Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783218.1:8228354-8231345[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00096 0.062 14.8 4.1 1 23 199 221 199 221 0.97

2 11 3e-05 0.0019 19.6 1.5 1 23 227 249 227 249 0.98

3 11 0.0015 0.096 14.2 3.6 1 23 255 278 255 278 0.95

4 11 0.03 1.9 10.1 5.2 1 21 284 304 284 306 0.95

5 11 0.0003 0.019 16.4 1.9 1 23 312 334 312 334 0.99

6 11 1.5e-05 0.001 20.4 0.6 1 23 340 362 340 362 0.98

7 11 0.00076 0.049 15.1 1.4 1 23 370 393 370 393 0.97

8 11 0.0015 0.096 14.2 4.6 2 23 400 421 399 421 0.95

9 11 0.0035 0.23 13.0 0.3 1 23 427 449 427 449 0.98

10 11 1.7e-06 0.00011 23.4 2.2 1 23 455 478 455 478 0.96

11 11 1.7e-06 0.00011 23.5 0.6 3 23 494 514 493 514 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00096	0.062	14.8	4.1	1	23	199	221	199	221	0.97
2	11	3e-05	0.0019	19.6	1.5	1	23	227	249	227	249	0.98
3	11	0.0015	0.096	14.2	3.6	1	23	255	278	255	278	0.95
4	11	0.03	1.9	10.1	5.2	1	21	284	304	284	306	0.95
5	11	0.0003	0.019	16.4	1.9	1	23	312	334	312	334	0.99
6	11	1.5e-05	0.001	20.4	0.6	1	23	340	362	340	362	0.98
7	11	0.00076	0.049	15.1	1.4	1	23	370	393	370	393	0.97
8	11	0.0015	0.096	14.2	4.6	2	23	400	421	399	421	0.95
9	11	0.0035	0.23	13.0	0.3	1	23	427	449	427	449	0.98
10	11	1.7e-06	0.00011	23.4	2.2	1	23	455	478	455	478	0.96
11	11	1.7e-06	0.00011	23.5	0.6	3	23	494	514	493	514	0.97

Sequence Information

Coding Sequence: ATGGCTGCACATTTTGCGGCGGCAGGCATAAAGCTGGAGGGGACGGAGATTCAAACATACCTAGAAACATTCAATAAAGAAATTGAAGGAGTAGGTGACAATGTGACCCATGTATCAGaagTCCAGTCAGAATCTGAAGACAACGAAGGAACTTATTTTATAGATCAAACAGGGCACTATTACTTCCAAGCTAATGCCGATTCACAGCCTATGATGACTGTTGTTACACAAGAAGGAGATGAGAACGTTTCTTCTTTGGCTGACGACTCTGATCAAGTACTATTGAATAACTCAGAAGCATTCCAAGCAGTTACAATTGTTCAATCTGATACAAACCCTGGAGAAGTCAGTTATGTTCTTATTATGCAGCAGCCAGATGGAGAAGATGGTGAAAAAGGTAAAGTGCATCTTGAAggtgaagaagttgaagaggtTGAAATGGATATGGACGGCAATGAAAATGATTTAGCTGTATATGATTTCGATGAAAATGAAGAAATAGAAGAAAGTGTCGAAATTGATTCTGGAGCAGAAGATGACAAAtcgaagatattaaaaattttacctAAAAAATCGCAAACAGTTGCTCAAGCTCATATGTGTAATTACTGTAATTATACAAGCCCAAAgagatATTTACTATCGCGACATATGAAATCTCATTCGGAAGAACGCCCTCATAAATGTTCTGTTTGTGAGAGAGGATTCAAAACATTGGCATCTTTACAAAACCATGTCAACACTCACACAGGAACAAAACCACACCACTGCAAGTACTGCGAGAGCGCTTTTACAACTTCTGGAGAGCTTGTGAGGCATGTAAGATACAGACACACTCACGAGAAGCCCCACAAATGTCATGAATGTGATTATGCTAGCGTTGAGCTATCTAAACTAAAACGTCATATCCGTTGCCATACTGGAGAACGTCCATATCAGtgTCCGCATTGTACATACGCATCTCCAGATACTTTCAAGTTAAAGCGTCATCTGCGTATACACACGGGGGAGAAACCTTACGAGTGCGATGTGTGCGGATCTCGATTTACGCAGTCCAATTCATTAAAAGCTCATAAACTAACTCATAACGTCGATGAGAAACCAGTATTCCAATGCGAGCTTTGTCCTACAACTTGTGGTAGAAAGACAGACTTGAGAATTCACGTACAAAAACTGCACACGTCGGATAAACCTCTAAAATGTAAACGCTGTGGAAAGTCTTTCCCAGATCGATATAGTTATAAGATTCATTGTAAAACGCATGAAGGCGAGAAGTGTTTCAAATGTGAACTATGTGTATACGCCTCCATATCAGCACGACACCTGGAGTCCCACATGTTAATTCACACAGATCAAAAACCTTTTCAATGTGATGAATGCGATCAATCTTTCagacaaaaacaGCTGTTGAAGCGGCATCAGAACTTATACCATAATCCTGATTATGTTCCTCCACCTCCAAAAGAGAAAACAAATGCATGTTCTGACTGTGAACGAGTGTTTAGACACAAAGGAAATCTCATTAGGCATATGGCTGTACATGATCCAGAATCTAGCATCCAGGAGAAGGCCCTCCAATTAAAGATGGGGCGACAGAAGAAAATACAATACATTGATGGACAACAGGTTGAAGTAATGCCGGGGATGGATTACGATTCAGAAGATTCAGACAATGAAATGGTTGCCATAGACAATACTGATGGACAACAATATGTCGTTCTTGAAGTCATTCAACTTCAAGATGGGGAAGAGGATGGTGTTGTAGATGGTATGGATGATGAAAATGGGCCAGGCCATTTGGAAGGCGATTTCCTTTTACCAGAacatttggaTGATGACGATGTATTAAACTCTATCCGAGGAAGTCGAAAAGTTTCTCATCACCAACTGCATAATGACACAACTAGTGATATGCAAAATTGTTTTGGATTTGATgAAGATGATGAGGAAATGTCTCATGAATTGATTGAAgtagatgaagaagaagaacaaaATAAAAGCACTATCCAACTCTTGGAGCACATGGAAGACGATGATGATGAATAA
Protein Sequence: MAAHFAAAGIKLEGTEIQTYLETFNKEIEGVGDNVTHVSEVQSESEDNEGTYFIDQTGHYYFQANADSQPMMTVVTQEGDENVSSLADDSDQVLLNNSEAFQAVTIVQSDTNPGEVSYVLIMQQPDGEDGEKGKVHLEGEEVEEVEMDMDGNENDLAVYDFDENEEIEESVEIDSGAEDDKSKILKILPKKSQTVAQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKYCESAFTTSGELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDVCGSRFTQSNSLKAHKLTHNVDEKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSYKIHCKTHEGEKCFKCELCVYASISARHLESHMLIHTDQKPFQCDECDQSFRQKQLLKRHQNLYHNPDYVPPPPKEKTNACSDCERVFRHKGNLIRHMAVHDPESSIQEKALQLKMGRQKKIQYIDGQQVEVMPGMDYDSEDSDNEMVAIDNTDGQQYVVLEVIQLQDGEEDGVVDGMDDENGPGHLEGDFLLPEHLDDDDVLNSIRGSRKVSHHQLHNDTTSDMQNCFGFDEDDEEMSHELIEVDEEEEQNKSTIQLLEHMEDDDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -