Pdem020505.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000030.1:812962-831084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-12 5e-09 36.3 0.0 1 38 150 188 150 194 0.91 2 2 4.3e-19 1e-15 57.7 0.0 1 43 355 398 355 400 0.95
Sequence Information
- Coding Sequence
- ATGTACGTTTTGTTACAGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCCCGGCCGCCGCGCCACCCTTACTGCAGCAGATGCTGCAATTACAGTTGCAGGCACAGACTCCACAGGCCATTGCACAGTTCCAGCAGATGTTGGCGGCGCTGGCGGCGCTGGGCAGCGGACTGGTGCCCCCGCCGCTGCCGCAGGCTTGGCTGATACAGCGGCTCGCGCAGACCAGACAACAACCAGACAGACTGGCTGAATGCGATAAGCCGCCAGCGCCGACGTCATCACCCATATCAGCTGAACAACCGTTGGACCTGAGCGCAAAGTCCACGTCCAGCACGAGCGGAACTCCACCCCCGGACCACAATAACTTGGATAATTCCAGATTAAAACGCGCGGTCTCGGACAATCCCAATAACGCGTCGCGGCGGACGTACTCCGAGGAGGAGCTGCAGTCAGCGCTGCGAGACATCCAGTCAGGCAGGCTGGGCACGCGGCGCGCCGCCGCTCTCTACCGGATACCACGCTCTACGCTGCGGAACAAAATCAACAAGTGCGGCATCCCCACCGACCCTGCGCATGACTCCGACCCCGACAGCGAGCCAGAGCGGTCCGACTCGCCACCTTCCGTCATACTTAAGATACCCACCTTCCCGCCCCCGGACGAGAAGAGCCCCTCCCCCGCGACACCAGTCACACCCATCACACCACTGATACCCCAGCCCCAGCCACCACTCAATCAGGCCTCGCAACTTCTCCTCCCGTCGGTCTTCGCCGACCCACCTTCCACGCAACACCTGTTTACGTCCCTCAGCGACGTTATAGCTAAAAGCATCAGCCAGAAATTCCAGCAGCCTCTGGAGAGGCCGCCGCAACCAGACTTGCCGTTCATGCGAGCGCCCGACAGGCACGTGTCGGTCATCAAGACGCCTCCCGACAACCAGAGGAACTACCCGGCGCCGAGCAACTCGCGTGCCGCCACCAACAACAACGGTCAGCCGGCAACCGGCGGCAAGGGCACGCGCCCCAAGCGAGGCAAATACAGGAATTACGACAGGGACAGCCTTGTAGAGGCTGTGAAGGCCGTACAAAGAGGCGAGATGTCGGTTCACAGAGCGGGCTCCTACTATGGGGTACCCCACTCTACCCTGGAGTATAAAGTTAAAGAACGACATCTAATGCGGCCGAGAAAACGGGAGCCGAAGCCGCAGCAAGAAGCGAAGCCGCAACCCAAGCCGCCGCCGAAGCCTCCTACAAAACCCTTTACTAACGGGCTCAACGGACCCGAAACTTATCCCTCCGGGTACCCATTCTGGGCGGGAGGGTTCGCCCCACCACCAGCGCCGGATCTTTACGCCTCGCACATGATGCGGCGACTACGCGACGAGGCGCCTCCCGCGAATGGGTCCTTCCTAGAGGGGATCATTAGATCGAGCCTGGAGAGGCCCTTGATCCAGCGGCTGGCTGAGCCGCGAGCGCCGATGGCGACGAGTGAAGCACCAAGTTTGCTACGGCGGCTGGCCGGTGAGCCCGAGGAGCCACCGCCCGCGCGCCGGCCCCGCATCGACAGCTCGGACCGGCAGCTGGCAGCGGAGATGCGTGAGGCGGTCCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCACCGGGCGggtcgccgccgccgccgcccgccgcgccgccagCGCCGCCTGATCACGTGTAG
- Protein Sequence
- MYVLLQSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRAVSDNPNNASRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPAHDSDPDSEPERSDSPPSVILKIPTFPPPDEKSPSPATPVTPITPLIPQPQPPLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRAATNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPPTKPFTNGLNGPETYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATSEAPSLLRRLAGEPEEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPGGSPPPPPAAPPAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01138881;
- 80% Identity
- -