Pbia007099.1
Basic Information
- Insect
- Papilio bianor
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:10793748-10794265[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-09 3.6e-06 26.4 0.1 3 37 2 36 1 39 0.95 2 2 0.81 8.3e+02 -0.4 0.0 9 20 36 47 36 47 0.84
Sequence Information
- Coding Sequence
- ATGGATAACATGAGACAGGCAATTCATGCAGTCTTAAGCAAAACTGCTGGCTATAGAAAAGCAGCTCACCTGTATAGTGTACCACAGACCATATTAGAGCGTCACGTCGCTAAAATAAGGAAAGGCGAGCTGTCTCTTAACTATACTCCAGAAGAACAAGAACAACTTAAGAGAACGAAGAAGTGTTCTAATCCAAATGACCCAAAGTTAAAGAACTCCAAGAAACAGAAGACCCAAGAAGCTCCTTCTGGTGTGGAAAATTCCGACGAGGATACCATGTGCCTGTATTGCCTTGACGTGAACCATACTTATAAAGTCTTCGGAAGGTTGGGTGGCTTGCCAACTATATGGGCGGTGGGCTCATACAGCTTTTGCTGGTGTAGACGACGAGAATACAGAAGAAATCCACAACTGCTTGTACTGTGA
- Protein Sequence
- MDNMRQAIHAVLSKTAGYRKAAHLYSVPQTILERHVAKIRKGELSLNYTPEEQEQLKRTKKCSNPNDPKLKNSKKQKTQEAPSGVENSDEDTMCLYCLDVNHTYKVFGRLGGLPTIWAVGSYSFCWCRRREYRRNPQLLVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01138887;
- 90% Identity
- iTF_01138888;
- 80% Identity
- -