Prud011651.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- -
- Assembly
- GCA_956483635.1
- Location
- OY101448.1:1266861-1268501[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 7.9 1e+04 -1.9 0.7 17 43 221 244 218 245 0.63 2 9 0.00025 0.32 12.5 0.3 6 43 239 274 238 275 0.82 3 9 3.8 4.8e+03 -0.9 0.1 22 43 288 306 287 307 0.76 4 9 6.9e-06 0.0088 17.5 0.5 18 44 316 339 309 339 0.93 5 9 8.6 1.1e+04 -2.0 0.3 17 29 355 367 350 378 0.72 6 9 0.0095 12 7.5 0.6 6 25 373 392 368 404 0.83 7 9 0.0017 2.1 9.9 0.4 6 29 402 423 397 435 0.80 8 9 0.076 96 4.6 1.7 6 39 429 459 425 466 0.87 9 9 0.22 2.8e+02 3.1 1.1 14 38 465 486 458 490 0.81
Sequence Information
- Coding Sequence
- ATGGAAACTGAAGCAATTATTCTCGACGATGCTGATACCAATAACGATTTTAATAACATGGACCCAGATCCTTTCCAAAATACACAAAAGAATGATGGTAAAAGAAAACCAAGAGCTCGAAGATCGAAGAGCAAAAGCGTGAATATCTCAAATAGAAAAGCAACCAttcgaaaatcaaaaaaatgtagttttatagaaaatgaatCAATCAAAAGTAAATGCGAATCATCATTGCAGAATGAATATAAAACACGGCAGATCGAAAATGAGGATGTTGATAATGCCTTTGATTGGCAGGATAGTACGTTCCAAGAGCCAGATGATGGTTCGTCTGATAATGAAGTATTAAGTAAGAAGATTATACATTCCGATagagaagttaaagaaacaaaagaaaagcAACCAAGCAATATCaatttggaaaataattttctattctCAAATAATAGTTATACAGCCGAATCAATAAAGTCTGAAAATCAATATAAGAGGGATTTAAAAGAAGaAATTATTAAATCTGAACTAGGTTCTGAAGATGTCGTGTCAAGTGATAGCGAATTTAATGCTACTACAGACACATTGTCAAAGGCAATCAAAGTTGAGAAGAAAAAACGGCATTACATATTAAACAGTGGTCGTAAAAAAGGTTTAGCCAACAGGTATAAGTGCGACAAATGTCAGCATAAATTTGGACATAAACTCACACTAGACGCACACGTCAGGAAAGTGCACGAAGGCCAAAAAAAAGCGTTCAAATGCCAACTTTGTGAAAAGGCATATTCATTTATAGGTGGATTATCGACACACATTAGGGACGTTCACGAACGAAAACAAGACTCGTATGATTGTAGTGTACCGGGTTGTGATAAAAAGTATAGCAACTTTATAACCCTTCAACGCCATGTGCGATTCAAACATCTGAATATGGAAACGCCTCACCAATATGTATGTGAACAGTGCGGTGCTACATTTAAACAGAGTTCTAATTTACGTTATCACATGAAAACTCGCCATCCTACTGAAGACGATTTGAAGCGAAAAGAACTTCTGCCAAAGGATCGATTAGAATGCGAAGAatgtaaaaaatcttttcattcTCAATATACACTTAAGTATCACAAGCTGAGAGTGCATGCtgatgaaaaaaaattcgaGTGCAAGATTTGTGGTCGTCGAGTGGCAAAACAATTCATGTTGGACTCCCATATGCTGGTGCATTCTGACCAGAAAATGGCATGTAAGTTTTGCGGTCGAGAGTTTGTACGCAAATATCAAGTAGAAGCTCATATTAGAGCGGTACATCAGAAGCTAAAGCCTTTTCAGTGCCCTCATTGCAGTGAAAGCTTTGCCTCACGAAAAACATTACGCCACCACATATATATACACACTGGTGAAAAGCCATACGTATGCGACATTTGTGGACAGGCCTATCGCCAGCCAACCTGCTTGAAAAATCATCGTAAAATTCATAACAAGCTTAGTGCAAATAATGCAACCACAGCTCAGTCAGATAATCGAGGTTTCATtagtaattttgtaaaaaacgacGATTCATTGGCAAATGAGAAAAAAGCCTTAAAATAA
- Protein Sequence
- METEAIILDDADTNNDFNNMDPDPFQNTQKNDGKRKPRARRSKSKSVNISNRKATIRKSKKCSFIENESIKSKCESSLQNEYKTRQIENEDVDNAFDWQDSTFQEPDDGSSDNEVLSKKIIHSDREVKETKEKQPSNINLENNFLFSNNSYTAESIKSENQYKRDLKEEIIKSELGSEDVVSSDSEFNATTDTLSKAIKVEKKKRHYILNSGRKKGLANRYKCDKCQHKFGHKLTLDAHVRKVHEGQKKAFKCQLCEKAYSFIGGLSTHIRDVHERKQDSYDCSVPGCDKKYSNFITLQRHVRFKHLNMETPHQYVCEQCGATFKQSSNLRYHMKTRHPTEDDLKRKELLPKDRLECEECKKSFHSQYTLKYHKLRVHADEKKFECKICGRRVAKQFMLDSHMLVHSDQKMACKFCGREFVRKYQVEAHIRAVHQKLKPFQCPHCSESFASRKTLRHHIYIHTGEKPYVCDICGQAYRQPTCLKNHRKIHNKLSANNATTAQSDNRGFISNFVKNDDSLANEKKALK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01138273; iTF_01138274;
- 90% Identity
- iTF_01138273; iTF_01138274;
- 80% Identity
- iTF_01138273;