Pbia010786.1
Basic Information
- Insect
- Papilio bianor
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:10634299-10634828[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 1.5e-07 30.8 0.2 3 37 2 36 1 39 0.95 2 2 0.84 8.6e+02 -0.4 0.0 9 20 36 47 36 47 0.84
Sequence Information
- Coding Sequence
- ATGGATAACATGAAACAGGCAATTTATGCAGTCTTAAGCAAAACTGCTGGCTATAGAAAAGCAGCTCACCTGTATAGTGTACCACAGACCACATTAGAGCGTCACGTCGCTAAAATAAGGAAAGGCGAGCTGTCTCTTAACTATACTCCAGAAGAACAAGAACAACTTAAGAGAACGAAGAAGTGTTCTAATCCAAATGACCCAAAGTTAAAGAACTCCAAGAAACAGAAGACCCAAGAAGCTCCCTCTGGTGTGGAAAATTCCGATGAGGATACCATGTGCCTGCATTGCCTTGACGTAAACCATACTTATTTAAAGTCTTCGGAAGGTTGGGTGGCTTGCCAATTATATGGGCGGTGGGCTCATACTGCTTGTGCTGGTGTAGACGACGAGAATACAGAAGAAATCCACAACTGCTTGTACTGTGACCCAAAATAG
- Protein Sequence
- MDNMKQAIYAVLSKTAGYRKAAHLYSVPQTTLERHVAKIRKGELSLNYTPEEQEQLKRTKKCSNPNDPKLKNSKKQKTQEAPSGVENSDEDTMCLHCLDVNHTYLKSSEGWVACQLYGRWAHTACAGVDDENTEEIHNCLYCDPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01138889;
- 90% Identity
- iTF_01138889;
- 80% Identity
- -