Pger027568.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- nfxl1
- Assembly
- GCA_963678705.1
- Location
- OY783216.1:2340108-2343592[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 3.8e+04 -5.0 1.9 15 19 160 164 160 164 0.85 2 21 0.15 2.8e+03 -0.5 0.8 4 10 195 201 194 201 0.95 3 21 3e-08 0.00057 20.9 17.0 1 19 209 226 209 226 0.99 4 21 2e-06 0.038 15.1 17.6 1 18 262 279 262 280 0.97 5 21 1.4 2.6e+04 -3.6 1.0 6 10 305 309 304 309 0.88 6 21 0.00012 2.2 9.4 12.2 3 19 317 333 315 333 0.92 7 21 4.3e-06 0.08 14.0 5.3 1 18 368 385 368 386 0.96 8 21 0.0058 1.1e+02 4.0 2.5 1 12 395 406 395 406 0.96 9 21 9.2e-08 0.0017 19.3 16.7 1 18 420 437 420 438 0.98 10 21 3.3e-08 0.00063 20.7 15.2 1 18 447 464 447 465 0.98 11 21 0.82 1.5e+04 -2.9 0.8 5 10 493 498 493 498 0.89 12 21 0.0025 47 5.2 6.8 10 19 514 523 511 523 0.90 13 21 0.012 2.2e+02 3.0 6.7 1 12 532 542 532 542 0.96 14 21 0.88 1.7e+04 -3.0 5.8 14 18 570 574 570 575 0.89 15 21 1.6 3e+04 -3.8 0.5 9 12 592 595 592 595 0.77 16 21 0.00047 8.8 7.5 6.2 1 12 613 624 613 624 0.97 17 21 2 3.8e+04 -6.5 3.3 6 10 641 645 638 645 0.66 18 21 1.1e-06 0.021 15.9 12.4 1 19 653 670 653 670 0.93 19 21 0.36 6.9e+03 -1.7 1.0 8 13 675 680 674 681 0.80 20 21 6.2e-05 1.2 10.3 10.6 1 16 717 731 717 737 0.94 21 21 1.9 3.6e+04 -4.1 1.2 6 10 767 771 766 771 0.86
Sequence Information
- Coding Sequence
- ATGTGGGGCCGAGGACAAGCAAGGAAAAATCAAGTTCGTCCAGAGAACAAAAGGTCTCAACAAACCTTCAATCAAGCAGCAGCAGATGGAAAGTTTGTAGAAGCACAACAAAGATTTCAAGCTGCGATTAAAAAGCATGGCATAGAATACGAATCATCTTCCGAAGAAGAGGAATTGGAGAGCAATCATATATTAGAAGCGGTTCTTTCATCTTATTCCCAAATTGGAGGCTCTGCTAATGATTTAGGAAGAACTCATCGGTTTTTGGAAGATGCGTTTCAATCCAATGCAGCAACATGCCTCATTTGCATAGGCTCTGTGAAGCGCTCCGATGCTATATGGAGTTGTCAAGGATGCTTCTGCTTTTTTcatttatcttgtatacaacgGTGGTCCAAGGATAGTTTATTTCAGCAAAAATCAGCGTTGGAGGAAGTTCCGCAGtggacaagaaataaaaaaattataaattgggGTTGTCCAAAATGTCGCAAAGAATATACTGCAGACgagGTACCTCGTAAATACAGTTGCTTCTGTGGCGCCGCTGTAGATCCACCTGTACATCCATGGTTAGTGCCCCATTCTTGCGGGGAAACATGCAATCAACCGTTGCAACCTGAGTGTGGACATAAATGCTTGCTATTGTGTCATCCTGGACCTTGCCCTCCTTGTCCAAAGACAATATCAGTGTCATGTCTTTGTGGCCAGTCTCCCAAAAAACCAGTGCgttgttctattaaaaattgGGAGTGCACATCAAAATGCTCAAAATTATTGTCTTGCGGAGTTCACAAATGTTCTCACACTTGTCATAAATCACCTTGTCCTCCATGTAATGAAGAAAGTATTCAAAGATGTCGATGTGGAGGCAAAAAAGAATTAAGGCGATGTTCCGAAGAAGTTTGGCAATGTGATAAGGTATGTGAAAAACTTCTGTCTTGTCAATTGCACAAATGTGACATTCAGTGTCATGCGGGCAATTGTGGAAAATGCCCAAGAAGTTTACCACGAAAATGTCCTTGTGGTAAACAAGATTTTATTGCACCTTGTTCTGAAGATGTTTCGCCTTGTGGAGATACATGCGGCAAGCTATTGACTTGTGGAGTTCATTTTTGTGAACAGAGATGCCATAGATTTGATTGCAGTAACTGTTTGGCTGTTGTTGTAAAAACGTGCAGATGTGGTAACCACAGCAAGGAGCTGCCGTGTCACAAGGAATATTTATGCGACTCAAAATGTAAGCAAGTTAAAGACTGCGGCAAACACTCATGCAATAGAAAATGTTGCGATGGAAATTGCCCTCCATGTGACAAACCTTGCGGTAGAACGTTGAAATGTGGACGACATAAGTGTCCATCACAGTGTCACCAGGGTCCTTGCTATCCATGTGTTTCTATTTCAACTGTGCACTGCAGATGTACAAAAACAAAGATACAAGTTCCTTGTGGAAGAGAGAAGAAAACAAAACCTCCAAAATGCAATAATCCTTGCAAATTACCTACATCTTGTCATCATAAAACAAGTACTCCGCATCGGTGCCACCTAGGAGACTGTCCAGATTGTAAACAATTATGTGGTCGGGTGATGTCCTGTGGACATGTGTGTAACACTACATGTCATGATGCGGTTCCAGTAGTGTTGGAAAATAATCCTCGACCTGTTGGACCATGGGAAGTTCGACAAAGTATCGTTATAAAAGCATTGCCATGTCCACCTTGTGAGTATCCTGTAACATTCAGTTGTCTTGGAGATCATGAATCTCCTATGTGGCCTTGTCATGAAGCATCTAAAGGAACAAGAAGCTGCGGACGAAAATGCGGCAGAGCTTTATCATGTGGAAATCATTTATGTGAATTGGAATGTCATAAAGTATTGGGTGCAATTTCAGAAAAAGCTGCTGGTAATAATTGCAAAGCATGCGAACTGCCATGCCAATACCCTAGACAACCAGGGTGTAGTCATACATGTACTAGACCATGCCACTCAGGAAAATGTGCCGCTTGCTCTGTACTTGTGAAACAAACATGTCACTGTGGAATTACTCAACTTTATTTGGAATGCAAACTACTATTTGGAGAATTGGCTACCgaggaaaatataaataaaaaacgatCATGTGGAAACCAGTGCACGAAACTATACCCTTGCGGCCATCGTTGCAGAGATGACTGTCACCCCGGTCTTTGTCAAAATGCAGATCTGTGCCACAAACGCGTGAAGTACTTCTGCCCATGTCGGCGCATTAAAAAAGACGTCCCATGTGATAAAATTAGAGGAGGAGAAGTAAAAATTGAATGCGATGAAACATGTAATGAAAAACGACGACGAGAAGAAAAAATACTGCAAGAACAAGAAGTACAGCGAAAACTTAATGAGGAAGAACGAAACAAAAAGGAGGTTGAactatttgaaaaaaagttttcaAAGAAAAGGTATAAAGAGAAAAATCGTAatgaaattaaagaactgcCGGAAAATAAGTGGAagaatatgtttattattttttcggTTTTAATTGGAGTTATCGCTGGAATTTATTATGCTGTTGTAAgtgcaaattaa
- Protein Sequence
- MWGRGQARKNQVRPENKRSQQTFNQAAADGKFVEAQQRFQAAIKKHGIEYESSSEEEELESNHILEAVLSSYSQIGGSANDLGRTHRFLEDAFQSNAATCLICIGSVKRSDAIWSCQGCFCFFHLSCIQRWSKDSLFQQKSALEEVPQWTRNKKIINWGCPKCRKEYTADEVPRKYSCFCGAAVDPPVHPWLVPHSCGETCNQPLQPECGHKCLLLCHPGPCPPCPKTISVSCLCGQSPKKPVRCSIKNWECTSKCSKLLSCGVHKCSHTCHKSPCPPCNEESIQRCRCGGKKELRRCSEEVWQCDKVCEKLLSCQLHKCDIQCHAGNCGKCPRSLPRKCPCGKQDFIAPCSEDVSPCGDTCGKLLTCGVHFCEQRCHRFDCSNCLAVVVKTCRCGNHSKELPCHKEYLCDSKCKQVKDCGKHSCNRKCCDGNCPPCDKPCGRTLKCGRHKCPSQCHQGPCYPCVSISTVHCRCTKTKIQVPCGREKKTKPPKCNNPCKLPTSCHHKTSTPHRCHLGDCPDCKQLCGRVMSCGHVCNTTCHDAVPVVLENNPRPVGPWEVRQSIVIKALPCPPCEYPVTFSCLGDHESPMWPCHEASKGTRSCGRKCGRALSCGNHLCELECHKVLGAISEKAAGNNCKACELPCQYPRQPGCSHTCTRPCHSGKCAACSVLVKQTCHCGITQLYLECKLLFGELATEENINKKRSCGNQCTKLYPCGHRCRDDCHPGLCQNADLCHKRVKYFCPCRRIKKDVPCDKIRGGEVKIECDETCNEKRRREEKILQEQEVQRKLNEEERNKKEVELFEKKFSKKRYKEKNRNEIKELPENKWKNMFIIFSVLIGVIAGIYYAVVSAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -