Basic Information

Insect: Panorpa germanica
Gene Symbol: Znf541
Assembly: GCA_963678705.1
Location: OY783207.1:20376014-20392680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00036 0.023 16.1 0.2 2 23 161 182 160 182 0.97

2 6 5e-06 0.00033 22.0 1.3 1 23 188 210 188 210 0.99

3 6 0.0002 0.013 17.0 2.6 1 23 216 240 216 241 0.95

4 6 0.001 0.067 14.7 0.8 2 23 431 452 430 452 0.97

5 6 0.02 1.3 10.6 0.4 2 23 1307 1330 1306 1330 0.93

6 6 0.00049 0.032 15.7 0.4 1 23 1355 1377 1355 1377 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00036	0.023	16.1	0.2	2	23	161	182	160	182	0.97
2	6	5e-06	0.00033	22.0	1.3	1	23	188	210	188	210	0.99
3	6	0.0002	0.013	17.0	2.6	1	23	216	240	216	241	0.95
4	6	0.001	0.067	14.7	0.8	2	23	431	452	430	452	0.97
5	6	0.02	1.3	10.6	0.4	2	23	1307	1330	1306	1330	0.93
6	6	0.00049	0.032	15.7	0.4	1	23	1355	1377	1355	1377	0.98

Sequence Information

Coding Sequence: ATGGATCCTGATGAGGTGCCAGGATTTCTTCCCCTGACCGAGTATCTCCCTAATACGTGTCAACTTCTAATGTCTGCAGCGATGGGTGCAAAAGGAGAAGTCACCTTACAAATACGTGAGGGTGAAAACATTCCTGATAACACTGCTGCAGGATTCTTAGCACGATATACGCATGATGATGGTTCTATAGCCATCGGCTATCCAGACACTGAAATGTTGTCCGGCATATTGGGAAAATTCCATACAGCGGGAACAGGCGAATCAGAAACAGAAGGTTCAACATCATTTGAGTTATTGGAAAACTGCACAGATCAGGAGTTGCCAGCGCCACTATTAGGAGGATCTAGAAGTCCTGAAGAAGCTGAAGGCTaTTCCGATTCTCAAACTACACCAACTACGCCTCCTAGTGATACAACAAGACTCCAGACCGGAAAGAAACCACGTCCTAAGGCAGCATCCCCAACACGTCAAGGGCCGCAACAGTGTcagGTGTGCAGCAAAATCTTTGGTAATGCTTCAGCTCTTGCAAAACATAAGCTGACTCACAGTGATGAACGCAAATATGTATGTACGATGTGTGCGAAGGCATTTAAGCGGCAAGATCACCTAAATGGACACATGTTGACACATAGAAATAAAAAACCTTACGAATGTAAAGCTGATGGCTGCGGTAAATCGTACTGCGATGCAAGATCTCTGCGGCGTCACACTGAAAATCATCACAGTACGGGGCATTCCAGGGACTCGACACATTCCGGACATTCAAATAGAGCGGAGAATCATCCAACCAGTAGCGCCGTGACGCTTTCACCCGCCACTGCATCAGGTGATGCATCATCTCCTCATGGTGCAACCTGTATACAATACGCTTCGACCGGAGCAATAGGTAGTACGACTTCTTCAGCTGGTGGTAAAACTACGTCTGGAAATGCCCACACAAAATCAACACCAACAACTACAGCAGACaatagtaaaaataatgatgGCCTTACACGGCAACAGCTTGAACTAATTAGTCAAATCATGcaacaaacaaaacaacaacAATCGGCCGAGATTGCTACTGCGACAGCAACCTCAACAACTAATAGGCCAATGAATGTGCGGGGATCAAAGAGTAAGCCGCCAAGAACATGGAACATGCAGACGCAACTTCAGCAGAATCAAAATAAACCAGCAACTGCAGCAAAATCTCCAGTGTCTCAGTCTTCTCCAGGAGTAACTGTAAATGGAACATCAGTATCTACTATACAAAATGGAGTCGCGAAGCAAATTGAACAAAAACCAGTAGAGTGTAATTTATGTcatcgaaaatttaaaaatattcccGCTTTAAATGGTCACATGAGACTGCATGGCGGGTACTTTAAAAAGgataacgaaaataaaaaatgtgaaaaGAAGGAAGCTAACATGCCTCCTCTAACAACGGCTAGTGCAAACGTACGCTCAATGATTGAAGAGAAAATACTAATCAAGCGAGGAGCTGGAGGTCTCCCACCAGACACAGTGACCAGCACGACCAATTCGATCTCATCGTCAATATCTGCGACATCCGCGACAGTCAGCAGTACTACTAATATTACAAAAGGTTTTGCTGTGCCGGCAACGCCGCCAGTGCTCTCTAGACGCAATTCCGAATCAGATCCGTTTCTTTCGCCTAAAGCGATTTTGACAGATAGTAATAACACAGTTGTTTCTGCTAAAGACGCTACTCTTATCGAGCTGTTAAGAAGGGGTACAAAgGTGTCTGTGAAACGAGCTGTATCTGATCCGGGACAAGGTCATGTTCAACTATCGCTTAGTGGACCTGGCGGAGATATGTTTACCCTTGCCTATCAAGGGGGGGTTTCTGCTTCAGGATACTATTCGCAGGAAGAAATCTACCATGTACAAGATACAGCTATGCTCCTTCAAGCTGTAGACTCCATTCAATTACTTCATGATACTTCTGCAGCTGAACAATTAGATGATATAGCTTCCTTGGAAGATTACGCGACAGTTACAGCCTCTCTACAACAAGAGCAACAACCTACAATAAATAGTAATGTGGGGACTCCAACAGCTGTTTACACTGTTACAACCAGCCAAGATGTTTCCAGTACTGTGGGTAGCACAACTGTGTTTAATGGTACTCCTGTTAACCAAGAGTTACAAGCTGTGCTGGACTCACCATTGCCTGAAAGTTTAGTAGAGTTTGGGGCATACCATTCACCATCTCCTAAAGATGTTTTGGGATTTCAAAAAGAgtATGTTATGTACACAAACTCCCCCCATTCCGCAATAACGGCACCATCTCCACTGCCATCTCCATTACGTTATCACGACTCTCCAGGGCTGGGATATCCGACACCTCCAGCAAGCCACGAAACTCAATCTAGCCAACATAGTCCATCTACCAACTCCCATAACAATTTCATGGACGATAAAGGATTTAGTATGGATTGTGATCGACAGGACGCTGATTCACCGCTATCTACAACATTTTTTCTTTCCACAAGTTCATCAGGAGTTCATCACCAACATGTTAACAGTGGAGTAACATTGAATACTCAAAGTGCAGATTCAACGGGAAACCAGGGTTTCGTCGATCTTGGCGATGGTAACAGAGAATCAAATTCTTCTTTATCGGGTACATTTTTCGATACAAACCAAAACGGAAACGCGCAGACTTACAGTCTCGATGATGCCCGTCAAACTAGTTCCCCGTTATCAGCAGCATTCTATACCACAACTATGTCTAGTGCAGAAGAAGTTGAAGAAGCATTAGAAACAGTTCTTCCTGGAGAAAACATTCATGACGAACTAGATATTTATCCTCAAAGTCCAATCATCACACAATTACAGCTGCCTTATTTACCGGCAATCCTTCAATCTCAAATGATGCCAAATTCAGAGGATCCTTTACTTTCAAGTAGCCCAAAAGATTTTGCAAGTCGGAAAAAGTTTGATTTCTGTTCATATCCTGTAGTATATACCTTGCAGGATAAAAGGAAATTAGATGTGTTACAGAATCCAGCTCCATTAAATATATCTGTAGATAAtacaaaaaatgaaaacaatacaCCAAGTGATGTATTTTTAAGTCCTAATAGTGTATCCGCTAGTCCAAATCGATCTCGCAAACGATTACGTTCTGATGTGACTGCTCCATCAAAATCGGATTTTAAGTCGCGCCTAAGATCGTCGACGAATTATTACACCCCGTCACCAATACTGAATCCCTCTAGGATAGCACCAGGATTGTTCTCAACAATAATGTCTCGAAATGACGCAACTGTGTTTAATGACAATAATCCTTCTAATGTGACGAATTCCGTACAAAATGAAACCTTTAACATAGCAGGAGGACAACAAGCACCGAGAATAAATATTGGTGACGAATTCCAGTTGTCAATACCAGAACATCCCACGAGAGAGCAATGCAATGAAGATAGGGATCCAGTATATGAACACTTGCTCTGGGATCCAGGCATAATCATCAGGAGTTCACAGAAAGAAGCTGCAATGCAAAGGTATCTCGAGTTTGCCACATGTGCAGCAACTCCTGCAGGAGGTTACACACAAGAAGAAGCTTTAAAAGTACTATTGGAATGGAATGGGGATATTCAAGCAGCTAGTTTACAACTTCTTcaaaaaaatccaaaaatcCTAAACTACAAAGATCGTAGATCAGAAAGATGGTCAGCAGAAGAAATTGAACAATTTCTCAAAGGACTTTCCAAGTATGATAAGGACTTTTATTCCATTGCAAAGGAGatTGGTACAAAATCATCACATCAGTGTGTCGCGTTTTATTATCTTTGGAAACAATTATGCAATGATTATAAAACTCTTTATCTTGGTAGAACAGATATTTTAGCAGCCTCTTTAAACAACGAAGAAGTGTTATCTTCAGGACCTGACAACAGGACGCATGCATGTGAAGTGCCAGATTGTTCTGCGAGTTTTAGCTCCAGAGCTGCATTGCATGGCCACACCCGCATCCATTGCAGTGGGCGAACTACCACAGCTAGCCCACCCGTACATGGGGGTTCCAATGGCAACGATGCCTCGGATGAATACCCTTGCAAAATTTGTGGAAAGATATTCATCAAAGTAAAAAGTCGCAGTGCTCACATGAAATCTCACCGACCTGCGGATACGGAACTTCGCAGAGTTGCAGCTGAATCAACTTCACCAACAGGGGTTCCACTCCCATAG
Protein Sequence: MDPDEVPGFLPLTEYLPNTCQLLMSAAMGAKGEVTLQIREGENIPDNTAAGFLARYTHDDGSIAIGYPDTEMLSGILGKFHTAGTGESETEGSTSFELLENCTDQELPAPLLGGSRSPEEAEGYSDSQTTPTTPPSDTTRLQTGKKPRPKAASPTRQGPQQCQVCSKIFGNASALAKHKLTHSDERKYVCTMCAKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSTGHSRDSTHSGHSNRAENHPTSSAVTLSPATASGDASSPHGATCIQYASTGAIGSTTSSAGGKTTSGNAHTKSTPTTTADNSKNNDGLTRQQLELISQIMQQTKQQQSAEIATATATSTTNRPMNVRGSKSKPPRTWNMQTQLQQNQNKPATAAKSPVSQSSPGVTVNGTSVSTIQNGVAKQIEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDNENKKCEKKEANMPPLTTASANVRSMIEEKILIKRGAGGLPPDTVTSTTNSISSSISATSATVSSTTNITKGFAVPATPPVLSRRNSESDPFLSPKAILTDSNNTVVSAKDATLIELLRRGTKVSVKRAVSDPGQGHVQLSLSGPGGDMFTLAYQGGVSASGYYSQEEIYHVQDTAMLLQAVDSIQLLHDTSAAEQLDDIASLEDYATVTASLQQEQQPTINSNVGTPTAVYTVTTSQDVSSTVGSTTVFNGTPVNQELQAVLDSPLPESLVEFGAYHSPSPKDVLGFQKEYVMYTNSPHSAITAPSPLPSPLRYHDSPGLGYPTPPASHETQSSQHSPSTNSHNNFMDDKGFSMDCDRQDADSPLSTTFFLSTSSSGVHHQHVNSGVTLNTQSADSTGNQGFVDLGDGNRESNSSLSGTFFDTNQNGNAQTYSLDDARQTSSPLSAAFYTTTMSSAEEVEEALETVLPGENIHDELDIYPQSPIITQLQLPYLPAILQSQMMPNSEDPLLSSSPKDFASRKKFDFCSYPVVYTLQDKRKLDVLQNPAPLNISVDNTKNENNTPSDVFLSPNSVSASPNRSRKRLRSDVTAPSKSDFKSRLRSSTNYYTPSPILNPSRIAPGLFSTIMSRNDATVFNDNNPSNVTNSVQNETFNIAGGQQAPRINIGDEFQLSIPEHPTREQCNEDRDPVYEHLLWDPGIIIRSSQKEAAMQRYLEFATCAATPAGGYTQEEALKVLLEWNGDIQAASLQLLQKNPKILNYKDRRSERWSAEEIEQFLKGLSKYDKDFYSIAKEIGTKSSHQCVAFYYLWKQLCNDYKTLYLGRTDILAASLNNEEVLSSGPDNRTHACEVPDCSASFSSRAALHGHTRIHCSGRTTTASPPVHGGSNGNDASDEYPCKICGKIFIKVKSRSAHMKSHRPADTELRRVAAESTSPTGVPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01136718;
90% Identity: iTF_01136718;
80% Identity: iTF_01136718;