Basic Information

Insect: Papilio bianor
Gene Symbol: stc
Assembly: None
Location: HiC:11347763-11363417[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.5e+04 -4.2 1.6 15 19 469 473 468 473 0.81

2 15 0.12 9.2e+02 -0.2 0.8 4 10 503 509 501 509 0.91

3 15 3.5e-05 0.27 11.1 18.1 4 19 517 532 515 532 0.93

4 15 3.2e-08 0.00025 20.8 13.9 1 19 568 586 568 586 0.98

5 15 7.5e-06 0.057 13.2 12.2 1 19 627 645 627 645 0.99

6 15 2.2e-07 0.0017 18.1 13.8 1 19 686 708 686 708 0.88

7 15 2 1.5e+04 -5.2 2.2 6 10 738 742 738 742 0.94

8 15 0.0032 24 4.8 7.4 1 11 748 758 748 759 0.95

9 15 0.056 4.3e+02 0.9 0.6 4 10 763 769 762 769 0.92

10 15 3.5e-06 0.027 14.3 14.0 3 19 777 793 775 793 0.92

11 15 2 1.5e+04 -5.3 1.8 9 12 821 824 821 826 0.60

12 15 0.00047 3.6 7.5 9.4 10 18 840 848 837 849 0.92

13 15 1.5e-08 0.00011 21.9 12.6 1 16 885 900 885 908 0.90

14 15 0.0094 73 3.3 11.0 1 18 915 937 915 938 0.83

15 15 0.27 2.1e+03 -1.3 0.4 7 12 953 958 953 958 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.5e+04	-4.2	1.6	15	19	469	473	468	473	0.81
2	15	0.12	9.2e+02	-0.2	0.8	4	10	503	509	501	509	0.91
3	15	3.5e-05	0.27	11.1	18.1	4	19	517	532	515	532	0.93
4	15	3.2e-08	0.00025	20.8	13.9	1	19	568	586	568	586	0.98
5	15	7.5e-06	0.057	13.2	12.2	1	19	627	645	627	645	0.99
6	15	2.2e-07	0.0017	18.1	13.8	1	19	686	708	686	708	0.88
7	15	2	1.5e+04	-5.2	2.2	6	10	738	742	738	742	0.94
8	15	0.0032	24	4.8	7.4	1	11	748	758	748	759	0.95
9	15	0.056	4.3e+02	0.9	0.6	4	10	763	769	762	769	0.92
10	15	3.5e-06	0.027	14.3	14.0	3	19	777	793	775	793	0.92
11	15	2	1.5e+04	-5.3	1.8	9	12	821	824	821	826	0.60
12	15	0.00047	3.6	7.5	9.4	10	18	840	848	837	849	0.92
13	15	1.5e-08	0.00011	21.9	12.6	1	16	885	900	885	908	0.90
14	15	0.0094	73	3.3	11.0	1	18	915	937	915	938	0.83
15	15	0.27	2.1e+03	-1.3	0.4	7	12	953	958	953	958	0.84

Sequence Information

Coding Sequence: ATGTCGCAGTGGAATAATTCTTACGGTTATAATAACCAATTCCAAGTGCCACCTAATTCGTGGAATAGAGATTTAAATGGGCAATATGTAAATCAACCATACTATGATAACAGACAATACGAGACAAGCAACCAATATGTTAGTTTCGATGAATTTTTAACACAAATGCAGGGTAATGGTGTTCCACAAAATAATGCTTCTAATTATAATAATGTACAATACCAGGCATACCCTACTAACCAATACAACTATCAGAATGTACCATCACAAAATCCACAGATGGAATTCAACTACGGACACCACAACCCTAACACAAGTAATAATCTGGAGACCTATCCAGTCAATGTTCAAAATCAATACAACCCATCTGTACCCGAATTAAGTTATTCAAATGAAGTTGTTATGAATTCAAAGTTGACACCAACTGCAACAGAATTTGTGCCCAAGTGTTCCGCAAATGTAGCATCTACTTCTCAAAACACTTCTCAAGAAACTACAGTTGCAAATGATGAACCAGATAACAGAAGTAGTAACACTAAATCATCAGAAAGTAATTGGAGAGAAAGGCCAAGCAATAATGAAACAGTTAATGTTGAAACAAATAATTTTAGCCGATATCAAAAAAATTATAAAAACCCAGAAGGTAATCGTAATCGTGAATCTAATAGTAGATATGAAAATAAACGTAATAATGAATCATCATCAAATCAAGAATCAAATGGGCGCTACCGTAATGGAAATAGTGGTAATAGTTATCAATCAAATCAACAAAATAAAGAATCATTGAACCAAAATAAAGATCCAGAAATTTCAGGTAATGATACCTATACTCATCAAAACGAGAATCACCGAAATATCGAAACTGGAAACCGAAATGAAACAAGAAGATACGCAAATGAAAATAATCAATCAAAATCAAATTCTAAATCAAAAAATAAAGACACGGATGCAGGTCGAACATTCTACAACAGCTCTATCAATAAAAATAGTCAAGATGTTAGGAACGGAAGAGGAGAGAGCTCTGGAAGAAATCGAAACTGGATTGGCAGTCAACGTGTCCGGACAGCTGAACGTAATAATGTTGAAGATGAACAATATGCTAATACTTATATGCATTACAAAGATGACAGAGCAGAACGAGTAGCAAATAATAAACATGAAAAAACTGCTAGCCCAGCAAAAGGTAGAAATAAACCTACTAATGACTCAGGAGGCAACACCGCAATGACCCAACGTGAGCGTCTCACTGATCAGTTAGACAAAGGAACTTTAGAATGTCTTGTGTGCTGTGAACGAGTCAAACAGACAGATTCTGTTTGGTGGTGCTCAAATTGTTACCATGTTTTACATCTAAGGTGTATAAGAAAATGGGCCATGAGCAGCTTAGTGGAAGGCAAATGGAGATGCCCGGCATGTCAAAACACGAATGAAGATATACCAACGGAGTATCGTTGCATGTGTGGTGCTGTTAAATCGCCAGAGTACTCCCGTGGCTCGGTCAGTGCTCACACTTGTGGCAAGTCATGCCGTCGACCGAGGAACTGTCCACATCCCTGCACATTGCTCTGCCATCCTGGCCCCTGTCCGCCATGCCAGGCCACTGTCAGCAAACAATGTGGTTGTGGTGCGGAGACTCGTTCAGTGCTATGCAGCAGTAAGCTGTCGCAGCTGTGTGGTCGTGAGTGCCGCCGCAAGCTGGCCTGCGGCGTACACGAGTGCCAACGTGAATGCCACGAAGGACCTTGCGATGAATGCTCCGAAATTGTTACACAAGTGTGCTACTGCCCCGCGGCCAAAACGCGGTCTGTGCCGTGCACGTCGGACACGAGCGAGTGTGGCGCGTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGGCGTGTGTGCCACGCCCCGCCCTGTGCGCCCTGCCCCCTGCGCCCCGACAACGTGCGCTCCTGCCCCTGCGGGAATACTAAGATAGAAAAGGACCAACGAAAATCTTGCACTGATCCGATTCCTTTATGCGGTAACATCTGTGCCAAGCCATTGTCCTGTGGCCCAGAGGGTGATAAACACTTCTGTAAACAATTGTGTCATGAAGGTCCGTGTCCGACGTGTCCCGACAAGACTCTATTACCGTGCCGTTGTGGACACTCAAGCCACGAAGTGCCTTGCTCAGACTTGCCTGAAATGCTCAACAATGTCTTCTGCCAGAAGAAATGCAGTAAGAAGTTGTCATGTGGGCGTCACCGTTGCCGCACGGTGTGCTGCGCTGCGCAGTCGCACCGGTGCGCAGTGGTGTGCGCGCGCACGCTCTCCTGTCAGCTGCACCGCTGCGAGGAGTTCTGTCACACAGGACATTGTGCACCATGCCCCCGTGTCAGTTTTGAAGAGCTCCATTGTGAGTGTGGTATGGAAGTAATGTTGCCACCGATCCGATGTGGCACACGTCCGCCGGTGTGTCATGCCCCGTGCCGGCGCGAACGGGCATGCCACCACCCGCCGCACCACTCATGCCACACTGGTGATTGCCCACCCTGCGTCGTGCTCACCACCAAGATGTGCCATGGACAGCATGAGGAGCGGAAGACGATCCCGTGCAGCCAGGAGGAGTTCTCGTGCGGTCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAGCACACCTGCACCAAGACCTGCCACAAGGGACCCTGCGATTCTGACAAATGTAAGCAGGCGTGTACGGAGAAGCGTCCGAGCTGCGGCCACCCGTGCGCGGCGCCCTGCCACGTGGACAACGGCGGCATGTGCCCCAGCAGCGCGCCCTGCCGCCGCCTCGTGCGCGCCACGTGCGCCTGCGCACGCCGCTCCGCTGAAAGACCCTGCCATGAGAACGCCAGGGACTACACCAAAATAATGAGTGCGTTGGCCGCAACAAAAATGCAAGAAGGAGGCTCCGTGGATCTGTCTGAAGTGCATCGCCCTGGAGCTATGTTGAAAACTTTGGAGTGCGACGACGAGTGCCGCATGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAACACGTGCGCGCCACCGCCTCTAAGCAGAAGACGCGCGCGCATTCGTTCCCATCGATGAACCGTCAGAAGCGTCAGTTCATTCACGAGCTGTGTGAGCACTTTGGTTGCGAGAGTGTCGCCTACGACGCGGAGCCCAACCGCAATGTTGTCGCCACCGCAGACAAGGAAAAGTCGTGGTTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGGGCGCCCGCAGCCCCCGCGCCCGCACTCGCGCAGCCCGCCACCACCACCTCCACCAGCAGGAGTAGTGGAGGTTGGGCGACACTGACGTCGACCAATGCGTGGGCTGCTCGCAGTCAGCCGGCGCGCGTCGAGCCTAAGATTGACTACTTTGACAATCCGCCTGAAAACTAG
Protein Sequence: MSQWNNSYGYNNQFQVPPNSWNRDLNGQYVNQPYYDNRQYETSNQYVSFDEFLTQMQGNGVPQNNASNYNNVQYQAYPTNQYNYQNVPSQNPQMEFNYGHHNPNTSNNLETYPVNVQNQYNPSVPELSYSNEVVMNSKLTPTATEFVPKCSANVASTSQNTSQETTVANDEPDNRSSNTKSSESNWRERPSNNETVNVETNNFSRYQKNYKNPEGNRNRESNSRYENKRNNESSSNQESNGRYRNGNSGNSYQSNQQNKESLNQNKDPEISGNDTYTHQNENHRNIETGNRNETRRYANENNQSKSNSKSKNKDTDAGRTFYNSSINKNSQDVRNGRGESSGRNRNWIGSQRVRTAERNNVEDEQYANTYMHYKDDRAERVANNKHEKTASPAKGRNKPTNDSGGNTAMTQRERLTDQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEDIPTEYRCMCGAVKSPEYSRGSVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLSQLCGRECRRKLACGVHECQRECHEGPCDECSEIVTQVCYCPAAKTRSVPCTSDTSECGAWSCGAECARVLSCGAHVCRRVCHAPPCAPCPLRPDNVRSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLSCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSHEVPCSDLPEMLNNVFCQKKCSKKLSCGRHRCRTVCCAAQSHRCAVVCARTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGMEVMLPPIRCGTRPPVCHAPCRRERACHHPPHHSCHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDSDKCKQACTEKRPSCGHPCAAPCHVDNGGMCPSSAPCRRLVRATCACARRSAERPCHENARDYTKIMSALAATKMQEGGSVDLSEVHRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRATASKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPAPALAQPATTTSTSRSSGGWATLTSTNAWAARSQPARVEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: iTF_01144986;
80% Identity: -