Pcly024036.1
Basic Information
- Insect
- Papilio clytia
- Gene Symbol
- vib-1_1
- Assembly
- GCA_018247735.1
- Location
- DWGS01023104.1:1208-3130[+]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.52 6.6e+03 -1.4 0.1 92 134 48 90 34 107 0.68 2 2 1.5e-19 1.9e-15 59.0 0.0 1 126 120 232 120 238 0.91
Sequence Information
- Coding Sequence
- ATGGATCAGCCCTCTTACCCCTACAGCCGATATCCCCAAGACGACCAAGAAGCATACGACAGACCTGCGCACCCAGAAATTGTCTCACATCACGGCTACCCAAACCTGAAGAGGTCTTTCTCTGAAGCAGAACCACCTGCTTACCAGGAAATTGTCCAGGATCTCCGTGACGACAGCTCCAAGATGACAGCCAGCCACGAGCACAAGCTCTTGGCCTTCAAGAGGACACAGGATAAACACACCATAGTTGACCAGCAAGGCCGCATGCAACAACTAGAGTTGTCCGCTCAACTCCACGGGATGTTCTTCCTTTCCGAAATGCCTGCGAATACATCAGATGGCTCGCTCAGACAGCCTGAGTTGACCTGTTACCGAAGAAATCTATTTCAAATCAGCGGCACTCTTGTTACACCACGAGGTCAACTGTCTGTGATCACCGAATCTGGCGAGACTGTTGCAGTCAGCAACATGGAAGTTACTATTTCTGCCATTGAGTCTGTTGATGGCAACCCGGTCCGATTAATCGTGATTCCGTGGAAAACCCCTCCACCAAACTCACCAGAGACAAACCAAACCCCAGATCAAGAACCGCAGTCTCTGCCCCTAATTCCTTTCCAGGACGATGGGACAGAATCTGATGGCGAATATGCCGTGTACCCCATTGGGTGGCGACGCCTTCAATTCCGGATCTCATATCCAACTTGGGGAACACCGCCGGCCCAGGTGCCCTTGGGTCATATCCCAACCTCCGGTGCAGAGAGTTACCCTGCGGCATCAATGGGCCCTCTGGCTGGTACGGCCAGTTTCCCTGCTGAATCACAAGGAATGCCCATCCAATCATCGATGGAACCCCCTGTGCCCATATCCATGGTAACGAATGATTCGGAGCACCCACCAGTCCGATCCCAGTATACTTATGATATGCAGACAACGACTGGCCCTCCGCAGTTATCGATACATACCACTCCGCTCGGAAGCCATGACCAGGCCATGAACATCCCTCGTTACGTCGATAATCCAAGGCCGTTGAAGAGCCCACGACACATGAGTCATCCCTCGATAAGGAGCGCGGGCTCAGTAGCGAACACCGACGCCTCTCCAGAATATCGATACGCCCCGTATGCCCCCGTGAACTCGAGTTCTAGCGAGGTTGCGCAGCCTAGTTACAACCCAGAAACATCTGGGCCACCTTCAGTGCCTGCAAGGGACTACTACGCCCCTGCACATACCTGGACATCAGCGTCTGGGGAGCATAGTACGAATCTGGCATATGCCAGCACTGCTGAGTCGCGACCATACCCTTTCCCTCAAGACGAGTACAAGAGTACACCTGCGGGATCGTCGCCAACGAAGACCGAATCGAGCCAGCCGCAGGGTTCGTCTGTCTATAACGGAGCCGCGAGAGGCTCTTTTGATGCCATGCATCAGTATTCCTGGAATGGGAACTAG
- Protein Sequence
- MDQPSYPYSRYPQDDQEAYDRPAHPEIVSHHGYPNLKRSFSEAEPPAYQEIVQDLRDDSSKMTASHEHKLLAFKRTQDKHTIVDQQGRMQQLELSAQLHGMFFLSEMPANTSDGSLRQPELTCYRRNLFQISGTLVTPRGQLSVITESGETVAVSNMEVTISAIESVDGNPVRLIVIPWKTPPPNSPETNQTPDQEPQSLPLIPFQDDGTESDGEYAVYPIGWRRLQFRISYPTWGTPPAQVPLGHIPTSGAESYPAASMGPLAGTASFPAESQGMPIQSSMEPPVPISMVTNDSEHPPVRSQYTYDMQTTTGPPQLSIHTTPLGSHDQAMNIPRYVDNPRPLKSPRHMSHPSIRSAGSVANTDASPEYRYAPYAPVNSSSSEVAQPSYNPETSGPPSVPARDYYAPAHTWTSASGEHSTNLAYASTAESRPYPFPQDEYKSTPAGSSPTKTESSQPQGSSVYNGAARGSFDAMHQYSWNGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -