Basic Information

Gene Symbol
ct
Assembly
GCA_956483635.1
Location
OY101451.1:101260573-101289566[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.7e-27 1.3e-22 81.0 0.0 3 72 614 684 612 689 0.94
2 3 7.2e-32 1.2e-27 97.1 0.0 3 77 1041 1116 1039 1118 0.96
3 3 7.3e-31 1.3e-26 93.9 0.0 3 77 1295 1370 1293 1372 0.96

Sequence Information

Coding Sequence
ATGTTGGTGGTACAAAAGattAAAGCCTTATTTGAGGAAGTAAAACGTTTAAGAAGCGCAGAAAAAACTCATTTAATACAAATTCATCGTTTAGAAGAACATTTGGAAGCCAAGCGCCAGCACATTATACATTTGGAGTCCAAGCTAGATAAACAGCAAATTAATGAAGTATTACAAGAATCCCAAAAACAGGAAAAAGAGCAACGGGAAGACGATCTTAACAATGACTGTGAAATGTTGGAGGTTAATGAATCAGCTAACCAAGAGGAGGACGATGATGAAAATGAAGTgcaagaaattgttaaaaatagaaACTGTGATTTAACGACACGCCTGGAAGAGAAACAACGAGACGAACATGATGACGCtgatgaagatgatgatgacgatgataatattaaccaaaatgaaaataatcaaaattccGCTGACTTAGAAGAAGAGTGTACAAATACTAAAGACTCTCTTAAAGATTTACAAATCAAAAAGGAAACACAATCACCTTTATCATTAGACTCAATTAGCCAACAAAATGCCATTGCTGCAGCTGCTGCGGCTGCCGCTGCCTGCAATAATGATCCCAATAAATTCCAAGAACTATTAATGGAACGCACTAAAGCTTTGGTAGCCGCTGAAGCTTTAAAGAATACCGAAGAAACTAATATAGTTAACGAAGAGCCACAATGTTTAGATACAAATGAAAATGTTGCTAGttcaaataacattaaaaaaccaGATGTTGAGGAAATTGTTGAACCCTCAAAAGTGCCAAAAATAGAAATACTAGATGATGATGAGGAAGATTTAAGACCAACATCGAATGTGATTGCTAATGATGATGCTACGGCCAAAACAGATTTATGCGCCAGCATAGATTTAGAGGTTTTGGATACAACAGCACCAACAATGGAGGAAAAGTCTATAGAAGAAGATGAAGAAGATTCAACAACATATAAACACAATGTTGaacgttttggtactttgttggGTGAAGAATTGGTAAATTCCTATTGGCGTCGAGGTTTTGATCATACAAAATCTTTGTATGCACAACAAacccaacaacaacagcagcaacatctgcaacaacagcaacaacaacgcTCTttgcagcagcagcaacagcaacatcaCCAACATCATCAGCATTTAATGCTGCAACAGGCTAACGtccatcatcatcaacatcatcatcaacagccaatacaacatcatcatcaacagCCTACTCAAACGCATTTATCACAACCACCTTGTGGTCCCTCTTCGACCACCTTGCTTAGTCAATTAGTTAATTCTACTTTTTCCACTCCCAACTCTAATACTTCAACTCAATCCTCTTTACGTTCTGCAGATGTTTTTACACATTCGCAACCTGTTCCACATCATCATCACCAGCATCACCACCTGCACCATCAAATGCCTGCCCATTTGGCCGAAAATCATGATAAGTCGTCGTCACTTAATCATCATGATTCATCGGCTTCCAGTGCCAGTACACCCAACTTGCAAGAACCACGCAACAATGATGATCATCATAGTTTATCTTTGAATGGTTCTCTCAAGAATTTGGAGGATAATAACAATAGTTTATGTGCTACACCCACCAGTCATCATATGGGCGCTGGTGGCCATCCCTCACATTTGCCTCATGGCTTTTTGCCTGGTCTACCATTCCAATTCCAAGAACGTGGTCACTTTCGTTTTGCTGATGATTTGCAATTACCTCCTGGCACTTCTATGGCTGGCCGTTTGGGTGAGTCATTGATACCTAAGGGCGATCCCATGGAGGCCAAATTACAGGAAATGTTGCGTTACAATATGGACAAATATGCCAATCAAGCCTTGGACACTTTGCATATTTCACGGCGCGTCCGTGAATTATTATCGGTACACAATATAGGCCAGCGTATATTTGCCAAATATATTTTGGGTCTATCACAGGGGACTGTCTCCGAGTTGCTATCAAAGCCCAAACCCTGGGATAAGTTGACAGAAAAGGGGCGTGACAGTTATCGCAAAATGCATGCCTGGTCTTGTGATGATAATGCTGTTATGCTACTCAAGTCTTTAATACCTAAAAAAGaTTCTGGCTTACCTCCTTATGGCAGTGGTGGTCGTGATGATTCAATGTCTGATGAACGTAtagctcatattttaaatgaagcttCTTCGTTAATTAAATCATCTGGTCCTCCTTCCATGCATCAACAGCATGAACATCAAAGAAGAGCTTCTACTATACCAGAAGATTCACGTAGCAATGATGATTCCAAGTCACCTCATCCACCCTGCTCATCGCCATTCTTCAAAGAGCATCACAGCAAGTCTCAAGGTGAAACGGTAATGCCCGGTCAAGGTCACATGCGTCCAGATGACATGAATCCCGAGAAAATGGCCCGGTTATATCAAGAGCTTATGGCCAGAGCTCCCCGTGAAGCTTTTCCAGGatttttgttaaatcCCTTTTTTAGTGGCGGTTTGCCTGCAGCTGCCGGCATGGGTGCCAATGCCTTTCCCGGTTTGGCGGCCGATGAAAATATGCGCTTAGCTTTCGAACGGGAAATGTCTAAATTGCAACAGCACCAACATGCTGCCGCCCAGCCGCCAAACTTTGCCAATTTCTCTAGTCTTATGGCTTTGCAGCAGCAAATGTTAAACGGCGCCCAGGATCTAACTTTGACTACTGATGATAAACCCAAGGATAGCAACAAGATTAATGGTCAACGTAGCTCTTTTGAAGGTTCTCAAAACTCACATAGCAATCATGGGCAGACGACACCAAACGCCAAAGATTCTAGCTCCTCAGAAGTGGAAAGACTTTACCCGGGCATGGTGAAATCAGAGCAGGGCAGCAAAACTCCAGCTCCTTTGACTTCAAGTAATGCTTCAACCACCAACACCAACTCGGCTGCACCCAGTCCTCTCAGCAACTCCATACTCCCGCCTGCTATGACAACCAATGAGGAATTCTCCTCCACCGCCAGCCCTCTACAAAGAATGGCCTCTATAACTAACTCGTTGATAACACAACCACCTGTACCACCTCATCATAATCCTCCTCAAAGGCCAACTAAAGCCGTATTGCCTCCCATTACCCAACAGCAATTTGACATGTTTAACAATCTTAACACCGAAGACATTGTGCGCCGTGTCAAAGAAGCTTTATCACAATATTCTATATCCCAGCGTTTGTTCGGTGAATCTGTATTGGGCTTATCTCAAGGTTCGGTATCCGATCTCTTAGCCAGGCCCAAGCCCTGGCATATGCTTACCCAAAAGGGTCGGGAACCTTTTATACGtatgaaaatgtttttggaAGATGAAAATGCCGTACACAAACTGGTGGCTTCTCAGTACAAGATTGCTCCCGAAAAGTTAATGAGAACCGGCAACTACAGTGGCTCGCCACAAATTCCTCAGGGTTTGGCCAATAAAATGCAGGCCTCTTTGCCCATGCAAAAAATGATGAGCGAACTGAAATTGCAAGAACCGGCTCATATCATGCAACAAATGCAAGCTGCAGCCGTTATGTCAGCAGCCATGCAACAACATCATCAACAGCAAGCTGCAGCTGCCCAACAATCTCAACAACAAGCTGCTCAGGCTGCTGTACAGGCAGCCCAAGCTGCAGCCGCTGCCCAGGCGGCCCAACAGCATCATCAAAGTATGCTACTGACTTCACCTGGACTGCCTCCTCAGCATACTATTGCATTGCCCACGGCCAATTCTCAACCTACATCGGGCAACAGCACACCAGCCGGTCCTACACCCGATAAGAAGCCCATGATGATGCCCATACATTCACCCCACCAAGGCAATGCAATGCGCAATATGCACCAGCATATGTCACCCACCGTTTATGAAATGGCTGCTTTAACACAAGATTTGGACACTCAAGTTATCACCACCAAAATCAAGGAGGCCCTGTTGACCAACAACATAGGCCAAAAGATATTTGGAGAAGCTGTTTTGGGCTTGTCACAGGGCTCAGTATCGGAATTGCTTAGCAAACCTAAACCCTGGCATATGTTATCCATCAAAGGACGTGAACCTTTTATACGCATGCAATTGTGGCTGTCGGATGCCAACAATGTAGAACGTTTGCAGGTTTTGAAGAATGAAAGACGGGAGGCTTCAAAGCGTCGACGTTCTACGGGACCCAATCAACAGGACAACAGCTCGGATACTTCCAGTAATGACACCAATGATTTTTACACCAGCAGCCCTGGACCAGGCTCAGTAGGGAGCTCTGGAGCTCCGCCCAATAAGAAGCAACGAGTTTTATTCTCTGAGGAACAAAAAGAAGCCTTAAGATTAGCGTTTGCCCTGGATCCTTATCCCAATGTAGGAACCATTGAATTTTTGGCCAGTGAATTGGGTTTGGCAACGCGCACTATTACCAATTGGTTCCACAATCATCGTATGCGTTTGAAACAGCAAGTGCCTCATGGTCCACCCGGTCAAGAAACCAATATACCCACTAGAGAAAACACCACTTCTACACCCTTTGATCCCGTCCAGTTCCGCATTTTATTGCAGCAAAGGTTGTTAGAACTGCACAAGGAACGCATGGGTTTGAGCTGTAATACACCTTTGCCCTATCCGCCCTACTTTGCAGCGGCTGCTTTATTGGGACGTTCTTTAGCTGGCATGCCAGGCACCAATCCCCAGACCGCTTTGCCCACCAATGAGGCTGAATTAAGAGCTCTCAATCAGGCATTTAGAGAACAAATGTCTGGCTTAGATTTGTCTATGAGCTCTTTGAAACGTGAACGTACCACCGATGACTTTGAAGATGACATGGATGAAAGTCATATGTCGGAAAATGAAAACGAAGATTTAGATGATGAGGATAAAACCAGCGATTATAGAAATTCCACCTTATGTAGCATGAATGCCCAGCAATTTTTGAATAATATGCGTTTGAACAGAAGAAAACCGGCCGCACCACAATGGGTTAACCCGGCTGTGCCAAACATCAATGAAGCTGAACGCATTATCAATGGTGTATGTGTGATGCAGGGCGAAACAGAAGTCCAACAACAAACTGCCAAtgaagaagatttacataaatcCCTCGACCATGAAGACAATGATATGATGGAAGTGTCTCATCAATCGGTAATGGAACCTGAAGTACTGATCAAACAAGAAAAAGAAGACTGTGAAAGTGATAGTGAAAAGACAAACACCGAGGAGGCTGCAGCAATAAGCGAGGAAAGAATTAAGTTGATACAAGAAGAAAAGCTAAGAATGGTGCGTGTCAATCGTTTAAGTAATGAAGATGAAACATTAGCTGCAGCCAATAATGCACCAGCAGCAGCGTggaattattaa
Protein Sequence
MLVVQKIKALFEEVKRLRSAEKTHLIQIHRLEEHLEAKRQHIIHLESKLDKQQINEVLQESQKQEKEQREDDLNNDCEMLEVNESANQEEDDDENEVQEIVKNRNCDLTTRLEEKQRDEHDDADEDDDDDDNINQNENNQNSADLEEECTNTKDSLKDLQIKKETQSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNTEETNIVNEEPQCLDTNENVASSNNIKKPDVEEIVEPSKVPKIEILDDDEEDLRPTSNVIANDDATAKTDLCASIDLEVLDTTAPTMEEKSIEEDEEDSTTYKHNVERFGTLLGEELVNSYWRRGFDHTKSLYAQQTQQQQQQHLQQQQQQRSLQQQQQQHHQHHQHLMLQQANVHHHQHHHQQPIQHHHQQPTQTHLSQPPCGPSSTTLLSQLVNSTFSTPNSNTSTQSSLRSADVFTHSQPVPHHHHQHHHLHHQMPAHLAENHDKSSSLNHHDSSASSASTPNLQEPRNNDDHHSLSLNGSLKNLEDNNNSLCATPTSHHMGAGGHPSHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGSGGRDDSMSDERIAHILNEASSLIKSSGPPSMHQQHEHQRRASTIPEDSRSNDDSKSPHPPCSSPFFKEHHSKSQGETVMPGQGHMRPDDMNPEKMARLYQELMARAPREAFPGFLLNPFFSGGLPAAAGMGANAFPGLAADENMRLAFEREMSKLQQHQHAAAQPPNFANFSSLMALQQQMLNGAQDLTLTTDDKPKDSNKINGQRSSFEGSQNSHSNHGQTTPNAKDSSSSEVERLYPGMVKSEQGSKTPAPLTSSNASTTNTNSAAPSPLSNSILPPAMTTNEEFSSTASPLQRMASITNSLITQPPVPPHHNPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLANKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHHQQQAAAAQQSQQQAAQAAVQAAQAAAAAQAAQQHHQSMLLTSPGLPPQHTIALPTANSQPTSGNSTPAGPTPDKKPMMMPIHSPHQGNAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLASELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTTSTPFDPVQFRILLQQRLLELHKERMGLSCNTPLPYPPYFAAAALLGRSLAGMPGTNPQTALPTNEAELRALNQAFREQMSGLDLSMSSLKRERTTDDFEDDMDESHMSENENEDLDDEDKTSDYRNSTLCSMNAQQFLNNMRLNRRKPAAPQWVNPAVPNINEAERIINGVCVMQGETEVQQQTANEEDLHKSLDHEDNDMMEVSHQSVMEPEVLIKQEKEDCESDSEKTNTEEAAAISEERIKLIQEEKLRMVRVNRLSNEDETLAAANNAPAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01109239;
90% Identity
iTF_00759983;
80% Identity
iTF_01137889;