Pdar015085.1
Basic Information
- Insect
- Papilio dardanus
- Gene Symbol
- retn
- Assembly
- GCA_013186455.1
- Location
- QDHC01003387.1:271488-278975[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 4.1e-16 59.2 0.0 17 89 87 157 62 157 0.94 2 2 4.3 9e+03 -2.8 0.0 25 38 277 290 241 294 0.73
Sequence Information
- Coding Sequence
- ATGAGCGTGCGGCGGCGCGTCTCGAAAGCGCGCCATTGGCCGGCCGCAGGGCCGAGGGCGGGAGCGGGCAACGATCTGACTTACGGCGCGACGCTCGCCCGCGAAGCTCGTTTCCTCGTCGTTGGTATCGCTTTGATGTGCGCTGGCTCCTTGTCTTGTCTTGTTCCTAACCTAAAAAATCTAGACTTCATAAAATCAATTGTGTCTCTTGTTACTCAGGAGAATGATACTCCTGAATTGTTTCTCCTGTCATTTCCAAGTACACCAATAAATCGGCTGCCGATAATGGCGAAGTCTGTGCTGGATCTATACGAGTTGTACAACCTGGTCATAGCTCGCGGCGGCCTCGTCGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGCTTGCGATTGCCCTCCTCCATCACCTCTGCAGCGTTCACATTGCGCACACAATACATGAAGTATTTATACGACTATGAGTGTGAGAAGAAGAACCTGTCAACACGCAGTGAACTGGACGCGGCAATCGAGGGCAATAAGCGAGAAGGCCGACGTGCTTCAGGACAGTACGAGGCGCAAGCGGCACTTGCTATGCCTTCGCTGAACCGCGGTATGTCACTGTCGATGCCGCTGGCGCAGCCGCTGGCGCTGCCGCTGGGCGCGGTGCCGCGGCTGCCGCTGCACGCGCCTCATCTACATTCGCACGACATCGAGTACCGCGTGCGCGAATACATGAAGATGATACAACAGCAACGAGACCTTATTAGAAATGGTTCCGAGTCACCTCCTAGCACCGGCGGTGGTACAATGATGTCGCCGCGAGAGGCCGCGCTGAGCGCCATCGACGTTTCCCGCCTCACGCTCTGGTCCCtctacaacaacaacaataacaacaacaGCCCGCAGCCGGACCTCGAGCCGCAGCGGTACGAGTCTGGGCCAAGGCCCAAAGGTCAAAATGTCACCGTATCACGTGATGCGAACACGGGCGACCAGCAGCTGGTGGTCTCGATAGAACTGAACGGAGTGACGTACGAAGGAGTCCTCTTCCCCTCGCAGAGCAGCGGGCAGCCGGCGCACAGGCAAATGGTCtcttaa
- Protein Sequence
- MSVRRRVSKARHWPAAGPRAGAGNDLTYGATLAREARFLVVGIALMCAGSLSCLVPNLKNLDFIKSIVSLVTQENDTPELFLLSFPSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYEAQAALAMPSLNRGMSLSMPLAQPLALPLGAVPRLPLHAPHLHSHDIEYRVREYMKMIQQQRDLIRNGSESPPSTGGGTMMSPREAALSAIDVSRLTLWSLYNNNNNNNSPQPDLEPQRYESGPRPKGQNVTVSRDANTGDQQLVVSIELNGVTYEGVLFPSQSSGQPAHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -