Pdem002267.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- ZFX
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000003.1:1116559-1124287[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 6 5.8e+02 1.8 0.3 2 23 6 27 5 27 0.94 2 13 0.014 1.3 10.1 1.2 1 22 1310 1331 1310 1333 0.89 3 13 0.0001 0.0098 16.8 2.3 2 23 1436 1457 1435 1457 0.97 4 13 8.3e-05 0.008 17.1 1.8 1 23 1463 1485 1463 1485 0.98 5 13 0.0058 0.56 11.3 2.4 2 23 1492 1513 1491 1514 0.95 6 13 1.9 1.9e+02 3.4 1.6 5 23 1527 1545 1525 1545 0.97 7 13 0.01 0.98 10.6 2.7 2 23 1551 1573 1550 1573 0.96 8 13 0.025 2.4 9.3 0.1 2 23 1590 1610 1589 1610 0.96 9 13 2.4e-05 0.0023 18.8 0.7 1 20 1616 1635 1616 1638 0.92 10 13 0.003 0.29 12.2 2.4 1 23 1646 1668 1646 1668 0.99 11 13 0.0055 0.53 11.4 7.2 1 23 1674 1696 1674 1696 0.98 12 13 8.8e-06 0.00085 20.2 1.4 1 23 1702 1726 1702 1726 0.97 13 13 0.001 0.097 13.7 5.1 1 23 1732 1754 1732 1755 0.95
Sequence Information
- Coding Sequence
- ATGGATTCGAGAGTTCAGTGCCCTGTGTGCACTCTATACTTACACAGTGGAATGACTTTGGAGTCTCATTTAGACACACATCCAAAGGATCAAGTTATAAAAGCTTTATGTAGTCTGTCAAGTAAGAATACCAATTATGGGAGTCGTACTTCAACTCCGTCGCAATCCGAGCGCTCCTACCAGAGTCGATCTCGTACTCCAGCCGCGGACGACGGCATGCGGTGGATGGGCTCCCACCAGAGCTTGGACAGCGAAAAATACTGGAGAAGAACACCaagtagaaataaattaacaccACTTTCTAACCCATCAAGAAATGTCACACCGGATATAAGAATTGGTGAtgtcaattttgaaaatagtCATATTAACCATGGAGGTCAGTATTCTGATAATTCTTACACAATGAAACTAGATAAGACTCAGCAGACATATTCATCCAATGTACGAGTAGCAGAATTTGACCAACAGTACCCATATTACCCTGAGCAAAGTGAAGATCGCGAGATTAAATATTCTCGCAGCTTAGACTACAATGCAATTGATAGTTCAGGTAATGCTTTTACTTATAACATACCTCAGATTGCTACGAAAGCGCCTGCACCAGTTGCATCCACACTTGTACCACCGAAGAAAAGTAGTGACCTCGTTAAGTTAATGCCCAAACCCGAGTTTGTTAAGTTACTACCAAAGTCTAATAATATTCTCTTCAAAAATATGAGTGGAGTACAATATATAGCACCAGGTGTTAATGTGGTGATGCCATCATCACCCTTTGTCCAGAAAAATGTTCAAAGTAACATGATAATGTCTGGTAATTTACCACCAAATACAGCACTGAACACCAAAGGTGCAGCTCAAGCTATTATTCCCAATCAGTATAATCAAATGGGACCCAGTACTTTCACACCGGGCACTACAGTGGTGACCCAAAATTCACAGATTATATACAGAGAAATGGTTCACAATTTGGATGGTAAACCATTTATTTCAACTATGCCTAACATGCTTGGAGGTCATGACAACATGGGCAATGTAACACAAAGTAGTTCTATATATCAGAATGTTGTAGTAGTTGACCAGTTTGGTAATACCTCATGTATGTATGCAAACCCTCAACAAATATTGCAAAAGCCTTGCAATGCTTCCATTTATCCTGAAAactcattattattatctaaCGAACAAAAGAAAACACCAGATGATGTGGATTGTAATAAAACTCTAATCATTGAAGTTAGCCCCATTAACACTCCGGCTACTGGAAGAATTGGTGAtgtcaattttgaaaatagtCATATTAACCATGGAGGTCAGTATTCTGATAATTCTTACACAATGAAACTAGATAAGACTCAGCAGACATATTCATCCAATGTACGAGTAGCAGAATTTGACCAACAGTACCCATATTACCCTGAGCAAAGTGAAGATCGCGAGATTAAATATTCTCGCAGCTTAGACTACAATGCAATTGATAGTTCAGGTAATGCTTTTACTTATAACATACCTCAGATTGCTACGAAAGCGCCTGCACCAGTTGCATCCACACTTGTACCACCGAAGAAAAGTAGTGACCTCGTTAAGTTAATGCCCAAACCCGAGTTTGTTAAGTTACTACCAAAGTCTAATAATATTCTCTTCAAAAATATGAGTGGAGTACAATATATAGCACCAGGTGTTAATGTGGTGATGCCATCATCACCCTTTGTCCAGAAAAATGTTCAAAGTAACATGATAATGTCTGGTAATTTACCACCAAATACAGCACTGAACACCAAAGGTGCAGCTCAAGCTATTATTCCCAATCAGTATAATCAAATGGGACCCAGTACTTTCACACCGGGCACTACAGTGGTGACCCAAAATTCACAGATTATATACAGAGAAATGGTTCACAATTTGGATGGTAAACCATTTATTTCAACTATGCCTAACATGCTTGGAGGTCATGACAACATGGGCAATGTAACACAAAGTAGTTCTATATATCAGAATGTTGTAGTAGTTGACCAGTTTGGTAATACCTCATGTATGTATGCAAACCCTCAACAAATATTGCAAAAGCCTTGCAATGCTTCCATTTATCCTGAAAactcattattattatctaaCGAACAAAAGAAAACACCAGATGATGTGGATTGTAATAAAACTCTAATCATTGAAGTTAGCCCCATTAACACTCCGGCTACTGGAAGGATTGGTGATGCAAGTGGAGGTTCATCTCTTGGACCATCATCAGGTATAGATGAAAATAGCAAATCAGAGGATACAGAATTGAAGAATGAATCAATTGGTGCCACAAAGGGTCTTAAAATCCTTAGCAATATTAAAGTGGAAGTGCCAGTCCAACATAAGAAAAGTATGTTAAATACAGTGATGGATTTAACAGGAACAAATGATCAAGAATATTCTGAGAGGTCTGTGACCCCAGAAAAAATTTTACCTGACCTAGAAGACAACAATCAGAGTTTTTCTGATGAGTGCACACAGCCTTCTGTAGCAAGTGGAGATAGTTTGGTGTCAAATGCTTTTTCtgtgataaaaaatgtagGAAATCCTCCATCATACAAAGATTCGCCTTCCAAGTCTAGTATTGTAGGTAGCAAAATTGAAACTGATTTTTCAGATAGTTGTCCTGTACctgatttaatatgtaatgaGAAACCTTCAATTTCTCCATGTAGTGAGTTGTCTGAACATGGGGACAATTCTACAGATAATGTGCCATTGTCACCTAAAGCAGACAGTAGTAGAAGTAGTCTAAGTGCTATCAATGAAAGTGTAGAAGAAAGTAAATTCCAAAAGGAACCAAAAAAGAATACTCTCAGATTGAACAACATCTATGTTAAAAAGCATAAGAAGATTCTTCAGATAAAAAACGCAAAGACAAATTTAACCACAGAATCTTCCAATAAAAATCCAATAGAGCCTCTACCCTCGTCTTCTATTTGTAAGACAccagaaaattttattataaataaaatacatcatACAGAAAAACTGGAAAGTCCAAAGACCAGTTCCTTACAGACTGTGTCTATTGAGAAATTAAAGGGTAATGACCATAGTGATTTCGATGCTGACACAGAAGAACAGTCCATGGACATAGAACCTATAGCACCTTCTAGCTTGAATGATTCCAATCAATTTTCAATGCATGAGGTGAAAGTTAAGGAAGAATTTAACACCAGTAATGAGGGTGGTTTCAGTAACCAAGGTAGGCCATTACAGAATATACCACAATTGGAGAGTCTTAGACCcattaatgtaatttcttatGGTAACATGGTACCTGGAGATTTTGAAAGTGATTCAAACCATAGGGAACTGTTAGACTTGGAGGCTTCATCGAAGAACAAGCAGTTTGTTAATATgatgaatgaaaattattttggtGACAACATTTACGCAGACTACTTCACCCCAGACCGGGTTGAATCTTTTGAAGCTCAAAAAGAGTCTGGTTTTAGGGAAGGTCCAAAAGACAATATGTATATTTGGGGTGAGTCTTCTCAGAAGGAATCTGAATTTGTGTTACCAAATTTTATTCACGAGAGCTACAAGATAGCTGAGAGTAATGGGCCTGATTACTCAGAGATGGGTGAAGGATGTAACATTGCTATGGCCGACCGATGTGAACAGGACAGTAAAGTGGACATGCTGAGTGAGAGTAGAAGTGAGGGTGAGACTCCATTGAACATTTGTGCTGATGAAAGAATGCCACCCCGGGGAGAGCTTAGTGGTCAAGAGAGTAATGGAGATATGGAGTCGCCATGGAGTGGgaTGTACAATGAGGTCACGCCTTCGGAGCCCTACGACTTGATGGCACGCGAGAGCTGGGTGTCAGATGGCTCTGATGTAGACACAAATGAGAAAAGGGATAACAtTGAGGATGACCTACACTTTGGTAAGAGCAGACTGCACACGTGTTCACAATGCGGTATCAAATATCCTTCTTTGAAGGAACTGCGAACGCATAAGGTTCTGTCACACTCCCTGCCAACTTGCTCTAACGGGAAGACCAGCTATAGTCGCCTTGTCACCGCTAGAACTATCAAAAAGGAGGAGAAGTTAgatgaaaatgttttagaaaGGAATCTCTTAACGATGGATTCAAAAGAATCAATGGCGACAACTATGCAACAAGTATACGATGCTATTGCGGAAGCTAAACCTGCTATAGAAACATTAGTTAAACAGGAGACAAAGAGGAAGAAAAAAGACTACATCTGTCCGACATGCAAGGTAGATCAGTTGACGGAGGTGTCGTTCAATGCTCATCTCAAGATACATCCGTTGGAGTGTCTCACTTGTGGGAAATGCTTCTTTAAAAGAGGAAGTCTAGCGCTACATATGAAAACACACTTAGGAATCAAGAATTTTAAATGCGATCTGTGCGAGAAGCGTTTCGTGACGCGTCAGAAGCTGACAGAGCATCGCAACGTGCACACAGGCCGCATGCCCGTCAAGTGCACCGTCTGTGACGACACCTTCCGCAGATACTCAAACATGGCACAGCACAGGGACCGTCACCATTACCAAAAGCGAGCTAAAGTCCGCGACTTCGTGTGCCACTGTGGCGCGGTGTATCACTCGAGGGCGAAGCTACTCTGGCACAAAGAGACTCACGACGCCAAGCCCAAGTCCTGCCTCTACTGCAGTGACAAGTTTGTGCACGCCTCCTCTCTCACCAGACATGTACGACGCACGCACAACGCACATTTCCTCTCTGATAAAGTCAAAGGAAAAGAGGTTAATGTACCCTGCCCTGTTTGTAAACAGatATACCTAAGATCGAATTTACGTGCTCACCTATTAATACATAGCGGCAAGAAGCCGTACCCGTGCGTTATTTGCAACAAATCCTTCACAACCAAGTGGAATCTCAAACTACATAGGTGGACTCACATGAGCAGGTCCGCTAAACCATTCAAGTGCCATCTGTGTAAAGGTGCCTTCATACGGTACACGGAATACATATCACATATGAATTCGCACAAGTCTTTAAGACCTTACACGTGTAATTATTGCGGTTGTCAGTTTATCAGAAAGTATAACTGTCAGCGTCATGTCAGAGAACACGAAATGGCAAAGAAGTTTGTATGCAAAGTGCCAGAGTGCGGGAAATCATTCCACAGGAGTTACTACTTGTCGGAACATATGAAAGTACATAGTGGAGCGAGGCCGTTCTCGTGTAATATATGTGGGAAAACTTCAAGCAATAAATCTAACCATAATAAGCATGTTAAGATACACCATGCTCGGGAGCCGGTCGCAACTGAGGCATAG
- Protein Sequence
- MDSRVQCPVCTLYLHSGMTLESHLDTHPKDQVIKALCSLSSKNTNYGSRTSTPSQSERSYQSRSRTPAADDGMRWMGSHQSLDSEKYWRRTPSRNKLTPLSNPSRNVTPDIRIGDVNFENSHINHGGQYSDNSYTMKLDKTQQTYSSNVRVAEFDQQYPYYPEQSEDREIKYSRSLDYNAIDSSGNAFTYNIPQIATKAPAPVASTLVPPKKSSDLVKLMPKPEFVKLLPKSNNILFKNMSGVQYIAPGVNVVMPSSPFVQKNVQSNMIMSGNLPPNTALNTKGAAQAIIPNQYNQMGPSTFTPGTTVVTQNSQIIYREMVHNLDGKPFISTMPNMLGGHDNMGNVTQSSSIYQNVVVVDQFGNTSCMYANPQQILQKPCNASIYPENSLLLSNEQKKTPDDVDCNKTLIIEVSPINTPATGRIGDVNFENSHINHGGQYSDNSYTMKLDKTQQTYSSNVRVAEFDQQYPYYPEQSEDREIKYSRSLDYNAIDSSGNAFTYNIPQIATKAPAPVASTLVPPKKSSDLVKLMPKPEFVKLLPKSNNILFKNMSGVQYIAPGVNVVMPSSPFVQKNVQSNMIMSGNLPPNTALNTKGAAQAIIPNQYNQMGPSTFTPGTTVVTQNSQIIYREMVHNLDGKPFISTMPNMLGGHDNMGNVTQSSSIYQNVVVVDQFGNTSCMYANPQQILQKPCNASIYPENSLLLSNEQKKTPDDVDCNKTLIIEVSPINTPATGRIGDASGGSSLGPSSGIDENSKSEDTELKNESIGATKGLKILSNIKVEVPVQHKKSMLNTVMDLTGTNDQEYSERSVTPEKILPDLEDNNQSFSDECTQPSVASGDSLVSNAFSVIKNVGNPPSYKDSPSKSSIVGSKIETDFSDSCPVPDLICNEKPSISPCSELSEHGDNSTDNVPLSPKADSSRSSLSAINESVEESKFQKEPKKNTLRLNNIYVKKHKKILQIKNAKTNLTTESSNKNPIEPLPSSSICKTPENFIINKIHHTEKLESPKTSSLQTVSIEKLKGNDHSDFDADTEEQSMDIEPIAPSSLNDSNQFSMHEVKVKEEFNTSNEGGFSNQGRPLQNIPQLESLRPINVISYGNMVPGDFESDSNHRELLDLEASSKNKQFVNMMNENYFGDNIYADYFTPDRVESFEAQKESGFREGPKDNMYIWGESSQKESEFVLPNFIHESYKIAESNGPDYSEMGEGCNIAMADRCEQDSKVDMLSESRSEGETPLNICADERMPPRGELSGQESNGDMESPWSGMYNEVTPSEPYDLMARESWVSDGSDVDTNEKRDNIEDDLHFGKSRLHTCSQCGIKYPSLKELRTHKVLSHSLPTCSNGKTSYSRLVTARTIKKEEKLDENVLERNLLTMDSKESMATTMQQVYDAIAEAKPAIETLVKQETKRKKKDYICPTCKVDQLTEVSFNAHLKIHPLECLTCGKCFFKRGSLALHMKTHLGIKNFKCDLCEKRFVTRQKLTEHRNVHTGRMPVKCTVCDDTFRRYSNMAQHRDRHHYQKRAKVRDFVCHCGAVYHSRAKLLWHKETHDAKPKSCLYCSDKFVHASSLTRHVRRTHNAHFLSDKVKGKEVNVPCPVCKQIYLRSNLRAHLLIHSGKKPYPCVICNKSFTTKWNLKLHRWTHMSRSAKPFKCHLCKGAFIRYTEYISHMNSHKSLRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -