Pelw021000.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio elwesi
Gene Symbol
jarid2b
Assembly
GCA_029641285.1
Location
CM056366.1:10455894-10472312[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-18 2.3e-15 57.2 0.0 7 89 850 929 845 929 0.91

Sequence Information

Coding Sequence
ATGAAAAGAAGGAAAGTTCAAGCACAACGCAAGTTTGCACAAGGTGTATATATTCCTCCAAGTAGTCAAACTACCAATATCGACAAGGCTACTAATCCTGCAATACATAAGGATAATGAGATTAGAAGCCATATCTTTCACagtagtacatcagctaaaagtCTTCTTGACCTCATAAGTTTTCAAAATTTACATAAACATAGAGAACCTATTGTTCTGCTAGAGAGATTAAGACATTATCCAGACCATCTTCAGGCATCATCATCTATAacatcaaaattatataatataagtgaACTAAAACAAGTAACTACAGCGTTTAAACATAATATGTGCCTTAGGTCTAAGAAAAAATTGGCCAAATTTGTTAAAAGGCTAAGAAGTAAACATATTTCTAGTCTAAAGAATAAAAGGCCACTAAAGCTTAATAAAGACCCATCGAGCTTAGAATCAATAGATTCTTGCAATGAAGATGACAAACCTTTAATGTACCTTGCAAAAGAAGAGCAAAAGAATAAAGCAGCGAACAAGATATTAAATCCACTTACTGTAAAAGACAATGGGAAGAAAGTAAGTTTTGACATAAGTTCCCGTGGAAATGCACCAATTGCTGTTTATGAATCCAAACATAAAATTGGCCAAGGATGTGCCCCGTCCTGTCATGGATACCCAAGATGTAAAGatatattaaaaagGAGAACAATTGTCCATACTCGATCCcatggaagggctgcagttgaTACTCGCGGAGTTGTGCAGAAAAATGCCCCAAGACCTGGTCAGCTGCATTGCAGTCAATCAATGCTAAAAACAGATAAAGCGAAAAGACTACGCCTGCGCACGCGCTCGAGTCTACGGTTGGCAGCGGATGCCTGTGAATCAGTAAATGGAGAGCTCCAGGATGTATCGGGCTGCAGTAGCTCAGTGCAGAAGACAGATGAAACAAAGAAGACCGGTTTACGTACGCGGCGTTCTGTTCGTTCTGCGGATGATGCATCTGAATCAGGGCAAGAGGAATCAAAAACTGGACAACAGCAATGCAATCCCTCGGTGCAAAATACAGGTATTGCTGAGATCAAGAATGTTCTTAGTAAAGAAAACCCACTGGAAGTGCTCAGCCAACCATCATTATCCAGCAATAAACTGACAACAAATTCAgTGGCTTCTATATCTGAAATCAATTCCTCCGCCAAGTCTCGTCCATCACCTCCGCGACTTCCTAAAAAAATACCTTCAAATTCAACACAAGTATCCACAATCCAACCTGTACGGGGAGCCCAGCCTATCATTGAAACGGAACTTCCTTCTACCTGCTCAGAACTCATTTCGGTTGCAGACTTTTCACCTAAATCATCGCAATTCAACTCTATTGTTGAAGGAACACAATCAGTACCTGAAAATTCTGATACAGATATAAAACTTGTAACCAGATCTTTGGTAGTCTTATCTCATGTGGCTGAACGAAAAATGTCGATTTGTGAAGCGACTGTACAGCCAGTAGAGGAAGACAATATTGACGATCCACCGGTTGACAAATATCTAAATGAACCATTAATCTCCAGACGGTTCCGCAACATCCCTTGTGATAAAGTGAGTAAAATAAATCAGGAGAAAAGAAGTACTACTAAAATGCAAACTTCTGGCGCTGTTGTATATTGCGAATCGAATGATACATCGACTAAAACGAAAAACCGCCGTGTCCATTGCCCAtctaaaaactacaaaaatatgaaagatGTGGTCTATGCAGATCCAAAAGATCTAGTAGGCCGATGTGAACGATGCGACTATTGTGCATTTATCGACAAAGTGCAGTGTGTGTCAAATATGTTTAAGATACAATACTGTCGAAAGATCATTCAGTCAAAAATTTATGGATTTGGTGCTGAAGACGAGGAATCCGTGAAAAGTGGTGGTTCCTACATACCAAGACAAAAGTACCGCCATGAGGACGAAAAAGACCTAAGTACTGAATTTGATACACAAACATGTTACTTAATTTACGATAAAGATTGTGATTATGTTGTCGAAGTAAAAAGAAATCGGTATGCTAATCAGGTAACCCGAATCGTAAGTGCTAATATTGTtccaaaaaaactatatactaAAATCATGACAGTTAGTGCATTCGATGGTAACCGACTTTTggatgatataataaattttgttatatcaAGAAAGTCTAATGCCACAATTGAAGCTGGCTTAGATTTCGCCAATGGCTCTAAGTCTGGACCGAGTGCGCATGCTCTAAATGGAAAACACAATGGTATAACTGAGGAAAAAACTCCCGCAATACTTATACCGATGCTCAAAGCGAGCCAAACAAATGCACCAATCTTCTATCCTACAGAACAAGAATTTGGGGACCCCATTGcttatttcaacaaaattatgCCAATCGCTGCTAAATTCGGATTATGCAAAGTTGTGGCTCCGAATACTTTTAAACCAAAGTGTATGTTGGACGATGAGGTGCGTTTCGAAGTCACAAACCAATACATATCACGCTTGTACAAGCGTTGGGGTCCAGCGTCGAGAGAACTTTGTGCCATTAAAGCTTATCTAGCATCTCAAAGTGTAATCTTCAGCCGGCCGCCATTGCTTGAAGGAGTTGAGGTCAACTTAccgaaattatattatttggtaCAATCGTGGGGCGGCCTAAAAGAAGTTATCGAAAAGAAGCGATGGACTAAAGTAGCTGAAGAAATGAATCTTACGAAAACGCCAAAAATAGAAGTAAAACTGGaccaaatatatgtaaaatatattttgccttATGACACAATGACAGATGCCGAGCGAAACGATCTAATGAAAGCAGTTGATAAATACTGGAGCAAAAAATACCGAAAAATGTTACACCGTGCTATAAAGCCATTACATAGACAGAAACGTCTTTTAGACGAATCTGAATCATCTGAAGAAGATATCGATGAAGATATTTATGTATCAGGCGCCCTAGCTGAGGCAGAAGACTGCATCAGTAATGGCAGGCAAATGAATCTGCTTACTTTTAAAAAGGTAGCAAGTAAATGTATGGAAATGTACATTCCTAATTGCAATATGAATACTCTGACTGATATAGAACAAGTTTATTGGAAAATGGTTCTTCTCGCAAAAGATCACATTTGTGTCAACAACGCATCAATCGACACCGGCGAAGAAGGATATGGTTTTACTAAAGATCAACGCGACTCCTATGGGAAACATCCATGGAATTTGAAGGTATTTAGTCAAAACAGTGGGAATGTTCTAAGATTTTTAGGACCAGTACTGGGAGTAACTGTCCCTACTTTGCATCTCGGGATGGTTTTCTCAACCAGCTGTTGGCATCGAGATCCTCATGGCCTTCCCTGGATTGAATACATGCATACTGGACCTGGCAGAATTTgGTATGGTATTCCAGATGAACAAAGTGCCAACTTTCGGAAAGCAGTCGAATTATTGTGTCCAACATCATGCCAAAATAAATCAATCTGGCTTCCGTCTGATATTACCATGATTCCACCGGACTTGCTTCTGCAGAATAATGTATCCATGTCTAGAGTTGTACAGGAGCCCGGGCAGTTTATCGTGGTTTTCCCAAAAGCCTACTCGTGTTCCATTGCAACTGGATACACAGAATCGGAGAGTGTGTATTTTGCCACTAATTCATGGTTGGAAACAATTGATCAAGTATTTCAAGAGGTTCGCGATAGCTGCGAGCCAACAATGTTCTCGTTAGAACACTTGCTTGTGTCGGCTGCACGTGACCCGCGAGCTCCTATCGAAGTTCTGAGATTGGTTAAGATGCACCTAGGGAAAGTGTTACGGGAAGAACTGGCGAATCGCAATGCCCTGGCCGCTTATAAAATTAagAGCCAAAACCCACAACAAAGTAAGCATACTCGCAAGCGGCCTGCAGGAGCGTGGAATGTTAGAGATCAAGACGAATGCGAGATCTGCCAAGCGACCTTGTACCTCTCCAAAGTGCGAGGATTGACTGACAAGAAGAGGTCGGTGTGCCTTCAGCACGCTCTTCAGTTGTTGGAGACAATGACGAACAAGGACCGTGATTTAACCTGCGTCGAGCTGGAACTGTTCTTTTCTGACACTGAATTAGAAAGAATTATAACGAAAATCAACAATAGAATATAA
Protein Sequence
MKRRKVQAQRKFAQGVYIPPSSQTTNIDKATNPAIHKDNEIRSHIFHSSTSAKSLLDLISFQNLHKHREPIVLLERLRHYPDHLQASSSITSKLYNISELKQVTTAFKHNMCLRSKKKLAKFVKRLRSKHISSLKNKRPLKLNKDPSSLESIDSCNEDDKPLMYLAKEEQKNKAANKILNPLTVKDNGKKVSFDISSRGNAPIAVYESKHKIGQGCAPSCHGYPRCKDILKRRTIVHTRSHGRAAVDTRGVVQKNAPRPGQLHCSQSMLKTDKAKRLRLRTRSSLRLAADACESVNGELQDVSGCSSSVQKTDETKKTGLRTRRSVRSADDASESGQEESKTGQQQCNPSVQNTGIAEIKNVLSKENPLEVLSQPSLSSNKLTTNSVASISEINSSAKSRPSPPRLPKKIPSNSTQVSTIQPVRGAQPIIETELPSTCSELISVADFSPKSSQFNSIVEGTQSVPENSDTDIKLVTRSLVVLSHVAERKMSICEATVQPVEEDNIDDPPVDKYLNEPLISRRFRNIPCDKVSKINQEKRSTTKMQTSGAVVYCESNDTSTKTKNRRVHCPSKNYKNMKDVVYADPKDLVGRCERCDYCAFIDKVQCVSNMFKIQYCRKIIQSKIYGFGAEDEESVKSGGSYIPRQKYRHEDEKDLSTEFDTQTCYLIYDKDCDYVVEVKRNRYANQVTRIVSANIVPKKLYTKIMTVSAFDGNRLLDDIINFVISRKSNATIEAGLDFANGSKSGPSAHALNGKHNGITEEKTPAILIPMLKASQTNAPIFYPTEQEFGDPIAYFNKIMPIAAKFGLCKVVAPNTFKPKCMLDDEVRFEVTNQYISRLYKRWGPASRELCAIKAYLASQSVIFSRPPLLEGVEVNLPKLYYLVQSWGGLKEVIEKKRWTKVAEEMNLTKTPKIEVKLDQIYVKYILPYDTMTDAERNDLMKAVDKYWSKKYRKMLHRAIKPLHRQKRLLDESESSEEDIDEDIYVSGALAEAEDCISNGRQMNLLTFKKVASKCMEMYIPNCNMNTLTDIEQVYWKMVLLAKDHICVNNASIDTGEEGYGFTKDQRDSYGKHPWNLKVFSQNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPGRIWYGIPDEQSANFRKAVELLCPTSCQNKSIWLPSDITMIPPDLLLQNNVSMSRVVQEPGQFIVVFPKAYSCSIATGYTESESVYFATNSWLETIDQVFQEVRDSCEPTMFSLEHLLVSAARDPRAPIEVLRLVKMHLGKVLREELANRNALAAYKIKSQNPQQSKHTRKRPAGAWNVRDQDECEICQATLYLSKVRGLTDKKRSVCLQHALQLLETMTNKDRDLTCVELELFFSDTELERIITKINNRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-