Basic Information

Insect: Papilio dardanus
Gene Symbol: Mtf1
Assembly: GCA_013186455.1
Location: QDHC01004437.1:50894-56692[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 5.1e-06 0.0004 20.7 0.8 1 23 106 130 106 130 0.99

2 6 0.00076 0.06 13.9 0.2 1 23 136 160 136 160 0.97

3 6 5.8e-05 0.0046 17.4 0.5 1 23 166 190 166 190 0.97

4 6 8e-06 0.00063 20.1 0.6 1 23 195 219 195 219 0.96

5 6 1.7e-05 0.0013 19.1 3.4 1 23 225 249 225 249 0.98

6 6 0.73 58 4.5 2.9 2 23 647 670 646 670 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	5.1e-06	0.0004	20.7	0.8	1	23	106	130	106	130	0.99
2	6	0.00076	0.06	13.9	0.2	1	23	136	160	136	160	0.97
3	6	5.8e-05	0.0046	17.4	0.5	1	23	166	190	166	190	0.97
4	6	8e-06	0.00063	20.1	0.6	1	23	195	219	195	219	0.96
5	6	1.7e-05	0.0013	19.1	3.4	1	23	225	249	225	249	0.98
6	6	0.73	58	4.5	2.9	2	23	647	670	646	670	0.93

Sequence Information

Coding Sequence: ATGGCCGCATGGCTCGGTGACAGAGGTTCTTCCGATAACCTCGTACAAAGTAATATCTTAGCGgaagattttaatttgagcagtgacttaattaataattgccAGTCTTTTGACGATAGTTTCAGTGATTTTCATGTGCACAAAGGAATCAAAAGAGAAGACGAAAACGTCGCAACTTcagaaaacaaaattttagtaaCAGACTCTCGAGAAACATCGAGACACAATGAATCAATAcctgaaaaacaaaacattgaacacaaaacaaacattattaagAGCAAAAGAAAATTGGAGGAAAATAACTCTGCAAGATATAAATGTGAATATGATGGTTGCGAAAGGACTTACAGTACAGTCGGTAATCTACGGACACACATGAAAACACATAAAGGTGATTATAGATTTGTATGTCCGATACAAACCTGCAACAAGGCTTTCCTTACCTCATACAGTCTGAAGATTCACGTCCGAGCTCACACAAAAACTAAACCGTTTGTCTGTTCTATTGGAAACTGTAATAAAGCATTCAATACACTATACAGGCTAAAAGCCCACCAAAGACTACACAGTGGCGATACATTTAACTGCGAGGAAGATGGTTGCGCTAAATATTTCACAACACTAAGTGATCTCAAGAAACACATACGAACACACACACAGGAGAGGCCATACAAGTGCAGATCAGATGGTTGTGGTAAATCGTTCACTGCGTCACACCACTTGAAGGCTCACGGACGGACTCACTCTGGCCCAAGAAATAAAGCCACAATTGGAAGTGGCAGAAACTTTATCACGCCAATCGTATCAACATCCCTACCTCAAACACAACAGATCGAAGCCGAAACTCCCGCTGTTGAAATTATCGAAAACAtcgataaaacaaaaacgacAAACGATAGTATGAATTGGGACGGTCTTTTAGAATCCTTCTCCAAAATAACAACAGATTCTAACTCAAATGACGGCAGCTTAAACGATATGACACTCTTAAATCAACTGCCTAATAACAATGTCGATATAACAGAGCTGCTTTTAAGTAATCCAACTAACATCACTAAATTTAACGATGATAATATAGCTGTAGATTACGACTTTAATGCTCTAGACTTGCCCGATCttactaaaaaaactaataatactTGGGTTGATGTGAATAATTTGAAACCTGTTCCAATGACAGTGGCTGAGGAACGGAAAGTAGAAGTGAAATCTAATGCTATCGAACTAGCTTTAGCCAATGAAATAGAACTTCAGTCCCCTTGGGTCGATGTTAGCGCATTAGCtgcctctatacaaaatactCCAGttagtataaaagaaaaaacaccAGAGAGTATATTCACTCTGGCAACATTTGTCCCCACGCACATGCAGAGTTACATAGACCTAACATCAGAAGCACCTACTGCTAATATTACGTCCCAAACATTCGATCTCGACAGTCCAACTATACTTGACGTTAGCCCCAAAGTATTCAACGACAGTGAACTAGTATCAAATTTCGATTTTGGTGCACAAAAACTAGATTCAGATCTGGACGTTTTTCTGAAAGAAACAGAATTATCCGATGATAGATTTTTGAATACACCTTCACCATCGAGAGTTCAGCAACAGATTGAGATCAATCCAGCCAATTCCGTACTTTTTAATACAGATTTGGCTTTGGAAGATACTCTGCTGTTTGATAACGAGCCACCATCAGATATGTACGTTGTGAGAACGGAAAATATATTTGGGAAGAAACTTGTTAAAAGGAATCCTTTGGAGCAGCTTGCAGCTGACGTTGGCATCTGTTCTTGCAATAACTGCAACTGCAACCCTGATGGAGAGTGCAGAACCAACTGCGGAGAAAAGACTACAAGTGAAACTACAAAATCAAATTGTCCTGATGATACATGTTCTTGCGTCGATTGTAAATGTAATCACGCGGAAATGAAATGCGCTGTCGGTTGTGGAAAAGCAACTGATACTAATCATAACACCTTTCTACATTATCATAGAAGAcataataattctaatttgGAAGATTTAGGTGTTTATACGTTGCACGAATGTGAACAAACACCACCGATGAGCTTCgaagattttatttgttcgTGCCAAAGTGATAGTACAGGGTGTTGTAAAAAACCTAACGAATCAGTTGATTTGTCCAGTGATTGTTGCagtgttaaaaataagaaaatgtgTTGTGTgactatatgttttaaaaagttggaagcattcaaacaatttttatcggAGAACGATTTTGTTGAAGCTCTTAAAACGCACAATTTCAGCTTAACCGGTCATTAG
Protein Sequence: MAAWLGDRGSSDNLVQSNILAEDFNLSSDLINNCQSFDDSFSDFHVHKGIKREDENVATSENKILVTDSRETSRHNESIPEKQNIEHKTNIIKSKRKLEENNSARYKCEYDGCERTYSTVGNLRTHMKTHKGDYRFVCPIQTCNKAFLTSYSLKIHVRAHTKTKPFVCSIGNCNKAFNTLYRLKAHQRLHSGDTFNCEEDGCAKYFTTLSDLKKHIRTHTQERPYKCRSDGCGKSFTASHHLKAHGRTHSGPRNKATIGSGRNFITPIVSTSLPQTQQIEAETPAVEIIENIDKTKTTNDSMNWDGLLESFSKITTDSNSNDGSLNDMTLLNQLPNNNVDITELLLSNPTNITKFNDDNIAVDYDFNALDLPDLTKKTNNTWVDVNNLKPVPMTVAEERKVEVKSNAIELALANEIELQSPWVDVSALAASIQNTPVSIKEKTPESIFTLATFVPTHMQSYIDLTSEAPTANITSQTFDLDSPTILDVSPKVFNDSELVSNFDFGAQKLDSDLDVFLKETELSDDRFLNTPSPSRVQQQIEINPANSVLFNTDLALEDTLLFDNEPPSDMYVVRTENIFGKKLVKRNPLEQLAADVGICSCNNCNCNPDGECRTNCGEKTTSETTKSNCPDDTCSCVDCKCNHAEMKCAVGCGKATDTNHNTFLHYHRRHNNSNLEDLGVYTLHECEQTPPMSFEDFICSCQSDSTGCCKKPNESVDLSSDCCSVKNKKMCCVTICFKKLEAFKQFLSENDFVEALKTHNFSLTGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01141245; iTF_01148428; iTF_01144906; iTF_01144142; iTF_01145569; iTF_01139243; iTF_01147726; iTF_01143471; iTF_01141989; iTF_01142718; iTF_01149959;
90% Identity: iTF_01141245;
80% Identity: -