Basic Information

Insect: Papilio bianor
Gene Symbol: iec1
Assembly: None
Location: HiC:698582-706465[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.2e-05 0.0021 18.2 3.3 1 23 211 234 211 234 0.95

2 9 5.7 3.8e+02 1.7 8.3 1 23 241 263 241 263 0.98

3 9 0.00026 0.017 15.3 4.6 2 23 295 316 294 316 0.97

4 9 1.1e-05 0.00076 19.6 0.1 1 23 320 343 320 343 0.97

5 9 1 68 4.0 0.6 3 20 360 377 358 379 0.91

6 9 0.34 23 5.5 5.3 2 23 443 465 442 465 0.88

7 9 2.6 1.7e+02 2.7 0.1 1 23 477 498 477 498 0.78

8 9 5e-05 0.0033 17.6 1.1 1 23 504 526 504 526 0.96

9 9 3.1e-05 0.002 18.3 1.2 1 23 532 557 532 557 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.2e-05	0.0021	18.2	3.3	1	23	211	234	211	234	0.95
2	9	5.7	3.8e+02	1.7	8.3	1	23	241	263	241	263	0.98
3	9	0.00026	0.017	15.3	4.6	2	23	295	316	294	316	0.97
4	9	1.1e-05	0.00076	19.6	0.1	1	23	320	343	320	343	0.97
5	9	1	68	4.0	0.6	3	20	360	377	358	379	0.91
6	9	0.34	23	5.5	5.3	2	23	443	465	442	465	0.88
7	9	2.6	1.7e+02	2.7	0.1	1	23	477	498	477	498	0.78
8	9	5e-05	0.0033	17.6	1.1	1	23	504	526	504	526	0.96
9	9	3.1e-05	0.002	18.3	1.2	1	23	532	557	532	557	0.96

Sequence Information

Coding Sequence: ATGGCTGATTTAAAGATATGTCGAATTTGCCTGCGAAGCGGAGCTAAAGTTTATAAATATGATCAATATCAACTGAAATCTTATTACGAGGAAGTTTTGGCTTTAAAGGTGTATGACAATGATTGTCTTCCTCGTTACTTCTGCTACGAGTGCTCCGTAATCCTGCATAAATTTCACAAGTTCAAGGAGAAATGCTACAGAGGTCAGAAAACACTAAAGGACTTACTTTGGAAGGGTCCTATAACATATGAATCAGTATATAAGGTAGATAAAACAAACCTTGAATCCAATTTAGCTGTAATACGCACGACTGATAGAGTTAAGACTTACACTATAGATAATTCAATAGATGATGATATCTTTGATGAGAGACAGGATAGTATGGATTATGATGTATTCATAGAAACCGATTCAAACGAACCAAACAGACCAGCAACAGTATTCATAGATGTTAAGAGAGAATGTATTAATTTAAACAATGAGTTTATAAAAGAAAATGACGGAAGTATAACTGAAAAGCCAAATAGAAAATTGGATCCAGAATGTTGGAAAGTGAACATCTTGTCAGAGGAAGAGGCTGTAAGAGAATTCAGATTGAGAGCTGAAGATTCAAAATATTTAGCGGCAGCATTCAAATGTCAGGATTGCTTCAAAGGATTCTCTAAACAAGATATGTTGAAACGGCATAAGCAATTAAGACATAGTGAAGAGTTGGGTATATTCGAGTGCAAATTTTGCCGCATGCGGTTCAAGTGGGAATGTCACCGACGTAGACACATCCGTCAGCACTACACCAAGTATGAGTGTCTTAGGTGTCACCTTGTCTGCCCGTTAGAAAGCACAGCAATACTCCATGAAGAATATCATAGCGGTATCAAAAAAGAGTGTGTTCACTGCGGACAACAGTTTAGGCACGCGTCGACGTACTACACGCACTTGCGCACGCACCGCAGCGAGTTCGTGTGCGCGGTGTGCGGCGCCTCCTTCGTGAGCCAGGCCGGCCTGCGCCAGCATCAGCGGCTCAAGCACACCGCACAGGAGAGTCCAGATGACGAGGAGGAGGAGGCGAACACGTTCTGCGCGCGCTGCGACATGCGGTTCGAGTCGCGGAAGGCCTACGAGGGACATCTGTTCCACTCCGCCATGCACGCCAATGACGCTGAAGAAGGGAATGAAAGTCATGATAGCGCTCAAAAGAAGGTATTGGGAAAGAAAATGCAAGCCAAGATCAGTAAAGGATTGAAACGCAGTAAGAGCGAGGAGTTCGCCATTCTGGCGGAGGGCAAGCGCCGCAGGAAGCTCAAGAGGAAGCGCAGGAAACCCACCACCTGCCACCAGTGCGGGTTGCAGTTCGAGTCCCAGTCGGCGTGTCTGCGGCACCACCAGGCGCAGCATCCGCGCACCTCCTTCTTCCCGCCGCACCTCAGGCACATCTGCGAGATCTGCGGCGCCTCGCTTGCGCCGGGCAGCGTGTCGACGCACCAGAACCTGCACAGCCGCGCGCGCGTGCACGCCTGCGACTCCTGCGGCAAGGACTTCTACTCCCGCGTCGCGCTCAAGCGGCACCAAGTGACGCACACGGGGGAGAAGCCGTTCGCCTGTCCTCAGCCTCAGTGCGACAAGCGCTTCACGCAGAGCAACAGCATGAAGCTGCATTACCGCACCTACCACCTCAAGCATCCCTACCCCAAACGATCGAGACCGAAGAAAAAGATAGAAATAATAGACAATATAGAGATAGAAGATAGTTCAGAGGAGTCGGACGATAGTCTGCCGGAACCCGAGATGGAGAACCCGCTGGTGGAAGTGAGCCTGGAGCCCAACCTGAGGCAGGTGAGGGCCGAGGAGTTGGGGCAGGACGCGGCGCTCGTCAGCGCCGGCCTGGAGCTGGTGCAGGCGCCGTCGCCCGACAGGCACGCCGCTGACGATACCATACATTATTTAACTTTGTCTTATATATGA
Protein Sequence: MADLKICRICLRSGAKVYKYDQYQLKSYYEEVLALKVYDNDCLPRYFCYECSVILHKFHKFKEKCYRGQKTLKDLLWKGPITYESVYKVDKTNLESNLAVIRTTDRVKTYTIDNSIDDDIFDERQDSMDYDVFIETDSNEPNRPATVFIDVKRECINLNNEFIKENDGSITEKPNRKLDPECWKVNILSEEEAVREFRLRAEDSKYLAAAFKCQDCFKGFSKQDMLKRHKQLRHSEELGIFECKFCRMRFKWECHRRRHIRQHYTKYECLRCHLVCPLESTAILHEEYHSGIKKECVHCGQQFRHASTYYTHLRTHRSEFVCAVCGASFVSQAGLRQHQRLKHTAQESPDDEEEEANTFCARCDMRFESRKAYEGHLFHSAMHANDAEEGNESHDSAQKKVLGKKMQAKISKGLKRSKSEEFAILAEGKRRRKLKRKRRKPTTCHQCGLQFESQSACLRHHQAQHPRTSFFPPHLRHICEICGASLAPGSVSTHQNLHSRARVHACDSCGKDFYSRVALKRHQVTHTGEKPFACPQPQCDKRFTQSNSMKLHYRTYHLKHPYPKRSRPKKKIEIIDNIEIEDSSEESDDSLPEPEMENPLVEVSLEPNLRQVRAEELGQDAALVSAGLELVQAPSPDRHAADDTIHYLTLSYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01148435;
90% Identity: iTF_01149939;
80% Identity: -