Pger020190.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- stc
- Assembly
- GCA_963678705.1
- Location
- OY783210.1:11461377-11465987[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 3.8e+04 -4.3 1.6 15 19 525 529 524 529 0.81 2 13 2 3.8e+04 -6.1 9.1 4 19 558 573 556 573 0.80 3 13 4.1e-05 0.78 10.9 20.6 4 19 574 589 566 589 0.90 4 13 7.2e-07 0.014 16.5 13.6 1 18 625 642 625 643 0.97 5 13 3.8e-07 0.0071 17.4 11.3 1 18 683 700 683 701 0.97 6 13 1.4e-06 0.027 15.5 14.6 4 18 749 763 742 764 0.88 7 13 1.3 2.4e+04 -3.5 2.2 5 10 793 798 793 798 0.93 8 13 0.0011 20 6.3 8.3 1 19 804 826 804 826 0.89 9 13 1.6e-09 2.9e-05 25.0 12.5 1 19 831 849 831 849 0.98 10 13 2 3.8e+04 -4.1 1.2 6 10 878 882 877 883 0.71 11 13 2 3.8e+04 -4.7 9.2 9 19 895 906 885 906 0.74 12 13 6.3e-07 0.012 16.7 14.2 1 16 942 957 942 967 0.87 13 13 0.0003 5.6 8.1 15.3 3 19 975 993 974 993 0.93
Sequence Information
- Coding Sequence
- aTGGGTGATTGGGAACACAAGGGTGGCCTTCCAAAGAGCCCGGAGTGCTACTCAACATTTAATAATGGATAcgataatttaaattatgaatttgTTAATAACGGATATGAGCCTCAACGATATGAAAGTACTGCAAACTCTAGCCGCTCGTATGAATATAATGGTTATAACGAACCGTATATAGCACCTGCATACCAAAATGCATCACAAGATTATGTTGGGTTTAACCAATTTTTATCTCAATTACAAAACCAAAACTGGCCCCCATCCAATTCTAGAGATCCCACTGCTTCAAGCATGAATTCTTTTCACGCACAGGAAAATAGTTCTACCAAACAAATAGGTATGAGCATTGGTGCAAGCAATTCAAATCTTACACCAACTGCTCTTGAATTTGTtcctaaacaaaaaaattatgaaactacATATTATTCACAATCAAATCCACTCTTAGAAAATGAAAGAGGCGATATGGATGTTACTAAACAATCAGACATAAAGTATGAAGATATCCACgataatagtaaatataaagcaaataaaaaggaatataaatatgAAGAGAATGTAGACAAAAAGCTTGGTAGAAATCGAAATGAACATAAGGAATATGAGAAAAAAAATGGTCgggaaaaatattctaattctGTTGATTGGAGACGTTCTGATGAACCACGAAAATATGAAAGATACAACAAAAAAGAATATGACAGTCGTAACTCTGACAGGTACGAAAAATTTGATAGAAATGATCGTACTGAAAGAAACGGGTCTAGAAATAATCCAATCGAGAAAACAGAGAGAAATGGTGAAAGGCAGAATGGTAGAAATGACTATTATCAAAGTGAAAGGTTTGGGAATGCACGTAATAAACGGAATACATTTGATCCTAAAAATTCTCAAAGTAAACGGAATGGTAGAAATGATTACGAGAATTATGACGAACAAAATGATCAAGAAAGAAGAGGTGGCGATCGTAACGAAGAAAAGATCTCTTACAGAGAATCTGATCGAGAAGATTATAGAAGAGATAATAATCGAGAAGATTTTTATGATAGAAATTATAAGGAGGATAATAGGCAATATCGCAGAGATTCGCAGACTGAAGATAACAGGAGAAATAGAAATTCTTACAGGAATGACTACGAGCGAGATGATAGAGAAATGCGCAAAGAGAGAGTTACTATGAAGAATGATAGATATCAGAGGCGCGGAAATGATAGAGAAGATTTTAATTCTAAACGGGAAGACTATTTCAAACGAGATCAAGAAGTAAATGATTCTGATCGTAAGCGAGGAAAAGATTACAAAAAAGATTCTGTAGAAGTAAAACATAATCTTAAATTTAATGGTAGGCAAGACTTTTTGGAGACTGTGGAATCAGAAGCCCCGGGATCTCAACGTGAACGATTAACAATTGCTCTGGATAGAGGTACACTAGAGTGTTTAGTTTGTTGTGAAAGAGTGAAACCACAACAATCTATTTGGGCTTGCGCTGGCTGTCACCATGTATTACATTTGCAGTGCATAATAAAATGGGCAGCAACTAGTAAAGTTGAACAAGGATGGCGTTGCCCTGCTTGTCAACGTCTGAATTCAAATATTCCAAGAGATTACTATTGTTTCTGCGGAAAAATGCGTGATCCTCCATGGAATAGACAGGATTCTGCTCATTCATGTGGTGAACTATGCGGATGTGGAGGGCCTCCACCTTGCCCCCATAATTGTACTTTATTATGCCATCCTGGACCATGTCCTCCTTGTCAGGCACAAGTTAATAGAAAATGTGGTTGTGGAAGAACTAATAGAACAGTTCAATGTAGCCAAAATGACCCTCTAGTTTGTGAAGCGATTTGTTCTAAGCCTTTAAATTGTGGGGTACATGAATGTAGTAAGCAATGTCATGAAGGTCCTTGTGAAGATTGTGATGTACAAATAGACCAAGCATGTTTTTGCGGAAAGTCGACAAGGCAAGTTCAGTGTACAGTTGAAACTGCgcatattacaaaatatgaatgtgGTTCACCTTGTGATGCCTTATTAACCTGTGGAAGCCACAAATGTAAACTCCTATGCCATGAATTACCATGTCCATCTTGTGAATTGGATCCTGCCACTGTAAAGACCTGTCCTTGTGGAAAGAAATCGCTACCACCCGGGTCTAGGAAATCTTGTCTATGTCCTGTACCTTTATGCGACGAAATTTGTAATAAACCATTGAAATGTGGGCCTCCAAGCCAACCCCACACGTGCCAAACAAAATGTCACTCAGGCCCGTGCCCTGTTTGTGTATTGGAAACTCTTGTTCGATGCAGATGTGGACATATGGATCGTGAAATTGCTTGCTCGCAATTAACAAGTAGAGCCGATGACGCTCGCTGCCAAAAAAAGTGTACAAAGAAAAGGGAATGTGGCAGACATAAGTGTAATGCATTTTGCTGCATTGCTTTAGAGCATCCATGCCCCTTACCTTGTTCTCATACTTTATCATGCGGATTACACAAGTGCGAACAAAATTGTCATCGTGGAAGATGTCAACCATGTTGGAGATCTAgTTTCGAGGAGCTATATTGTGAATGTGGAGCTAGTGTTCTTTACCCTCCTGTGCCTTGTGGAACAAGGAGACCTCAATGCGATAAACCTTGTACTAGAATTCATTCTTGTACCCATCCAGTTATGCATACTTGTCATAGTGATGTTGAATGTCCTCCATGCACAGTTCTaagttctaaatggtgtcatgGCAAGCATGAGATGCGAAAAACAATTCCATGTCACCAAACTGATTTCTCTTGCGGCAAGCCATGCGGAAAACCTTCGCCATGTGGACGACATACATGCCAACTTCCTTGTCATACTGGAGAGTGTTTACGAGAGGGTCAGACATGCACACAACCATGTACTATCATAAGAACTACTTGCGAGCATCCCTGCAAAGCTCAGTGTCATGATGGGCCCTGTCCTGATACCCCATGCAAAGAAATgGTGAAAGTTACTTGCGAATGTGGACACCGGTCAACAAGCCGTGCTTGTGCAGACACTGCAAAAGACTTTCAGAGAATAATCACCGCACGTTTAGCGTCTAAAATGGCTGATATGCAACGAGGCCAAACCGTTGATATACAAGATATAATGAGTAATCGACCTGGCAGTTTGAAAACATTGGAATGTACTGAAGAGTGTCGTATCATAGAGCGCAATAGACGTTTAACTGTTGGTCTTCAAATAAGAAATCCTGATCTTAGTGCTAAATTAAGTCCACGTTATTCTGAATTTCTCAAGCAATGGGCTAAACGTGACCCTACTTTTGTGCAAAATATACATGAAAAACTTACTGAACTTGTACAGTTGGCTAAACAATCAAAACAAAAGACGCGTAGCTACTCATTTCAGCGTATGAATCGTGAGAAACGCCAGGTGGTTCATGAAATGTGTGAACAATTTGGATGCGAGGGCAAAGCGTATGATGCTGAACCAAACAGAAACGTGGTGGCTACAGCAGATAgggaaaaaTCTTGGCTTCCAAGTTTAAGTTTGATGGAGGTTGTGCAACGTGAATGTGGTCAACGAAAAGTTCCAGTTCCATCTATGGGGTTAGTTAGAGCTCCACCGAAACCCCCAAAAATCTGA
- Protein Sequence
- MGDWEHKGGLPKSPECYSTFNNGYDNLNYEFVNNGYEPQRYESTANSSRSYEYNGYNEPYIAPAYQNASQDYVGFNQFLSQLQNQNWPPSNSRDPTASSMNSFHAQENSSTKQIGMSIGASNSNLTPTALEFVPKQKNYETTYYSQSNPLLENERGDMDVTKQSDIKYEDIHDNSKYKANKKEYKYEENVDKKLGRNRNEHKEYEKKNGREKYSNSVDWRRSDEPRKYERYNKKEYDSRNSDRYEKFDRNDRTERNGSRNNPIEKTERNGERQNGRNDYYQSERFGNARNKRNTFDPKNSQSKRNGRNDYENYDEQNDQERRGGDRNEEKISYRESDREDYRRDNNREDFYDRNYKEDNRQYRRDSQTEDNRRNRNSYRNDYERDDREMRKERVTMKNDRYQRRGNDREDFNSKREDYFKRDQEVNDSDRKRGKDYKKDSVEVKHNLKFNGRQDFLETVESEAPGSQRERLTIALDRGTLECLVCCERVKPQQSIWACAGCHHVLHLQCIIKWAATSKVEQGWRCPACQRLNSNIPRDYYCFCGKMRDPPWNRQDSAHSCGELCGCGGPPPCPHNCTLLCHPGPCPPCQAQVNRKCGCGRTNRTVQCSQNDPLVCEAICSKPLNCGVHECSKQCHEGPCEDCDVQIDQACFCGKSTRQVQCTVETAHITKYECGSPCDALLTCGSHKCKLLCHELPCPSCELDPATVKTCPCGKKSLPPGSRKSCLCPVPLCDEICNKPLKCGPPSQPHTCQTKCHSGPCPVCVLETLVRCRCGHMDREIACSQLTSRADDARCQKKCTKKRECGRHKCNAFCCIALEHPCPLPCSHTLSCGLHKCEQNCHRGRCQPCWRSSFEELYCECGASVLYPPVPCGTRRPQCDKPCTRIHSCTHPVMHTCHSDVECPPCTVLSSKWCHGKHEMRKTIPCHQTDFSCGKPCGKPSPCGRHTCQLPCHTGECLREGQTCTQPCTIIRTTCEHPCKAQCHDGPCPDTPCKEMVKVTCECGHRSTSRACADTAKDFQRIITARLASKMADMQRGQTVDIQDIMSNRPGSLKTLECTEECRIIERNRRLTVGLQIRNPDLSAKLSPRYSEFLKQWAKRDPTFVQNIHEKLTELVQLAKQSKQKTRSYSFQRMNREKRQVVHEMCEQFGCEGKAYDAEPNRNVVATADREKSWLPSLSLMEVVQRECGQRKVPVPSMGLVRAPPKPPKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -