Pdem006748.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- Lip1
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000008.1:7818565-7823894[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-17 3.9e-13 49.7 1.7 40 84 2 45 1 69 0.78
Sequence Information
- Coding Sequence
- ATGCTTCTATACAGTCGCAAGAAAGTGCGGTACAGGCGCGACGGCTACTGCTGGAAGAAACGGAAAGACGGAAAGACCACTCGAGAAGACCATATGAAGCTCAAGGTGCAGGGGACAGAGGCCGAAAAGCGGTTCGATGCTTCTATACAGTCGCAAGAAAGTGCGGTACAGGCGCGACGGCTACTGCTGGAAGAAACGGAAAGATGGAAAGACCACTCGAGAAGACCATATGAAGCTCAAGGTGCAGGGGACAGAGCTTTAGCAACAATTGaagaaaatatagttaatGATATACTTCCTGAAGACGgacaatttaatttcacacAACTGGCAAGAAAATACGGACACCACGCGGAAGAATACAAAGTTGTAACCGAAGATGGCTACATTCTTGGATTGTTTAGAATACGCGGAAAGAATagaataaagaagaaaagacTACCAGTGTTAATAATGCACGGGCTGGCAGATTCATCAGATACCTGGCTTTTAAGAGGAAATCTATCCCTGGGCATTACATTAGCTACATCAGGATATGATCTTTGGTTCGGAAATATGAGAGGTAACAGATATTCTAGAAATCACGTCAGATTAAATCCTGATAAAGATGTACAGTTCTGGGATTTCAGCTTCCACGAAAATGGGTATTATGATCTACCAGCTGTGATAGATAGAGTTCTAAACGAGACCGGTTTTCAAAAGTTAAACGCGATCGGATTTTCACAAGgcaatactatattttatgtactatgTTCTACGAGACCTGAATACAATTCCAAGATAAATGTGATGATGGCTTTGGCGCCGAtatgttatttacaaaatgtccAACCGCCTCTATCGTACATTATATCAATTGCACCCGAGTTGTACGATTTCTTTAGTGCTGTGGGTGTAAACGAAGTAGCTAATGATAATTCACTACTCAATACATTAGCAAAAATTATCTGTACGTTACCAGACCTAGGATACGATATTTGCATTAAAGAAATCATGTTTCCATTTACTGGATACGACAGCGAGGAAATTGAACCTGACTTTGTGCCAACATTGATAGGCCATTTCCCTACAAGTACTGCTTTGAAAACTTTGTACCATTACGGTCAAGTTggatatagaaaaatatttgcacaATTTGACTACGGTAATGCAGGTAATCTTGAAAACTACAATTCAACAATACCACCGACGTATGATTTAAGTTTGGTTACCACAAAAATAGTGTTATACGTCGGCCTAAATGATAAACTATCCACAATTGATGATGTTCAGATTTTAAGATCCAAACTACCAAATGTTGTCCGTTATATTGTGAGTCCTAGATGGATGTGTAACCACGTCGATAACGTTTGGGGTAAGCACATGCATGATTATTTGTACCCATACGTTTACGATGTGTTGGAATCAAATTGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEAEKRFDASIQSQESAVQARRLLLEETERWKDHSRRPYEAQGAGDRALATIEENIVNDILPEDGQFNFTQLARKYGHHAEEYKVVTEDGYILGLFRIRGKNRIKKKRLPVLIMHGLADSSDTWLLRGNLSLGITLATSGYDLWFGNMRGNRYSRNHVRLNPDKDVQFWDFSFHENGYYDLPAVIDRVLNETGFQKLNAIGFSQGNTIFYVLCSTRPEYNSKINVMMALAPICYLQNVQPPLSYIISIAPELYDFFSAVGVNEVANDNSLLNTLAKIICTLPDLGYDICIKEIMFPFTGYDSEEIEPDFVPTLIGHFPTSTALKTLYHYGQVGYRKIFAQFDYGNAGNLENYNSTIPPTYDLSLVTTKIVLYVGLNDKLSTIDDVQILRSKLPNVVRYIVSPRWMCNHVDNVWGKHMHDYLYPYVYDVLESN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -