Prud030614.3
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- kn_1
- Assembly
- GCA_956483635.1
- Location
- OY101450.1:1541161-1546819[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-119 6e-115 386.3 0.0 205 385 1 210 1 213 0.99 2 2 2.8e-09 3.6e-05 23.8 13.8 422 505 213 303 209 314 0.71
Sequence Information
- Coding Sequence
- ATGCGTAGATTTCagGTTGTCATATCTACGCAAGTGAGTGTTGAGGGCCCATTATTGGCGATTTCGGATAATATGTTTGTACACAATAATTCAAAACATGGACGCAGAGCTAAACGTTTGGATACAACGGAAGGTACAGGCAATTCCTCTCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTACGATGGCTTATATCCACCCTTACCAGTAGCCACACCCTGTATTAAAGCTATTTCACCGAGCGAAGGTTGGACCACTGGTGGTGCCACCGTTATAATTGTTGGAGACAATTTCTTTGATGGTCTACAGGTTGTCTTTGGCACAATGTTGGTGTGGAGTGAGTTAATAACATCACATGCCATACGAGTCCAAACGCCGCCCAGACATATACCGGGTGTAGTCGAAGTAACATTATCCTACAAAAGTAAACAGTTTTGCAAAGGCTCACCCGGACGCTTTGTTTATGTTTCAGCCCTCAATGAGCCCACCATCGATTATGGTTTTCAACGACTGCAAAAGCTAATACCACGACATCCTGGCGATCCCGAAAAACTACAAAaggaaattattttgaaaagagCTGCTGATTTAGTGGAAGCTTTATATTCAATGCCAAGATCGCCTGGTGGATCGACTGGCTTCAATTCATATGCTGGTCAACTGGCAGTGAGCGTACAAGATGGTAGTGGCCAATGGACCGAAGACGACTACCAGAGAACACAGTCGAGCAGTGTTAGTCCAAGAGGAGGCTATTGCAGCAGTGCGTCTACACCTCATAGTTCGGGAGGAGGTTCTTATGGTGCTACGACTACGGCAGCCACAAATGGTTATGGCGCTACGCCAAATATGGGCACTTTGTCATCTTCACCTGGCAGTGTTTTCAATTCCACATCAATGTCCTCAACTTGGCACCAGGCTCTGGTACAACATCATCACTCGCATCCCCACCACTACCATCACCCGCATCAGCCATGGCACAATCCAGCCGTTTCTGCAGCCACAGCAGCCGtttaa
- Protein Sequence
- MRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGATPNMGTLSSSPGSVFNSTSMSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109082;
- 90% Identity
- iTF_01132709;
- 80% Identity
- -