Prud037993.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- grau
- Assembly
- GCA_956483635.1
- Location
- OY101450.1:115016616-115021196[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.2 2.8e+03 -0.1 0.1 14 28 152 166 146 179 0.70 2 7 0.015 19 6.9 1.5 18 43 211 233 204 234 0.92 3 7 0.012 16 7.1 0.4 15 33 236 256 234 260 0.76 4 7 0.32 4.1e+02 2.6 0.3 13 27 264 278 257 284 0.81 5 7 5.8e-05 0.073 14.6 1.3 6 33 286 312 283 319 0.81 6 7 5.3e-05 0.068 14.7 2.3 13 44 319 347 310 347 0.87 7 7 4.6e-05 0.058 14.9 0.2 17 43 355 378 352 379 0.94
Sequence Information
- Coding Sequence
- atgatattaCAACAGGAAAATTCAAATGATCACTCCTGCATATGCCAAGCATGTTGGCAAGAAATACATAATTTCCATAACTTCTACTTAAGTATCGAAAAAGCTCACAGAAACCTAAACACTATAATAAATTCAGAAATAGTTTTCAACGATGTTTTAAACGACAAAGAAGACCTGTATGAACAAATTTTCATTGATAGCAAAGAAAACTCTCCACTTGAATCTGAGATTTTATTATCGATGGAAAAAGATCCTTTAGAAGGTCCCACTGATATAAACAAACCAGAAAATAATAAAGCTTCTGATGAATTTGTCGTAGAAACACAACATGATGAACATTTTAACGATCAAAATGAAAGTTTTGAAAGTGATGATGATTTTACCTCAAATTCTGCTGCTGATTCATCCAAAATAGAAGAATTACATCAAGAACAGGACAAATTTATTGCCGAAAATTTCCAAATTACCTGTTCCCTTTGTAAAATCCCACTGGCTTCATATGCCATAATGACTACACACAACAAAGAGCAACACAATCAGCGTGGATATGCTACTTGCTGTAATCAAAAGCTTCATACTCGTTCACAAATAGTGGATCATATTAAGTTACACCAATATCctgaatattttaaatgtaaacaatgCGATGAAAAATTAACTAGCCGTTCGAACCTAAAGCTGcacattaaaaatgttcatgaaACGCAAAATAATGAATGTGACATATGTGGCAAAAGTTTAGATAATAAATCAAGTCTGAGAACGCATAAATTACTACACGATGccgacaacaaaaataaaataccctGCAAACAATGTGATAAGACCTTCTTCTCTTCACGTTTCTTAAACGATCATGTGCGCCTTGTTCacttagtaaaaaaatatataatatgcaATATATGCGGTAAATCGCTATCGAACGACTCTACATATAATCGACACATGGTAGAGCATGAAGGAAAAATAAGTTGTAAAGTTTGTGGTCGCATTTTATCCGATCTGCCATGTTTAAATCGACACATGCTCTCCAATCATCCTCCAAATGGAGTGAAACCTGAAGTTAAATGTCCTGTGtgctcaaaaatatttacaaatactcGCAATCTTAAAACGCACGTATGGCGGGTACACGAAAATAAATACGCAAGAAAGTGTACATTGTGTGAGAAAACATTTAAGTGTCTTGCAGCCTTAAAGgATCATATGGCTTTTCATACTGGTAAACCTTTAAAAGCTTGTGGTTTTTGCCCTAGGAAATTTTGCTCAAATGGTAATATGTATACTCATCGTAAGAAGATGCATCCTAAGGAATGGCAGGaatctttgaaaaaatattttgttgcaaatgtGTCAGAGAAATAG
- Protein Sequence
- MILQQENSNDHSCICQACWQEIHNFHNFYLSIEKAHRNLNTIINSEIVFNDVLNDKEDLYEQIFIDSKENSPLESEILLSMEKDPLEGPTDINKPENNKASDEFVVETQHDEHFNDQNESFESDDDFTSNSAADSSKIEELHQEQDKFIAENFQITCSLCKIPLASYAIMTTHNKEQHNQRGYATCCNQKLHTRSQIVDHIKLHQYPEYFKCKQCDEKLTSRSNLKLHIKNVHETQNNECDICGKSLDNKSSLRTHKLLHDADNKNKIPCKQCDKTFFSSRFLNDHVRLVHLVKKYIICNICGKSLSNDSTYNRHMVEHEGKISCKVCGRILSDLPCLNRHMLSNHPPNGVKPEVKCPVCSKIFTNTRNLKTHVWRVHENKYARKCTLCEKTFKCLAALKDHMAFHTGKPLKACGFCPRKFCSNGNMYTHRKKMHPKEWQESLKKYFVANVSEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01138357;
- 90% Identity
- iTF_01138357;
- 80% Identity
- iTF_01138357;