Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783216.1:3202783-3216205[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.071 4.6 8.9 1.8 1 23 808 830 808 830 0.97

2 13 0.00019 0.012 17.0 2.8 2 23 836 857 836 857 0.98

3 13 0.0032 0.21 13.2 1.3 1 23 863 886 863 886 0.98

4 13 0.00055 0.036 15.6 2.5 3 23 904 924 902 924 0.96

5 13 1.8e-05 0.0011 20.3 0.7 1 23 930 952 930 952 0.98

6 13 0.00065 0.042 15.3 1.9 1 23 958 980 958 980 0.98

7 13 1.5e-05 0.00096 20.5 0.5 1 23 986 1008 986 1008 0.98

8 13 5.7e-05 0.0037 18.7 0.1 2 23 1015 1036 1014 1036 0.97

9 13 8.2e-05 0.0053 18.2 4.3 3 23 1051 1071 1049 1071 0.96

10 13 0.024 1.5 10.4 0.7 1 23 1077 1099 1077 1099 0.96

11 13 6.9e-05 0.0044 18.4 0.7 1 23 1105 1127 1105 1127 0.98

12 13 0.00037 0.024 16.1 1.3 1 23 1133 1155 1133 1155 0.97

13 13 1.7 1.1e+02 4.6 1.0 2 23 1162 1185 1161 1185 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.071	4.6	8.9	1.8	1	23	808	830	808	830	0.97
2	13	0.00019	0.012	17.0	2.8	2	23	836	857	836	857	0.98
3	13	0.0032	0.21	13.2	1.3	1	23	863	886	863	886	0.98
4	13	0.00055	0.036	15.6	2.5	3	23	904	924	902	924	0.96
5	13	1.8e-05	0.0011	20.3	0.7	1	23	930	952	930	952	0.98
6	13	0.00065	0.042	15.3	1.9	1	23	958	980	958	980	0.98
7	13	1.5e-05	0.00096	20.5	0.5	1	23	986	1008	986	1008	0.98
8	13	5.7e-05	0.0037	18.7	0.1	2	23	1015	1036	1014	1036	0.97
9	13	8.2e-05	0.0053	18.2	4.3	3	23	1051	1071	1049	1071	0.96
10	13	0.024	1.5	10.4	0.7	1	23	1077	1099	1077	1099	0.96
11	13	6.9e-05	0.0044	18.4	0.7	1	23	1105	1127	1105	1127	0.98
12	13	0.00037	0.024	16.1	1.3	1	23	1133	1155	1133	1155	0.97
13	13	1.7	1.1e+02	4.6	1.0	2	23	1162	1185	1161	1185	0.89

Sequence Information

Coding Sequence: ATGACCATTCTTTGTTCAAGGTTATCAATACAATTGCCGGATTCAGTTGCAGGACGATTTGCTGCAGGGGCTTTGATTTTGTGTCCTTTGGTAGCTTCGGATGAAGGAGGAGTTGGTGCAGCTTTTGCAGTTTGTTTAGCTGCAGTTACTGCTTGTGCTATAGTTTACTGCAAAGAAGCTTTAAAACCTCTATCTCCACCTTATTGGCGAGGTCGTGGAGCTGGTGCTTTGCTACGGTTTCTGTCGATATGGTTAGAAATTTTAAGCCTCTTGAGCGCATGCGCCATGTGTGCTCGAGTCCTCAGCGCTTGCCTCGATTCCATGACCGGAGGAAAAGCGAGGATCATGCTTCTCGGAAGAGAAACATTTCCACAGGAAACTTGGCCAGATGTTTTGGGAGTCTCCATTATTATATTAGTCACGGGCATGTTCATGTTAGGACTTGAGAATTCTCCAGCATTCACAGTGGTGCTTCTCGTAGGCACTAGTGGTTGCGGTGTACTTCTATGTTTGTCTTGGGCACTTCGAGGTGACACTACGGTCATTGACAGAAAACCACTTTTGCCTGCTGGCTGGTCTGGGTTCTTGTCCAGCGCAGGCCTCTCTTTGTTTTCCTTCATAACGATGTTGCCAACCGTTGGTGAGCCCCCTGTTAGGGGAGGATTAGCTCCAAAGTTTCTGACGCTTACGCAGAGAATGGTCACATGCGCATTGTTCGCCGTTCCCTTCATGATCTACTCCACCGTCATTATTTTCCTTGCTGTACTGACTGAATTTAGGCAGGTTTCTTCAACAACACCTCTTCTCCATATGCTAGAATCTCGCGACTTGTCACCTCTTGTGCCAGCAATGTCATGTCTTCTAGTACTTGGTTTATCAGGAGCAATAATTGATCTCTTCCCGTTGTTATTTCAACATCTAGTGCTACTGTCAAGTCATAAATGGCAACTACTGGCAAAAAGCTTATCGTATGAAAGCCAAGAATCGGGTAGTCCTGTATTGGCAGTCTTTGCAGCAGGAAGCCTTTGTGGAATACTAGCATTTGCTTGTCCTTTAACAGTTTTGGTACGTCTAACAGCAAATGGTGCTCTTTTGTCTGGTCTATGTTGTGCAATTGAGTATTTATTAGCGGCATACAAACCAATCCATACACAACAACAAGAAATATCAGCCATTGCGTATAACAGATTACCAGTGACACCAAATATCGGAACCAAGAAAACCACAACAGAAAAGAAACCTTTATGGTTTTTACCAAAATCAAAGTCATGTCCTCGGTTAGGAGCGCATGTGTTGGGGAGGAAAGGACATAAAAAGCATGGCGAACGAGAAAGAGAATGGTTGCTTCTTGGTGAACCAGCATCACCTCAAGTTAGTTCTCCTAAGTCACCACTAAGTTCTTCTCCTACTCCAACAAGTCCAGAACTACTAGAGTCAGTTCTAGGATCTGACATAGAAGAAACAACTAACAGAGAAAGGACGGGGTCAGAATCTGACAGTTCTACAGATATTGATGCAATTGTTGATGAATACCGACAAAAAATTAAGgtgTCAACAGCTGGCCCTATGCAAGGAACATTAAAAGTGCCTACAGTATCTTCTTGGAGAAAAGCAATAGCTTGTACAATAAGTATATTAATGTTAAGCATCATAATGTCTGTGGCAGCCATTTTGGAAATGCGTGAATTATTTTTCTCTTGTTTAGCATtaattataataatcaaCTTCATCGTGTGGTGGATTCCAAAACGAGCTCCTTTAAAGATTTCTCCAACGATAGCTCCAGATGCGATAGCATTGACAACTCTCCTAGCTGGACCGATGCTTCTAGAAAGTTGGCCAGGTGTTTCCATGTGGATATTAGCAGGTCTTATAATATTTCTTCGCTTAAATTGCTGCTGTAGTTGTGCCGATGAATTAAACTCTTTTCCGATTGGTCGAACACGTGAAAGAAGAGTTCGAATTCGCGCTCCTCCACGAGGATCGATGGTGTCGCGACTTGTGGCCGGTCATCGAAACAGACCAGTTCCTTTGGATACGAAATGCGATTCACTGTTTAGAAATAATCTGAATGATCCACTATTTTTATTGGAGCctcctgaaataaaatgtaatactgATATTACATTGTCTATTCCAAAAGTTGAATTTGATACATCTGATCGTGATGAAAATAAAGCTaatcaaatttctatattaCCCTGTTTGAAACATGAAGAATCAAATACGAATAAAgataatcatattttaaatgaactAAGTATACACAGTACACAACTAGATGAGAAAGCAGAGCTTGATAATGatcaatatgatgacaaaatATGTAATGAAGACTGTTCTGACTCTAACGATGCTTTAATTAACTATGTTAAACCTAAAAAGAAGACCAGGCGGAAAAAGAATCAGTCTCCAAAAACTTTTGAATGCCCTGTTTGTCTAAAGACTTTTTCTGTACGATGTCGAATGCTTTATCATCTTCAAATTCACGGTGAAAAAACTGAGCAATGTCCATCATGTGATAGGAAATTTAAACACAAACGAGAAGTAATAGTTCATATGAAAACACACGGTGGATCCGAGAAATATCAATGCGAATATTGTGCATTGTGGTACAGTAGCAGTGCTAATCTATGCAAACACATCAGAATCAAACATCGCGCAGAAAGGGGACTACCACCGCCTGAACCGAGACAAAGAACACATTTATGTCACATGTGCCCCAAAGGATTTTACAGTGCGACATCGTTAAATTCGCATTTAATTACACATCGAGAAGAGCGAAATTTCGAATGTTCTATTTGCAAAAAAAcgtttatttcacaaaattatgttcAAAAACACATGGCTATACACAATTCCTCACAAGATTATGAATGTTCTATATGTTGTAAACGTTTTGGACAAgcaaaaaatttaaaagatcaTATGATAAGTCATTCAGgattaaaagaatttatttgcCAAGTTTGCAGCAGGGCTTTTGCaagaaaaaatgaattaaaaatgcaTATGAAAATTCACAGAAATGAAAAAGATATAGTTTGTCCACAATGTCCAATGAGATTTACGCAATTGGGGAATATGCGTAGGCACCTAGCAACACATCGCGATAAACAGGGGGAGAACCCACGTCCAAGGGATCATTTATGCCATGTGTGCTCCAAAGGATTCACCACAAAAGAATTACTTACGTCGCATATAAAAACACACAGTAGTACACGTGAATTCGCTTGCCATACCTGCGATGCACGTTTTCGCACAAAAGCTATTTTACAGGGACACGTGGAAACTCATAGCACAATCAAATCATACGTTTGCGAAGTTTGCAACAAAGGGTTTACTAAaGACAAATACTTAAAAGTGCATGTACGTTCCCATTCAAAAGAACGTAACTTCGATTGTTCAAAATGTAACAGAGGATTTGCTACTTCTTATTTACTTTCATTACATCAAAAACAGCATGAAGGTGTATTTCACGATTATTGTTTTTCATGTAACAAAGGCTATATGGTTCGATCCAGTTTCGATAAACATTTACAGTCAAAAGAACATCTGAGAATTGTTAAAGAAACCACCACAAACTAA
Protein Sequence: MTILCSRLSIQLPDSVAGRFAAGALILCPLVASDEGGVGAAFAVCLAAVTACAIVYCKEALKPLSPPYWRGRGAGALLRFLSIWLEILSLLSACAMCARVLSACLDSMTGGKARIMLLGRETFPQETWPDVLGVSIIILVTGMFMLGLENSPAFTVVLLVGTSGCGVLLCLSWALRGDTTVIDRKPLLPAGWSGFLSSAGLSLFSFITMLPTVGEPPVRGGLAPKFLTLTQRMVTCALFAVPFMIYSTVIIFLAVLTEFRQVSSTTPLLHMLESRDLSPLVPAMSCLLVLGLSGAIIDLFPLLFQHLVLLSSHKWQLLAKSLSYESQESGSPVLAVFAAGSLCGILAFACPLTVLVRLTANGALLSGLCCAIEYLLAAYKPIHTQQQEISAIAYNRLPVTPNIGTKKTTTEKKPLWFLPKSKSCPRLGAHVLGRKGHKKHGEREREWLLLGEPASPQVSSPKSPLSSSPTPTSPELLESVLGSDIEETTNRERTGSESDSSTDIDAIVDEYRQKIKVSTAGPMQGTLKVPTVSSWRKAIACTISILMLSIIMSVAAILEMRELFFSCLALIIIINFIVWWIPKRAPLKISPTIAPDAIALTTLLAGPMLLESWPGVSMWILAGLIIFLRLNCCCSCADELNSFPIGRTRERRVRIRAPPRGSMVSRLVAGHRNRPVPLDTKCDSLFRNNLNDPLFLLEPPEIKCNTDITLSIPKVEFDTSDRDENKANQISILPCLKHEESNTNKDNHILNELSIHSTQLDEKAELDNDQYDDKICNEDCSDSNDALINYVKPKKKTRRKKNQSPKTFECPVCLKTFSVRCRMLYHLQIHGEKTEQCPSCDRKFKHKREVIVHMKTHGGSEKYQCEYCALWYSSSANLCKHIRIKHRAERGLPPPEPRQRTHLCHMCPKGFYSATSLNSHLITHREERNFECSICKKTFISQNYVQKHMAIHNSSQDYECSICCKRFGQAKNLKDHMISHSGLKEFICQVCSRAFARKNELKMHMKIHRNEKDIVCPQCPMRFTQLGNMRRHLATHRDKQGENPRPRDHLCHVCSKGFTTKELLTSHIKTHSSTREFACHTCDARFRTKAILQGHVETHSTIKSYVCEVCNKGFTKDKYLKVHVRSHSKERNFDCSKCNRGFATSYLLSLHQKQHEGVFHDYCFSCNKGYMVRSSFDKHLQSKEHLRIVKETTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -