Pcly041474.1
Basic Information
- Insect
- Papilio clytia
- Gene Symbol
- rca-1
- Assembly
- GCA_018247735.1
- Location
- DWGS01050364.1:17-772[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-05 0.034 15.7 0.1 30 46 11 27 8 27 0.89 2 2 7.3e-13 1.6e-09 39.2 0.2 3 43 35 75 33 76 0.95
Sequence Information
- Coding Sequence
- ATGCTTAAAGATTTGCCCTGTCAGGAAACCCTGGGAACCCGTACACCAAAGCAGTGCCGCGAGCGTTATCATCAGAACCTAAAACCAACACTCAACCACGAACCCATCACACCCGAGGAAGGTGTCATAATTGAACGACTTGTCGCGGACCTCGGGAAACGCTGGGCCGAAATTGCACGCCGTCTCAATGGCAGGAGCGATAATGCCGTCAAGAACTGGTGGAATGGTAGCCAAAATAGACGTAAACGCACGGATCGACGACGCGCTGCGCAGGATCACCACGATAGCTACTACCCCTCGAACCGCCCCGGACTATCCATTTCTACACCAGCCATTCCCATGCATGGAGCACAACTCTCACCCCTAACTGGCACCACCATGCGTCATCCCATGCATTCATGGATTGAGGCTCCTCTCCCCTCGCCATGCTCTTCCGATTCTGCTGAATCCGAAATGGGATCCAACTATACCACATCACCTTCCCATCAGACCACGCAACTCGCTGGGCCTGTCGAATTACCACCTCTGCGTCACTCAGGCTTGCCCACAGCTGGTGACAGGCTTCCCAGCTTTGACAGATTGGCTCCTCCTCCCCATGCTTATGTGGACAGGCCTGAGTATCAACCCAGGTTGCCCCATTTTGCCCCTCAAGCGCAACTACTCACCGCGCCTAACTCGCCTgtccagcagcagcagcaatcACAAAACCGAAAGGCCCAAGATTCCAGGATGCATCTCTCCGCCCTCATGGATTAA
- Protein Sequence
- MLKDLPCQETLGTRTPKQCRERYHQNLKPTLNHEPITPEEGVIIERLVADLGKRWAEIARRLNGRSDNAVKNWWNGSQNRRKRTDRRRAAQDHHDSYYPSNRPGLSISTPAIPMHGAQLSPLTGTTMRHPMHSWIEAPLPSPCSSDSAESEMGSNYTTSPSHQTTQLAGPVELPPLRHSGLPTAGDRLPSFDRLAPPPHAYVDRPEYQPRLPHFAPQAQLLTAPNSPVQQQQQSQNRKAQDSRMHLSALMD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -