Prud013921.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- hang
- Assembly
- GCA_956483635.1
- Location
- OY101448.1:66254216-66275125[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.22 25 7.1 0.9 3 23 406 427 405 427 0.92 2 18 0.44 50 6.1 3.4 3 22 530 549 528 549 0.90 3 18 0.024 2.7 10.1 1.7 1 22 624 645 624 647 0.90 4 18 0.0021 0.24 13.4 0.2 3 23 766 787 765 787 0.96 5 18 6.1e-05 0.0069 18.2 0.2 1 23 795 818 795 818 0.96 6 18 0.00023 0.026 16.4 0.1 2 23 907 928 907 928 0.97 7 18 0.0018 0.2 13.6 2.7 2 23 975 997 974 997 0.95 8 18 0.0072 0.81 11.7 0.2 2 23 1006 1028 1005 1028 0.95 9 18 0.0049 0.55 12.2 0.1 1 23 1041 1064 1041 1064 0.95 10 18 0.00022 0.025 16.5 1.1 1 23 1123 1145 1123 1145 0.99 11 18 0.061 6.9 8.8 1.1 1 23 1153 1176 1153 1176 0.96 12 18 0.055 6.2 8.9 0.1 2 20 1184 1202 1183 1202 0.95 13 18 8.9e-05 0.01 17.7 0.1 3 23 1268 1288 1267 1288 0.98 14 18 0.00054 0.062 15.2 0.3 1 23 1323 1345 1323 1345 0.97 15 18 0.00028 0.031 16.2 1.4 2 23 1434 1456 1433 1456 0.91 16 18 5.1 5.8e+02 2.7 0.1 3 19 1477 1493 1476 1495 0.92 17 18 0.18 21 7.3 0.9 3 23 1511 1531 1511 1531 0.97 18 18 0.00079 0.089 14.7 0.9 1 23 1809 1831 1809 1831 0.98
Sequence Information
- Coding Sequence
- ATGGAGAAACTGAAGCCCCTAGAGAATGATGGTCTCGGGGAGATTTCCAGCAATGACAACTTATCATTACGAATCTGTCACGCCTGCATAAGCTACTTAAACTCTTGGCAATCTTTTAAGAATCGTTGTCTAGCAGCACAGTCTAAACAACGTTCTTGGCTggaaacttcaagcaaaccaaTACAATCTGCCGAACAACATCATCAAACAGCAGATAATCATTATGATGATCAGCAACACCACCATCGCCAGcagcatcatcaacaacaagATGAACAGTCATTGGCTTCCTCCATATTGGAGGgaatttcaacattaaaaaaacgcaaatCTTTAACAGTCTATGTGAGTCCAAAATCGCAacaaactaaacaacaacaagaaaaattattacaaaaacagcAACTAAACGTCGTTATGCCGTTAACAAAACGTCACTATACCAAACATAAATATAACAAGTCACAGAAACAATCGCTAAGTCAAACGTCAAATACAGTGTCACAAACTACAACAACAACGCATCATGTACAAGCGTTGTCgagaaaaaccaaacaaaaatcgGATAAGAAACAAACCTCAACAAGCCAGCAGCCACTATTAGCTACTTTTTCTTCCTTACAACAGTCATTTATTACGCCGGCAGTTCCTAGCGTAACTGCTACAGTAACTTCTTGCACGATTACTGCGCCAACTGTGACAGCTATTGCAACTGCAAGAACTACCGCAACGGCAACAACTTGCTTAAGTACTGTGACCAGCACAACACTCACTACTACGGCAATTGCGGCTAGTAGCAGCAGTATTGCCGAAAACATAACCGCTGCTGTTGCCGCTGGTTCGATTGTTAGTGCTGGTTCTAGTGACGAATGTTTGGTCGCAGGGTCAAATACATCCTCATCGAGCATCGCTTGTACAAGTGCTGTGCAACAATTGCGCTTGTTTAGACGATACTCTTATAATccgTTACCTGCAGTACAAATAAAAGACGAACCAGTTGAGGTAGATGATGACTACAGTGCAGTCAAACATCAACAACATGATGAATCAGATGAAATGGTTGTAGATCCTACTATGTTCTTAGAACGAACTGCCGATGAGGGTgaatttatgGAATCTACTTCCAACTATGACTATGAAGTAATAAGACCACCTGCTGATTTAAAGCCATTACCAGCTAGTACAACCATACGTATGAGCACTAAAGAGGCTGCTTGCCGTGCTtgcaatttgaaattttcaacgCGTGCCAATGCAAGACGCCATGAAAAGAACTTACATCCCAATCTATTTGAGACTTTAGAGGAAAATGATCAGTCAATTAATAAACAAACCGCTGCATTAAATGCCTCCTTAGAACTACAGAGAGCTGTAGCAGCTGCCGTTGCAGCCGATGCTTGTAAATTATCTACTGGCGCCGTTATAACGCCGCAAAAATACCGACAAGAAGTTGTCAATGCTTTTAATAATAGCGAATTTGGCTTTGATTATGAGAATCCGGAAAAATACCGCGAACTGTTGACAGAtgagaaaataattttcctGCAACAAAACGATGAATTCCTAAGACAATATCAAAATATGACTTGTCGCTGTTGTAACAAATACTATTCAACCTATAAGAATTTCATGGCTCATATGCGTAAGAAGTACCTAACTCTACCCAGAAATTGTTGTTTCAATTGCTTAAAACTCAACGACTCTAAAGCATTGTTTATATCTCATTTAAAAAAGCGCAATtgtataaatttacataaagtgCTGCATAATCTTATGGCAAGAAATGCCAACTTTGCAGCTGCTGTTACAGCAACTGTGGCTGCGGCTCCGGAAAAAGTACGTGCCAAAGAATTGTTGGTTAATAAAATGTACGAGTGTAAACTATGTACAAAAACGTTCCGCCTAAAATTAGAATTTCGCTCACATGTCTATGACGAACATGCCGATGTGCAACGCAAAGATGTTAACAATACCCAGTGTTGCTATTGTACTGTCGATATTGAAGATCCAGCTGATCGTAAACGTCATTATAACAACATGGATTGTATTGTAACATTGAGATGTGTTACCTGCGATACAAAACATGAAACCCAACAAAAGTTTATGGAACATGTGCAGGAAAAGCATTTAGCTAATTTTGGTGAACAGTCGAAATTCCTGTTAGGTGGTGATAACTCTCCGGGAAAAATGACAGGAGGTGCATCTTCGGCTGACGATTCACGCAGTGGTAATGTAAATGTATCGCTTATTAATACCACGCCCAAAACGCAATACTTTTCACGTATGCCACAAGCGTGCCCGATTTGTGGGCAACAATACAATAACTACAATAATGTTTTGCGACACATGGAATCAAAACACCCTGACCAGTTGCCACAAACCTATAAATGTGTTAAATGTGGACAAGGTTATCCTAGGTTATCAAATTTGCGAGAGCATATGGTTAGTTCTCATGGAGCTGATAAAGCACGTCATACAGGCTTTGAGTATATCGTTAATGCAGATGCGGTTAAAACTGCAACTGGCACAACAGCTGCCACGCAAAATCCCTATACAGGACGTTACGATTATGTGATGAAGGATTTAATGTCTATAACAAATGGTGGGACAGTTGCGGAAGAAGATTGTGATAGTGAAAATGTAGCTAAGAAAATGCGCTTGGATGCTAACATTTCGGTGAATAACAACAATATCTCTCTCACTCATGTAAGCCAAAGGGAATGTTCTATTTGTAATGCTGTGTTTGCCAATAATATTGGCCTGTCCAATCACATGCGTTCACATCAAAGTGCTCAAAACAGCAATTATAGTGTATCAACTTCAAAGGCAGCGACAAGTGCTAACCAGCAGCCCTTAACTGGTCAACAGCAGATATTAAGAAAGTCTTTAGAACAAGCTGCTGACAGACGTTTCCGTCGCATGCGTTGCCGCATTTGTCAACGTCGCTTCTCCTCGAAAAAATCCTATCGTTATCACATGCTCAATGACCATCAAATACGTAATGTGCAATTTATAAAGTGTAAATTATGTGATGCTGAATTTGCTTATGAAAAGGGCTTGAAAGTGCACATGTTTAAAATACACAATACACTGCTCAAAGATGATATGATTATAAAACAATATGAATGTGAAATTTGTTCCATAGTCTATCGGACAGATGTAGAGTTACAACATCATTTAGCCAATGTACATGACAAGCAAGGAGAACCATCCAACGTAGATGATGAAGATGATGTTTATAATGCCGATGAGCCTGTTGCCGCTGTAAATAGGGATAACAGCACATTAAGTGCTGATATGTCGGGCGTATCAACACCAGTTAGTGGATTAGGATCGGGAGAGGCCCCAGCAGGACCCTTATATTGGTATCAATGTAAATATTGCCCCTCCAactttaatacaaacaaaaaattggccATACATATTAATTCGCACGATGAGTTCGACTCCAATGATTATTCTTGCAAAGATTGTGGCAATCTTTATAGTGGACGTAAAAGCTTATGGGTTCATCGATATAAAAAACATCCTCAAATACCCGAACCCTCCGAATGTGTTATGTGCAAGAAAGTATTCTTCGATAACCCAATGTTGGAAAATCATATACCTTCGTGTAATCGTAAACCTATTACGCAAGCGGTCAATGAAACTGCTACCGCTgtatacaaacacaaaacaggTGATGATGAGGACGAAGATGATGACGAACACTCCCGCGATGCGGAAAACACTCTATCCACCACCATTAATGCTACTGTAGGCAGTgcaagtaatttaaaaataaaattgcctgAAGTTGCTTGTACGATTTGCGGAGCACGTTTCACTGACCAGGAGCTGTTCGCCAAACATATACAAATGCATGAAATGGAACTGTATACGGACAATCCCTTGGCGGCCATGTTTGATACTGGTCCCGCTGATCCAAATCAGTTCTATATGGATCGTATAAATGATAATGGCGAGTATGCATGCGATGTGTGTGCAAAGACATTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACATACGTCGAGCAACTCTCATACACAACACtcacagcaacaacaacaacagcaacaaataaTCAAATCACAGCAACAGCAACCACAACCACAACATCATCAGCAGCCGAAATCCAAGATGCCGATCAGCCATCAACATCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGTCAATTTGCCAATTTGGGTGGCAACCACAGAACCCAGAAACGTAAACGTGAACTAAAATGTCCGCACTGTCCCTCCACTTTTATTAGTAACAACAATTTGAGACGTCACTTGTTCGAATTGCACAAAAATGAAATCGGCTATTTACCTGAACCGCCGAAAATCGAATGTGATCTACCAAACATGTGCAGAAGGTGTAATGTTAAGTTTGAAACAAAAGGCGAATGGATTGAGCACAAAGTTGCCGAAGCCAGGGTTATGAGACCGTTCGGTCCATTCCAATGGGGCTGTGATTTGTGCGGTGCGTACGTATCCcgtaaagaaaaattaataaatcatTTGCATAATCATATGAAAGATCAAGTAATAGTGCCGGTCGAACGATTAGAATCCATTAAAGAGCAGCAACAGCAGCCTAAGCAAGTACAAAATCAAGAACAATTGCAAAAACAATCGACGGCTCAATCTCAtagccaacaacaacaacaacaacaaccagaaCGGCAAAGCGAAGATGTGGACATTATGCCTAAATTCAAAAAGATCAAAATACCCTCGTTGCCACAGAAACAGGAAGTAGATGAAGAATCAAGAGAGAGTACGAAAGATCAAtattatgatgatgatgacgatgatgatgacgatgaggAGGACGATGGTGAGGGTGATGTTGAAGCTGAAGTtgataataatgaaaataaagttgGAGTAAAGGAACAGGCTCagaagcagcagcagcaacaacaacaacaacagcagcagcagctacAACGACCTGTAGAAGAATATGATGAAGATGACGAAGACGAAGCAGTTGAAGGAGCAGTGTTCGATGATTTGGCAGTAGGAGCTCAACAGACGGTGGGCGGTGATGAAGATGTCGAAGAGGAGGATGATGACGCCGATGGCGATGAGGAAGAAGACGACGAAGATGACAGTAGTGATGCAGATGATGAAGAACATTCTACCAACGAAGACACTAATGAGGCCtacattcttaaaaacaaaccTACATCAATTGCTCAGACCCCTCGTTACAATGACACTGAAAACGATGATGTggaagatgatgatgatgatgatgattccGATGAGTTCGATGATGATGAAGATGATAATTCCTCTACAGAAAATCGCAAAACACCATCTTCGGCAATCAGTAATGTTGGTGTAAAATCCCGCTATTCCTGTGATTTATGCCAGTTGTACTTCGATTCGCAGCAAGAGCTGCAAAAACACGTTAAAATGCATTTTCTTAATGGTCCCGGCTCCGTAACATTAACGGAAATTAAATCTTCAAAAAGCCGCAGCAGCAGTAGCGACGTTGTAGCCATATAG
- Protein Sequence
- MEKLKPLENDGLGEISSNDNLSLRICHACISYLNSWQSFKNRCLAAQSKQRSWLETSSKPIQSAEQHHQTADNHYDDQQHHHRQQHHQQQDEQSLASSILEGISTLKKRKSLTVYVSPKSQQTKQQQEKLLQKQQLNVVMPLTKRHYTKHKYNKSQKQSLSQTSNTVSQTTTTTHHVQALSRKTKQKSDKKQTSTSQQPLLATFSSLQQSFITPAVPSVTATVTSCTITAPTVTAIATARTTATATTCLSTVTSTTLTTTAIAASSSSIAENITAAVAAGSIVSAGSSDECLVAGSNTSSSSIACTSAVQQLRLFRRYSYNPLPAVQIKDEPVEVDDDYSAVKHQQHDESDEMVVDPTMFLERTADEGEFMESTSNYDYEVIRPPADLKPLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSINKQTAALNASLELQRAVAAAVAADACKLSTGAVITPQKYRQEVVNAFNNSEFGFDYENPEKYRELLTDEKIIFLQQNDEFLRQYQNMTCRCCNKYYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHNLMARNANFAAAVTATVAAAPEKVRAKELLVNKMYECKLCTKTFRLKLEFRSHVYDEHADVQRKDVNNTQCCYCTVDIEDPADRKRHYNNMDCIVTLRCVTCDTKHETQQKFMEHVQEKHLANFGEQSKFLLGGDNSPGKMTGGASSADDSRSGNVNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSSHGADKARHTGFEYIVNADAVKTATGTTAATQNPYTGRYDYVMKDLMSITNGGTVAEEDCDSENVAKKMRLDANISVNNNNISLTHVSQRECSICNAVFANNIGLSNHMRSHQSAQNSNYSVSTSKAATSANQQPLTGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHDKQGEPSNVDDEDDVYNADEPVAAVNRDNSTLSADMSGVSTPVSGLGSGEAPAGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNLYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDNPMLENHIPSCNRKPITQAVNETATAVYKHKTGDDEDEDDDEHSRDAENTLSTTINATVGSASNLKIKLPEVACTICGARFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRINDNGEYACDVCAKTFTQMTALKVHRKWHFRGDSKQNEADQHTSSNSHTQHSQQQQQQQQIIKSQQQQPQPQHHQQPKSKMPISHQHLLGLQAVGLMPRQFANLGGNHRTQKRKRELKCPHCPSTFISNNNLRRHLFELHKNEIGYLPEPPKIECDLPNMCRRCNVKFETKGEWIEHKVAEARVMRPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKDQVIVPVERLESIKEQQQQPKQVQNQEQLQKQSTAQSHSQQQQQQQPERQSEDVDIMPKFKKIKIPSLPQKQEVDEESRESTKDQYYDDDDDDDDDEEDDGEGDVEAEVDNNENKVGVKEQAQKQQQQQQQQQQQQLQRPVEEYDEDDEDEAVEGAVFDDLAVGAQQTVGGDEDVEEEDDDADGDEEEDDEDDSSDADDEEHSTNEDTNEAYILKNKPTSIAQTPRYNDTENDDVEDDDDDDDSDEFDDDEDDNSSTENRKTPSSAISNVGVKSRYSCDLCQLYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSRSSSSDVVAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760325;
- 90% Identity
- -
- 80% Identity
- -