Basic Information

Insect: Papilio dardanus
Gene Symbol: -
Assembly: GCA_013186455.1
Location: QDHC01002842.1:2774975-2780162[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.5e-05 0.13 12.4 0.0 6 44 148 184 145 184 0.92

2 4 2.4e-10 5.7e-07 29.5 3.0 3 44 272 312 270 312 0.97

3 4 1.3e-10 3e-07 30.4 5.9 3 43 372 411 370 412 0.95

4 4 0.0012 3 8.0 1.7 3 43 428 470 426 471 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.5e-05	0.13	12.4	0.0	6	44	148	184	145	184	0.92
2	4	2.4e-10	5.7e-07	29.5	3.0	3	44	272	312	270	312	0.97
3	4	1.3e-10	3e-07	30.4	5.9	3	43	372	411	370	412	0.95
4	4	0.0012	3	8.0	1.7	3	43	428	470	426	471	0.87

Sequence Information

Coding Sequence: ATGCTTATACCGAACTACATCGGGCCATCGTTCACAACGTCTAAAAGAGGAAAACCTGTGATCAGTTTCGGTTTATACAAATTCAGTAAACAACGAGAGGTAGGAAAAAAAGTAAGATGGGTATGTCAGAATGTACGATTCGGATGTAACGCAGCATTTTACACTTCAGGAGATGaaattgtaaaagtatttGGAGAACATAACCATGAGATGGGCGAAAAACCGGTAAAAAGCGATCGCAAGAACAAAcGTGAAGATTTAGTGCAATGTGTGCCTACTCGGAAAGGGCATCATATATTGTTTAAAGGTTATACTTACACTTTCAAGAGTAGGTTGCAGTGTGGCGCGGAACAGTGGTGTTGTTCGTACAGACAGAAAACTGGTTGCATTTCAATGATAAATATGCAGGCGTACGaaGTTCTACCGGACTGGGTTTCAATATACTTTCTGAAGTTATCTGAAAATGAACAGAAATGTAATGTATGTGAAGCAATTATTGAAACGGATGAAAAATCTCTAATACTTTTAGAAcatattaaagaaattcaCAAGGATGTTCATGATATACATAAAAACGGTACTGAAGGTGCTGTCGGATTTCAAATTGAATTCCTACATTTGTTGAAAGAAGATGATCCAAAAAGTCAACCGATGGTACTCGGACAGGTTTGTGAAGCAATGATAAGTGATGATAAAAATGAATCTAAGAATGTGGAGAGCGGAGATTTGCAATTCGTTTTGTTACCGACAAAAAAGAAGACAAGTAAAAAGGGACCGAATCGTATGATACATGAGAACCGAAGACGAAGCTGGGTTTGGaagtattttaagaaattaagcAATATAATATACCGTTGCACGTTATGTGATGTCGTTTTATCTATAAAGGCatgtaatacaaataatatgaaCAGGCATGTACGTGCAAGACATCCTAATATATACAAAACTGAAGTAGGAGTTGCAACTGATTCCGACACCACAGAAGGTGATATTCCTCTTCAGACCTCATCTCCTAAAATCAAAGAGGAAGAATCAAACATAATTGTTGAGGAATCAGAAATCGATGATGCATATTATGAGGCTTTAGGCCAGAAGCAACGACGTAGTTGGGTATGGTCGTATTTCACACGCGTGTCCAAAACATTAGCGCAGTGTAAGCTTTGTAACCGAAACATCTGCCATGGTGGGAACGCGACCGGCAACATGAACAGACATCTAAAGATGGTACATCACAAGACCGGAGGTGAGAGGAGCTTTACTATAGAGGACAATAGTTGGGTTTGGAAAGTATTCGATTGTATGGAAGATGATTTCTATTCATGTAAAATATGTCAATACAAATGTATGAAGTTTGAAGACATGGAGAGAAGCGTCAATTGTATTATGGaacatttgaaaatcgaaCATGGCGTCGTTTCCGGCGATCAGATCGTTATTGATGCTGATTATTGA
Protein Sequence: MLIPNYIGPSFTTSKRGKPVISFGLYKFSKQREVGKKVRWVCQNVRFGCNAAFYTSGDEIVKVFGEHNHEMGEKPVKSDRKNKREDLVQCVPTRKGHHILFKGYTYTFKSRLQCGAEQWCCSYRQKTGCISMINMQAYEVLPDWVSIYFLKLSENEQKCNVCEAIIETDEKSLILLEHIKEIHKDVHDIHKNGTEGAVGFQIEFLHLLKEDDPKSQPMVLGQVCEAMISDDKNESKNVESGDLQFVLLPTKKKTSKKGPNRMIHENRRRSWVWKYFKKLSNIIYRCTLCDVVLSIKACNTNNMNRHVRARHPNIYKTEVGVATDSDTTEGDIPLQTSSPKIKEEESNIIVEESEIDDAYYEALGQKQRRSWVWSYFTRVSKTLAQCKLCNRNICHGGNATGNMNRHLKMVHHKTGGERSFTIEDNSWVWKVFDCMEDDFYSCKICQYKCMKFEDMERSVNCIMEHLKIEHGVVSGDQIVIDADY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01145401;
90% Identity: -
80% Identity: -