Basic Information

Gene Symbol
SWI3C
Assembly
GCA_018247735.1
Location
DWGS01044066.1:926-1986[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-13 1.7e-09 39.1 0.0 3 44 49 90 47 91 0.96

Sequence Information

Coding Sequence
AACCATACAGATGCTAACCCCAAGGCTAAATATGACCTTTGTCCTAACTGTTTCACCGAGGGTCGTCTCCCCGCCAATCATAACAGCAACATGTATGTCAAGATGGAGAACCCCACCTACACATCGACCTTGGACCGCGATGCTCCCTGGACGGATGCCGAGATCCTGCGACTCCTTGAAGGCCTCGAGCGATTCGACGACGATTGGGGTGAGATTGCAGAGCATGTGGGTACCCGCACACGGGAAGAGTGTGTTCTCCAATTCCTTCAGCTGGATATTGAGGAAAAGTATCTGGACTCTGAGGCTCCCATCAGTGCCCCGACTGGCCTGTCTCTCCTTGGTCCCCAACAAGGACAGCTTCCCTTCAGCCAAGTTGATAACCCCGTCATGTCTGTCGTCGGTTTCCTTGCTAGCTTGGCAGACCCAGCCAGTACAGCAGCGGCCGCAAGCAAATCCGCCGAAGAGCTCAAGCGCAAGCTCCGCAAGCAGCTCGACGGTGACAAAGCCGATGACGATTCCCAGGCCAACGGTGACAACAAAGCCAAGAGTGACTCTATGGATATCGACCTCCGACAAGAGACCACGATGACTACAACCACAACTACGACTACCACCACCACCACAAAGACAAACGCGCTTGCATCCATTCCTCTGGCTTCGATAGGGGCTAGGGCTGCCGGATTTGCCTCTCATGAAGAACGCGAGATGACTCGCCTAGTTTCCGCTGCTTCAAATGTGACGCTACAAAAGCTTGAATTGAAGCTCAAGTATTTCGACGAGATGGAGGCCGTCCTGCGGGCGGAGCGTCGAGAGCTTGAACGGGCAAGACAGCAATTGTTCCTCGATCGATTGACCTTCCGACGTAGGGTTCGAGAAGTGCAGGAGGGCCTGAAGGCTGCCGCGGCTGTTGGAGGCGAACGAGGCGTACGACTTGCACAAGAAGCTATGAGCGAAGGAGACCGGTTGAGCTTCCAGGCTGTCCCAGGCGCCCAGGCTGTCCCACCTCCCAGCAGTGATGCCCAAATCAAGAGCTATGAGGCATGA
Protein Sequence
NHTDANPKAKYDLCPNCFTEGRLPANHNSNMYVKMENPTYTSTLDRDAPWTDAEILRLLEGLERFDDDWGEIAEHVGTRTREECVLQFLQLDIEEKYLDSEAPISAPTGLSLLGPQQGQLPFSQVDNPVMSVVGFLASLADPASTAAAASKSAEELKRKLRKQLDGDKADDDSQANGDNKAKSDSMDIDLRQETTMTTTTTTTTTTTTKTNALASIPLASIGARAAGFASHEEREMTRLVSAASNVTLQKLELKLKYFDEMEAVLRAERRELERARQQLFLDRLTFRRRVREVQEGLKAAAAVGGERGVRLAQEAMSEGDRLSFQAVPGAQAVPPPSSDAQIKSYEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-