Basic Information

Insect: Panzeria rudis
Gene Symbol: grau
Assembly: GCA_956483635.1
Location: OY101450.1:107405300-107407144[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.14 15 7.7 0.2 3 23 253 274 252 274 0.95

2 9 1.9e-06 0.00022 23.0 3.1 1 23 307 329 307 330 0.96

3 9 0.00024 0.027 16.4 1.7 3 23 340 360 338 360 0.95

4 9 4.1 4.6e+02 3.1 0.4 1 23 368 393 368 393 0.90

5 9 0.03 3.4 9.8 0.6 3 23 400 420 399 420 0.97

6 9 0.091 10 8.3 0.3 2 23 429 453 428 453 0.83

7 9 0.018 2 10.5 7.2 1 23 458 481 458 481 0.97

8 9 2.7e-05 0.0031 19.4 0.4 1 23 486 508 486 508 0.97

9 9 0.00043 0.048 15.6 2.7 1 23 514 537 514 537 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.14	15	7.7	0.2	3	23	253	274	252	274	0.95
2	9	1.9e-06	0.00022	23.0	3.1	1	23	307	329	307	330	0.96
3	9	0.00024	0.027	16.4	1.7	3	23	340	360	338	360	0.95
4	9	4.1	4.6e+02	3.1	0.4	1	23	368	393	368	393	0.90
5	9	0.03	3.4	9.8	0.6	3	23	400	420	399	420	0.97
6	9	0.091	10	8.3	0.3	2	23	429	453	428	453	0.83
7	9	0.018	2	10.5	7.2	1	23	458	481	458	481	0.97
8	9	2.7e-05	0.0031	19.4	0.4	1	23	486	508	486	508	0.97
9	9	0.00043	0.048	15.6	2.7	1	23	514	537	514	537	0.97

Sequence Information

Coding Sequence: atgacttgttttgtgtGCACAAAAAACTCTAATGAAACTTTATCAATATTTGGAGAAGACCATGTAAATTCTAAAATAGCTTCAATGATTGAGAAACATTTATGTCTCAAGCCTCATATCAAGGAGGAACATAAAACCTTGGAGATATGTGTTAAATGTTGGGAAAAGCTTAGAGAATTCAAcgaattttttgaatttgttgcACAAGTTCACAatgaacaaacaaaatttttgaaagaaatagTTTCAGAAGAAACGGATGACTTGCAAGAGGAAAGAAACATCTGGTGTAATAGTATAAAGACAGAAACATTGGATGACAATGTTGAATTACATTTTGTTGAAACGGACGGAGGTTTTACCGAAAATCCTCTTCTAGACCTAGAACCGGAGGAAGGTAGTGACATGGAAGATTTATTGAATATAGATGTACCAGCCACGATTGAAAAATCTAAAgttaccaaaacgaaaagatCTAAAGAAATCACAAAACGAGCTAAAAGTTCGAAATCAAGCGATAGTGATGATGAAAACGAACAATCATTGGCTTCACTTCTAGATGATATTAAGAATGAAGACAGTGATGAAACTTACGCTACAAagaatgaaaagaaaaagaagcaAAAGAGAAAAGTATCTCGAACCGAAGTCAACCGTTCAAAAAAAGTGGACAGACCGAATGATCTAAAACGTCGAAAGGGTCGTGTTTTATTAGAAGAGAATGAAAGCCTTATTAAAAAGCATATTAAAATGTTATGTCAAATGTGTTCCTATATAGGCGAAGACTTTTCAAATTTGATAAAACATTACAAAGAAGAGCATGTTGGTGTTAAGCCTTTTATAAAATGTTGTGAGCGTAAATTGGATTGTCCATCGGATATTTTGCAGCATGCTCATTTCCATGAAGATCCTGAACATTTCAAGTGTCAAGAATGTggtaaaacatttattaataattcCGGGCTAAAGGACCATTTCATGAAACATCACGAACCGGAGGAAAATCTCCCCTATGGCTGTGATGAATGCCCGCGGcgattttctagaaaaaatctACTTGCTCATCATAAAGCTAAACACATACCGAAAACGGAGAGATCACACTTTTGTCAAATATGTTCGCCGCCAAAAGCGTTTGCAAGTGATTATATATTACAAATTCATATAAAGTCACGCCATACGAAAGCATCCAATATTTGTCATGTATGCGCTAAAGAGATACGAGATAAGCAAGCGTATGAAAAACATGTACGGCTACATTTCGAGAAAAGCGGACCACGCCTTAAATGCCCTCGAGAAGGGTGTGAAAGTTGGCTTAAAGACCAGGATAATTTAAAACAGCATTTAAGACGCTTCCATAACCAAGCAAGATATGAATGCCCTGAATGCAACCgcatatgtaaaaataaacattctTTAACCTGCCATTTAAGAAACACACATTCCACGCAAATCTTTACATGTGAAGAATgtcaaaagaattttaaaagtgCTTTGTCGTTAAAGgaaCATATGGCTGGGCACACGGGAGAACCTCTTTACAATTGCCCGTTTTGTACTAGAACTTTTAATTCTAAGGCAAATATGTATTCGCATAAGAAGAAAATTCATCCCATAGAATGGGATTTGGTTAACAAGTCAAAAAtgggttttatttaa
Protein Sequence: MTCFVCTKNSNETLSIFGEDHVNSKIASMIEKHLCLKPHIKEEHKTLEICVKCWEKLREFNEFFEFVAQVHNEQTKFLKEIVSEETDDLQEERNIWCNSIKTETLDDNVELHFVETDGGFTENPLLDLEPEEGSDMEDLLNIDVPATIEKSKVTKTKRSKEITKRAKSSKSSDSDDENEQSLASLLDDIKNEDSDETYATKNEKKKKQKRKVSRTEVNRSKKVDRPNDLKRRKGRVLLEENESLIKKHIKMLCQMCSYIGEDFSNLIKHYKEEHVGVKPFIKCCERKLDCPSDILQHAHFHEDPEHFKCQECGKTFINNSGLKDHFMKHHEPEENLPYGCDECPRRFSRKNLLAHHKAKHIPKTERSHFCQICSPPKAFASDYILQIHIKSRHTKASNICHVCAKEIRDKQAYEKHVRLHFEKSGPRLKCPREGCESWLKDQDNLKQHLRRFHNQARYECPECNRICKNKHSLTCHLRNTHSTQIFTCEECQKNFKSALSLKEHMAGHTGEPLYNCPFCTRTFNSKANMYSHKKKIHPIEWDLVNKSKMGFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00900043;
90% Identity: -
80% Identity: -