACTGCGGAACCAGACTATTCTAAAATAGACAAAGCGTTATCTCTGAACAAGCTAGCCGACGAAAAGTTACGTAGACTGGAAAAACTACTCACCTTACGATTAAATGAGTGtgatcaaaaattaaaaagtattgagttctgttataaaaagaataagtaCTTTGACAAACATgaatcatttaaatatgttagcTGTGGAAAACcctattttaaagataaagcaAATTTTACACCCCCACATAATAAAGACACTATGACAATGTTGAATAATGGAATGTATAACTTTTCATCTATATCTCCTGTTCCTGGATGGACAGTTAGAGACAAAAGTCAATTTATTACTCTGATTACTAAAGTCTCTCAAGATCTTCTTAAGAAACGGATTGAGGCAAAAATTACTGAGTTAAATCGTGAAAACAAGTTACAACCTAGCAATAAACTTGACAAAAAAATAGAAGCCTTAAAACAAGAAATTGTTAATGTTAACAAAAAGACATGCATCCAGGAAGCAACTTTACCTATCAATGAGGAATATGATTGGGATTATATAGCTTCTGAATTAAATCATCGCCATGCTGCACAAGAATATCAAAGTCTatggaaattatttttgcatcCTACTATTAACAAAAGCGGATGGTCCAAAACTGAGCATACATCATTACAAAAAATTGCCTTCAGTAATAACTTCCAGGATTGGGATTTTATTGCCAAAAAACTTGGGACAAATCGCACTGGTTATCAATGCTTTGTTTATTTCCGCACTAACATGAACAACACATTCACTGGTCAAAAATGGACAAAAGAAGAAGAGGAATATCTGAAGAGATTAATTGATTATTATAGAGAAGATAAATATATTCCTTGGGGTAAAGTGGCAGCATCAATGGAAAATCGAACTAAGATACaggtatacaataaatataatagactAATTATGCAAAGAAAAGGAAGATTTTTACCCGAAGAAGATGCAGTAATTCTCACTTATGCAGAACAGTTTGGGCTTGATTTTAAGAGAATGACAAAGTATCTCCCAGGTCGTTCATTATCACAATTGCGTATACGTCATCAAATTTTAGCAAAGCAAAGAATTTCAACGGTGTGGACTGTAGAGGAAGATAATAAACTACTTAAATTACTAGCAAACAAAGAAACACCTACCATATATTCAGATCTTACGAAATATTTCCCTGGCAAAGATAGAATGCACATAAGAAGTAGACATATGACATTAGTAAAATGGATGAAAATTCATCCTAACTCTGATGTCTCAAGAGCACCACGCCGGGGTGCCCGCCGCTTATGTCATGGGCAAGCTTTGGATAACAACTTACACAAGGCAATTGAAAATCTAAAGAAACGAATTCAATCAGAAGTAGAAGATCGCAAATGTAAAAAGGTTACAATCAATTCACCAGAAAATATTATCGAAGATGCTATTATGGTGACATTAGTAAATCAGATATTAAGAGATGAAGAAGCCAAAAAAATGCAAGAGTCTCAAAATGAAGTACTGGAATTTTTAGAAGATGACAATGTTTTATCCAAAAATTTAAATGCAACAAACTTGAGAAAgctccttattttatttaaatctaaattgaaCAAAAGCAAACTGGCCAATAGCAAGTTGTGTGAAAGTTATCCTGACTTAATTGAAGGTGAAAAAGAAGTGTGTCTAGTTAAAATGAAATCCTATTCAAGAAAAGCCAATGAAAGGATGGTTTTAAAAAATGCTCCAGATATATTTGGGAcacaaatattagaaaatttagaGTATGTTTTGCCTCCACATTATGCAACTATAATTGGTTGTAGACAATTAATGGCATGGGTttctgataataaaaaaaataaagtatgtgATATCAATTTGAATGTGATGTTGAGAAGAAATGATCTATTAAAAGaacatttctttcttttagtggAAAGGTTTAATTCTCTTTTCTTGTGGCCCATGTTGCTTTCTAATGAAACCCCACATTTAAACAAGTTGGGACATGAGAATGCTGCACATACAAGGAAAGCTTTATGTGACCCTGTAAAGACAATTGAAGTAACTTTTTGCGAGAAGGTGCCAGCCCTTTCCCATAATCATATTGTAGTAGAAGAATTGGATAGTCATAAAGATAAATGA
Protein Sequence
MSLKDFIFEYTDNDNQLRDFQQFSSVFDFIGPSTSASTSQIASPMTNPCTAEPDYSKIDKALSLNKLADEKLRRLEKLLTLRLNECDQKLKSIEFCYKKNKYFDKHESFKYVSCGKPYFKDKANFTPPHNKDTMTMLNNGMYNFSSISPVPGWTVRDKSQFITLITKVSQDLLKKRIEAKITELNRENKLQPSNKLDKKIEALKQEIVNVNKKTCIQEATLPINEEYDWDYIASELNHRHAAQEYQSLWKLFLHPTINKSGWSKTEHTSLQKIAFSNNFQDWDFIAKKLGTNRTGYQCFVYFRTNMNNTFTGQKWTKEEEEYLKRLIDYYREDKYIPWGKVAASMENRTKIQVYNKYNRLIMQRKGRFLPEEDAVILTYAEQFGLDFKRMTKYLPGRSLSQLRIRHQILAKQRISTVWTVEEDNKLLKLLANKETPTIYSDLTKYFPGKDRMHIRSRHMTLVKWMKIHPNSDVSRAPRRGARRLCHGQALDNNLHKAIENLKKRIQSEVEDRKCKKVTINSPENIIEDAIMVTLVNQILRDEEAKKMQESQNEVLEFLEDDNVLSKNLNATNLRKLLILFKSKLNKSKLANSKLCESYPDLIEGEKEVCLVKMKSYSRKANERMVLKNAPDIFGTQILENLEYVLPPHYATIIGCRQLMAWVSDNKKNKVCDINLNVMLRRNDLLKEHFFLLVERFNSLFLWPMLLSNETPHLNKLGHENAAHTRKALCDPVKTIEVTFCEKVPALSHNHIVVEELDSHKDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143044;
90% Identity
-
80% Identity
-