Basic Information

Insect: Panzeria rudis
Gene Symbol: -
Assembly: GCA_956483635.1
Location: OY101448.1:5579917-5599514[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.2 1.4e+02 4.7 1.7 1 23 266 289 266 289 0.88

2 28 2.2e-06 0.00025 22.8 0.9 1 23 295 318 295 318 0.97

3 28 0.0044 0.5 12.4 1.6 2 20 360 378 359 381 0.92

4 28 0.0056 0.63 12.1 1.2 1 23 458 481 458 481 0.96

5 28 0.16 19 7.4 1.0 2 23 489 510 488 510 0.97

6 28 0.00093 0.11 14.5 3.5 2 23 556 577 555 577 0.98

7 28 0.12 14 7.9 0.7 2 20 590 608 589 611 0.94

8 28 0.0029 0.33 13.0 1.6 1 23 690 713 690 713 0.95

9 28 0.005 0.56 12.2 0.3 1 20 720 739 720 741 0.95

10 28 0.041 4.6 9.4 0.7 2 23 753 775 752 775 0.94

11 28 0.00026 0.029 16.3 0.3 2 23 790 811 789 811 0.97

12 28 7.1e-07 8e-05 24.3 3.7 1 23 817 839 817 839 0.99

13 28 0.052 5.9 9.0 3.1 1 23 983 1007 983 1007 0.95

14 28 0.99 1.1e+02 5.0 2.2 1 23 1044 1067 1044 1067 0.93

15 28 0.00058 0.066 15.2 0.4 2 23 1086 1107 1085 1107 0.97

16 28 4.2e-07 4.7e-05 25.0 1.9 1 23 1113 1135 1113 1135 0.98

17 28 0.095 11 8.2 2.4 1 23 1278 1302 1278 1302 0.96

18 28 1.4 1.6e+02 4.5 0.9 3 23 1341 1362 1340 1362 0.94

19 28 0.18 20 7.3 4.3 1 23 1425 1447 1425 1448 0.95

20 28 0.68 77 5.5 5.1 1 20 1455 1474 1455 1477 0.93

21 28 0.0087 0.99 11.5 0.2 2 20 1504 1522 1503 1524 0.93

22 28 0.011 1.2 11.1 5.2 1 23 1577 1600 1577 1600 0.97

23 28 0.07 7.9 8.6 1.3 1 23 1637 1660 1637 1660 0.97

24 28 1.8e-06 0.0002 23.1 0.5 2 23 1726 1747 1725 1747 0.95

25 28 2.6e-06 0.0003 22.5 1.4 1 23 1753 1775 1753 1775 0.99

26 28 0.00021 0.024 16.6 4.4 1 23 1781 1803 1781 1803 0.97

27 28 7.4e-06 0.00083 21.1 2.6 1 23 1809 1831 1809 1831 0.99

28 28 8.3e-05 0.0094 17.8 0.3 1 22 1837 1858 1837 1861 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.2	1.4e+02	4.7	1.7	1	23	266	289	266	289	0.88
2	28	2.2e-06	0.00025	22.8	0.9	1	23	295	318	295	318	0.97
3	28	0.0044	0.5	12.4	1.6	2	20	360	378	359	381	0.92
4	28	0.0056	0.63	12.1	1.2	1	23	458	481	458	481	0.96
5	28	0.16	19	7.4	1.0	2	23	489	510	488	510	0.97
6	28	0.00093	0.11	14.5	3.5	2	23	556	577	555	577	0.98
7	28	0.12	14	7.9	0.7	2	20	590	608	589	611	0.94
8	28	0.0029	0.33	13.0	1.6	1	23	690	713	690	713	0.95
9	28	0.005	0.56	12.2	0.3	1	20	720	739	720	741	0.95
10	28	0.041	4.6	9.4	0.7	2	23	753	775	752	775	0.94
11	28	0.00026	0.029	16.3	0.3	2	23	790	811	789	811	0.97
12	28	7.1e-07	8e-05	24.3	3.7	1	23	817	839	817	839	0.99
13	28	0.052	5.9	9.0	3.1	1	23	983	1007	983	1007	0.95
14	28	0.99	1.1e+02	5.0	2.2	1	23	1044	1067	1044	1067	0.93
15	28	0.00058	0.066	15.2	0.4	2	23	1086	1107	1085	1107	0.97
16	28	4.2e-07	4.7e-05	25.0	1.9	1	23	1113	1135	1113	1135	0.98
17	28	0.095	11	8.2	2.4	1	23	1278	1302	1278	1302	0.96
18	28	1.4	1.6e+02	4.5	0.9	3	23	1341	1362	1340	1362	0.94
19	28	0.18	20	7.3	4.3	1	23	1425	1447	1425	1448	0.95
20	28	0.68	77	5.5	5.1	1	20	1455	1474	1455	1477	0.93
21	28	0.0087	0.99	11.5	0.2	2	20	1504	1522	1503	1524	0.93
22	28	0.011	1.2	11.1	5.2	1	23	1577	1600	1577	1600	0.97
23	28	0.07	7.9	8.6	1.3	1	23	1637	1660	1637	1660	0.97
24	28	1.8e-06	0.0002	23.1	0.5	2	23	1726	1747	1725	1747	0.95
25	28	2.6e-06	0.0003	22.5	1.4	1	23	1753	1775	1753	1775	0.99
26	28	0.00021	0.024	16.6	4.4	1	23	1781	1803	1781	1803	0.97
27	28	7.4e-06	0.00083	21.1	2.6	1	23	1809	1831	1809	1831	0.99
28	28	8.3e-05	0.0094	17.8	0.3	1	22	1837	1858	1837	1861	0.91

Sequence Information

Coding Sequence: ATGACCGACGATATAAAGACCGAATGTTTTATAAATGGAATGCAATATAAATGTCGCACTTGCTTTGATCCTGGACGAACAGTCTACTCTCTTAAGGATGAGTGTAGCAACGCAAAAACTTGGTGTGATTTATTGAAGGACATTACTCGGGGACAGATAACCAATGATGATTTACTTCCAAATACATTGTGTTGTAAATGCTCGGTTAAACTTAAAAGTTCCTATGATTTTATACATCAGGTCCATGATGTGAATACAAAATATTCTCAATTATTGGTGATTTGTAACGATCCACTACAAGATGGGATTTCGACTGATCTGGATAAGTTAAACGACTGTTTAGCTGAATCAGCAATCGACTTACCACTTAACCAGTATATTCCAGAAATTAAGATAGAGGAAAACTTTTCAGATCCTTATAAGCTTGCTTTAAATAGCATTCAACCTGGAGACAGAGAAGCGAAATTGGAAAATGATGgcTTACGACAATCACAAGATTCTTTAGGGGATAACGAAGATTCCACATCATTATCTGAACATATAGAACAGaacaaaacatatttgaaaactaaGTCTCTGAATAAACGAAGAAAGATATACTTAGATGATGACCTCAATGAAAACGATGATAGAAATGAATTCAgCTCATCTAATGAAAGCGATTATATTCCATTAAATACACTAAAGAGGGAGAAAGTTAGCAGAAAAAGCAGTGACAGCAGtcAGCCAGTGAAACATAAGAAAGGTCGTCAAGATCCAGATTATtatgataaaatacaaaaagtcaATGATCGTTTTTTATGTCTGATATGTCAAAAAACATTCTCTTTACGGAAAGATTGCGGCCGACATATAGCATCGTTACACTTGCTCCAAACTCCATTTCCTTGTGAAATTTGTGGACAAAGTTTTGATCGCAAGGACAAGTTACAAAGACATGTTAAACGTTTCCATACTGCCGGAGTGTCATATCCACCCAGAGTGGTATCTCCGCCCAGAGTGGAATATCCACCCAATCATAAGGAATGGTTATTTGGAGATCGTTTATACTACAAACCAGTTGCTTGGAGTCTTGTTCAATGTAAATTATGcgatacaaaatttaaaacgacTAAAGAACTTCGTCAACATTTACCAAAACACAGCAATTTAGACAGTCTTCACCAAATTGAACTAACCAGTGAATGTGTCCAACATTTGTTTGGAAATATGATTGATTTAAACATCGTCAAGGAAAGCATTTGCAAAGACATTCGCGATAAACATTGGTTTAAATACTACACtgtcttaaataaatattcgtATGAAATGTCCATAAGTGATACGGAAACTGAAGATTTGGTAGAAGAAACTGCAGATCttgccaaaaaatataaatgtgattTGTGTGCTAAggagttttcatttaaatatcaAGTTTTCTCCCATTTAAAGGAAGCTCATAGCGAagacaaaatttctttgaagTGTAATCTTTGCAAGCTAGAATTTATTTCAGTCAAGATGTACGAACAACATTCTAAAACTCACTGTCGTAATAGGCATAAGGTTTTGCTTTGTGCACATTGCCCAGCGAAGTTTGTTTGgcctgaaaatataaaaaatcacaaTTGCGCCACCAAACTTCAACTGATCATACCGGCACATTCGAGTAAAGCCCAAATGAAGTGTAATATATGCAACCGCAAATTTaagctaaaaactaaatttgaaaaGCATTTGTTAACGCACAAAGATGGAAGGCTTTCATCTACCAACACTATAATACGTTGTGGTCTTTGTGCACATTCATTCGAAAAACTTCGAAATTTGCGGCAACACATGCCGTTGCATGCCGATGGCAAGACTGGTATAGACTTTAAAGGCAGTATTTATGTAAAACGTTTTGAACGTTCGAAATCAATTGACTTTGCTTTATTACAACATGAAATACAAAATGCTTATAGAAAATCACAAATCAGTCGTTTTTACCGAGCAATTGATAGGGACGGAAATGAACTGGACATTTTAGATTCGGATAGTGACTCAGACGAAAGCAATCTTAatcagaaaattataaaaaaagaatacaagTGTCAACTCTGTGATGCAGTATATAAAAGACGTAACCTTTTATTAGCTCATCAACATGAAAAGCACAATGGTGTACCATTGCCTTTTACGTGTAAAGACTGTACTCAACAGTACGTAAGTAATGATTTGCTACAGCAACATTTAGTAAGAGATTGCTGGAATGAACATCGACGAATAGCTCAACAATGTGACTATTGTAATGCTCGCTTTATATGGCAAAACAATCTTCGGAAACACAAAGAAATTCAGcataaaaatcaaaaacattcAAAACCTCAAAGAGCCAGTACTCTGAAATGTGAGTATTGTGAAAAAGTGTTCATATGGCCTAAAGATTTGGTGCGTCATAGAAGAACGCACACCGAaggaaaaaaattcacatgccCTCATTGCGATCGCAAATTTCAGCGTAAAGACAATTTATTGACTCACATAAGAACACATTGCGCTGATGGCATTCCCACTGTGTTAATTCCGGGTAAAAGTATCGACTGCATTCTACCACATTTATTAAAACCACATGGATGCAAACGCATCAAATGCATGATCTGTTTTTCAGAACACAATCGCATACGCGACCTACGATCCCATTTACGGACACATCGGTATGTTGTTAATTTCGATAAAAGGAAAGAAATCGAAACTTTGGATGTAATATCATCTCAACTCTATCCCGATGAACCACTACCTTTGTCAGAAGAGATATTAGAAAAACGTATTGGATTTGATATAGCAtcggaaaaaaatttggaacgattttactctataacaaatgaaaatggCTACGAAGTTTCCTTAGACAGTTCTGAAACGGAAAGTGACTCTGATGATGGCGATACAGAAGATGAAGAAGACGATAAATCGAAACGTATTTATAAATGTGATATATGCCCTAAATTGACTTTTCATCGTAAATATAAACTTTTCgctcatcaaaacaatgaacaTACGTGGGAGGAAGCTCGCCATGTTTGTATACACTGCAATGGGCGATTTCTTTCGTCATATATGCTGCAGCTACACTACAAGGATCAAtgtaaaaatgccaaaaaacgTCATTTTTGTCGACATTGTCCGTTACGTTTCATGTGGAAGAGTAATATGAATGCTCACATCGTAATGGAACATGGGCACGAGcataaaaatcaaaaacactCAAAACCTCAAGGAGCCAGTACTCTGAAATGTGAGTATTGTGAAAAAGTGTTCATATGGCCTAAAGATTTGGTGCGTCATAGAAAAACGCATACCGAAGGAAAACAATTCACATGTCCTCATTGCGATCGCAAATTTCAGCGTAAAGATAATTTATTGGCTCACATAAGAATACATTGCCCAGATGGCATACCCATAGTGTCAAAACAGGGTCAAAGTATCGATTCCATTCTACCACATTTAATAAAACCACATGGATGCAAACGCATCAAATGCATGAtttgtttttcagaacacaaTCGCATACGCGACCTACGATCCCATTTACAAACACATCAGTATGCCGTTAAttttgataaaagaaaagaaatcgAAACTTTGGATGTAATATCATCTCAACTCTATCCCGATGAACCACTGCCTTTGTCAGAAGAGATGTTAGAAAAGCGCATTGGATTTGATATTGCAGCGGAAAATAATTTTGAACGTTTTTACTctataacaaatgaaaatggCTACGAAGTTTCTTTAGACAGTTCTGAAACGGAAAGTGATTGTGATGATAACGATAGAGATGAAGAAGACGATAAATCGAAACGTATTTATAAATGTGATTTATGTCCTGAATTAAGTTTTCATCGTAAATATAAACTTTTCgctcatcaaaacaatgaacaTAAGTTGGAGGAAGCTCGCCATGTTTGTATACACTGCAATGGGCGATATCTTTCGTCATATATGCTGCAGCTACACTACAAGGATCAatgtaaaaataccaaaaaacgtaatttttgtCGACACTGTCCGCTACGTTTCATGTGGAAGGATAATATGAAAGCTCACATCGTAATGGAACATGGGCACGAGGATCCCAGGGCTCCTGGACATTTTCAAAGATTGGATGGGTCATGGATGGAATCCATATATGTACTTATGAACACACGCTTTGCTGGCTGTAGAGAAGTAGGAAGTATAGCAATGATGGTGGAGATTATTGGTTCCTTGTCGGGACCAGAAATAGATGAGATCGATTCAGATCGAGGTCATGAATGTTTTCTTTGCCAAGAAAAGTTCTTATCCCAAAAAGAACTTAACCGACATTTGGTCACACATCACTCTTCCGATGGCGAACTTCATTATTGCCTACTTTGCCCGAAAACATTCTTTAGCGTGGAACATCTCAATGACCATTTGAGTTGCCACCACATAACCACAGCGAACATCAAGTCCGTTCAGAGTATAATACATTCCACATGCTGGCCAAATGGGAAAAAATCAATGAAATGCAAAATCTGTGAGCTTAGTTTTGAAACAATGGACAATCTGAGGGAACATTTTTCATCCAGAAACCCACAAAACTTGTGTGCCAGCCACCATTCCTTGGCAAATTACACAGCTACTAATCAAACGGGATTCGAGCTACATTTAGAACTAGACTCTGAAACAGAAATAGAAGATGCTGTGGATCAATGCAAAGGACATACAAATACAGTTTATCCCTATAATTGCTGTATGTGCAGCATGTCGTTTAAAAGGAAATATCAAATTTCTCAGCATCAGCGATCATTGCATAATTACGAATTGTTAGAGTTAAAGTGTGAACGTTGTATTTTTAGGACAGTCTCACAGAAAATCTTAGATTATCATAAAGCTACGCAGTGTTTCAACGCTGAAAAACAATTCGAATGTGAACAGTGCAAATTCAAATTTATGTGGCAAGAGAATCTTGAGAATCACATTTTTACGTTTCATAACGCAAAAGAGTTGTCCAAAGGAACTGATTTTATATCCATGGCATCTTCTAATGAGCCTATACCAACCAATGTCAAAAATTATACCAATATTTTTGATCGATATAAAGCTCACTTTAAGGAATTGACACCAGACAAGAATATTCGTAATAGAAAAGTTCGGAAACAGTCCACACCAAAAAtgcataagaaatttttgtgtGCCTTTTGTGGCCTCTCCTTTTCAAGCAATTCAAACCTTACGGCACACATTAGAAGACATACTGGAGAGAAACCGTTCAAGTGTGATCACTGTGAAATGGCCTTTCCACGTACATCTGAATTGCAAGCTCACCAACGCACACATACTAGCGAACGtccttacaaatgtattcaCTGCGACAAATCATTTTCGCGTcaatacaaattaaaagttCATAATCGTATACACACCGGCGAACGTCCATACGAGTGTTCGTTttgccagaaatcatttaaacaGTCTAACGATTTAACACTACATTTACGGCGTCATACTGGCGAAAGGCCTTATACATGTGACATTTGCGGTAAAGGTTTTATACGTGGTACATCTCTTAAACGACATCGTATTTCTAAGGGTCATCAGGAAGAAAAAATGGATTTAGAAATGAGCATGCAGCAGTTGACAAACTTCGATATGAAATTCTAA
Protein Sequence: MTDDIKTECFINGMQYKCRTCFDPGRTVYSLKDECSNAKTWCDLLKDITRGQITNDDLLPNTLCCKCSVKLKSSYDFIHQVHDVNTKYSQLLVICNDPLQDGISTDLDKLNDCLAESAIDLPLNQYIPEIKIEENFSDPYKLALNSIQPGDREAKLENDGLRQSQDSLGDNEDSTSLSEHIEQNKTYLKTKSLNKRRKIYLDDDLNENDDRNEFSSSNESDYIPLNTLKREKVSRKSSDSSQPVKHKKGRQDPDYYDKIQKVNDRFLCLICQKTFSLRKDCGRHIASLHLLQTPFPCEICGQSFDRKDKLQRHVKRFHTAGVSYPPRVVSPPRVEYPPNHKEWLFGDRLYYKPVAWSLVQCKLCDTKFKTTKELRQHLPKHSNLDSLHQIELTSECVQHLFGNMIDLNIVKESICKDIRDKHWFKYYTVLNKYSYEMSISDTETEDLVEETADLAKKYKCDLCAKEFSFKYQVFSHLKEAHSEDKISLKCNLCKLEFISVKMYEQHSKTHCRNRHKVLLCAHCPAKFVWPENIKNHNCATKLQLIIPAHSSKAQMKCNICNRKFKLKTKFEKHLLTHKDGRLSSTNTIIRCGLCAHSFEKLRNLRQHMPLHADGKTGIDFKGSIYVKRFERSKSIDFALLQHEIQNAYRKSQISRFYRAIDRDGNELDILDSDSDSDESNLNQKIIKKEYKCQLCDAVYKRRNLLLAHQHEKHNGVPLPFTCKDCTQQYVSNDLLQQHLVRDCWNEHRRIAQQCDYCNARFIWQNNLRKHKEIQHKNQKHSKPQRASTLKCEYCEKVFIWPKDLVRHRRTHTEGKKFTCPHCDRKFQRKDNLLTHIRTHCADGIPTVLIPGKSIDCILPHLLKPHGCKRIKCMICFSEHNRIRDLRSHLRTHRYVVNFDKRKEIETLDVISSQLYPDEPLPLSEEILEKRIGFDIASEKNLERFYSITNENGYEVSLDSSETESDSDDGDTEDEEDDKSKRIYKCDICPKLTFHRKYKLFAHQNNEHTWEEARHVCIHCNGRFLSSYMLQLHYKDQCKNAKKRHFCRHCPLRFMWKSNMNAHIVMEHGHEHKNQKHSKPQGASTLKCEYCEKVFIWPKDLVRHRKTHTEGKQFTCPHCDRKFQRKDNLLAHIRIHCPDGIPIVSKQGQSIDSILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLQTHQYAVNFDKRKEIETLDVISSQLYPDEPLPLSEEMLEKRIGFDIAAENNFERFYSITNENGYEVSLDSSETESDCDDNDRDEEDDKSKRIYKCDLCPELSFHRKYKLFAHQNNEHKLEEARHVCIHCNGRYLSSYMLQLHYKDQCKNTKKRNFCRHCPLRFMWKDNMKAHIVMEHGHEDPRAPGHFQRLDGSWMESIYVLMNTRFAGCREVGSIAMMVEIIGSLSGPEIDEIDSDRGHECFLCQEKFLSQKELNRHLVTHHSSDGELHYCLLCPKTFFSVEHLNDHLSCHHITTANIKSVQSIIHSTCWPNGKKSMKCKICELSFETMDNLREHFSSRNPQNLCASHHSLANYTATNQTGFELHLELDSETEIEDAVDQCKGHTNTVYPYNCCMCSMSFKRKYQISQHQRSLHNYELLELKCERCIFRTVSQKILDYHKATQCFNAEKQFECEQCKFKFMWQENLENHIFTFHNAKELSKGTDFISMASSNEPIPTNVKNYTNIFDRYKAHFKELTPDKNIRNRKVRKQSTPKMHKKFLCAFCGLSFSSNSNLTAHIRRHTGEKPFKCDHCEMAFPRTSELQAHQRTHTSERPYKCIHCDKSFSRQYKLKVHNRIHTGERPYECSFCQKSFKQSNDLTLHLRRHTGERPYTCDICGKGFIRGTSLKRHRISKGHQEEKMDLEMSMQQLTNFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -