Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783215.1:2812537-2814849[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00022 0.014 16.8 0.6 2 23 243 265 243 265 0.95

2 10 3.6e-06 0.00023 22.4 0.4 5 23 267 285 266 285 0.95

3 10 1.3e-05 0.00084 20.7 1.7 1 23 291 314 291 314 0.97

4 10 0.0006 0.039 15.4 0.7 2 23 322 344 321 344 0.96

5 10 0.00079 0.051 15.1 0.4 1 23 366 388 366 388 0.98

6 10 0.0012 0.075 14.5 2.3 1 23 394 416 394 416 0.96

7 10 8.9e-06 0.00057 21.2 4.0 1 23 422 444 422 444 0.98

8 10 6.3e-06 0.00041 21.7 3.6 1 23 450 472 450 472 0.96

9 10 9.2e-05 0.0059 18.0 2.7 1 23 478 500 478 500 0.97

10 10 0.00029 0.019 16.4 0.5 1 23 506 529 506 529 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00022	0.014	16.8	0.6	2	23	243	265	243	265	0.95
2	10	3.6e-06	0.00023	22.4	0.4	5	23	267	285	266	285	0.95
3	10	1.3e-05	0.00084	20.7	1.7	1	23	291	314	291	314	0.97
4	10	0.0006	0.039	15.4	0.7	2	23	322	344	321	344	0.96
5	10	0.00079	0.051	15.1	0.4	1	23	366	388	366	388	0.98
6	10	0.0012	0.075	14.5	2.3	1	23	394	416	394	416	0.96
7	10	8.9e-06	0.00057	21.2	4.0	1	23	422	444	422	444	0.98
8	10	6.3e-06	0.00041	21.7	3.6	1	23	450	472	450	472	0.96
9	10	9.2e-05	0.0059	18.0	2.7	1	23	478	500	478	500	0.97
10	10	0.00029	0.019	16.4	0.5	1	23	506	529	506	529	0.97

Sequence Information

Coding Sequence: ATGTTAGTTTGCGTTGTTTCGGGGTGCTCCAACCGCAGtagtagaaatatttttaatcagaGTCTAACATTTCATAGATTTCCTGCAGATAATACTCTAAAAGAAGCATGGTTAGCAGCAATACATAAAAATGATTGGATTCCTTCAGATACAAGCTGTGTATGCTCTGAACATTTTGAAGAACACGACGTAAATATTACTTCTTTTTCTCAAACAACAATCAAAGATAATGCTGTGCCCACTATATTGTTCGACCCATTGATCTTACCAGAGGAATACTCAAGACATTATACTAACGTATCAAAAGAGGAAAAAATCTATGATAACACAGGAAATAACCAATTACTGCCAATGTCTGCTTTTCCAATACTAAACACAGAGAGTGTAGACAAAATATCTATAGAAAACACCGCAGATAACGAAGATGATATtgcaaatttaaaacataaactgAAAAAGTCTAATTACATAGTGGAAAGGcagaaaaaacaaattaaacttcTACAGCAAACTGTAAGACGCCATTCACAAAAGATAACTAAATTGgaaaATCCATTAGATGATAAATCATTGGATGGCAGTAGTTTGTCAGAATCTGCGGTAAATGATATAAACGACTTTAAAAACGTGTTTACAGAAAACGAAGAAGTTATAGAAACTAAATCAAAACGAGAAGTTACGACATTGCAAAATTATATTGGTAGAGGTTTGTTGGGGCATACGCGGCAGTGTTCCATTTGTAACGAAAAATTTCGTACTCTTAATGATCTTAAAGAACACAGAGCTTCTGTTCACAAAGAATGTGGGAAAGAATTCACGCGAAAAGAAAATCTTACACGGCATATGTtactacataaaaatattaaacgacaTAAATGTAAAGTTTGTGTGGAAGAATTCACAAGATCTGATCAGTTAAAAATTCATATGAATGTATTTCACGACACAAATGCTGAACGTCAGTATTGTACGGTCTGTAAGTACAACACAGcacaaaaagtaaatttaagagCACATATGCTGTCTAAACATTTAGTTAAAGTTGATAAAGATATGAAAGTAATTGGATTCAAAACCGCAGGAAAATCAGGAAGTTTTAAATGCTCTGTATGTGACAAAGTATTAAGTTCATATCAAGCATTAGGAACACATACGAAAATACACAGTGGAATTAAGAAATTTCTGTGTAAACATTGTGGCAGATATTTTAATACCAAACTGGGCTTAGATGTTCATGAAAGAACACATACTGGGGAAAGACCGTTCCCTTGCAAGCTATGTCCAAAGAAATTCAGTCAACGGACTTGTCTAACAACTCATATGTTGACCCATACAGGTGAAAGACCTCACCAGTGCAAGATATGTCCGAAACGATTCACCCAAAGCCAACACCTTCGTGCACATGTCCTCTTGCATACAGGAGAACGTAAACACATTTGCAATATTTGCAACAAGTCTTTTACTCTTCGAGATGGTTTACGTTATCACAAAATGACTCACACAGGAGAAACACCTTATGTTTGTCAAATATGCAAGAGAGGATTTTATATTCCTTATAAACTAAAAGTACACATGGCCAAAAATCATGGCATTACTCGGGAAGAGCTCATAAATAAAGAAGAATCTGCTAAAGAGAATGAAGAACATAATGTCAACCAAGTGCTTCATTAA
Protein Sequence: MLVCVVSGCSNRSSRNIFNQSLTFHRFPADNTLKEAWLAAIHKNDWIPSDTSCVCSEHFEEHDVNITSFSQTTIKDNAVPTILFDPLILPEEYSRHYTNVSKEEKIYDNTGNNQLLPMSAFPILNTESVDKISIENTADNEDDIANLKHKLKKSNYIVERQKKQIKLLQQTVRRHSQKITKLENPLDDKSLDGSSLSESAVNDINDFKNVFTENEEVIETKSKREVTTLQNYIGRGLLGHTRQCSICNEKFRTLNDLKEHRASVHKECGKEFTRKENLTRHMLLHKNIKRHKCKVCVEEFTRSDQLKIHMNVFHDTNAERQYCTVCKYNTAQKVNLRAHMLSKHLVKVDKDMKVIGFKTAGKSGSFKCSVCDKVLSSYQALGTHTKIHSGIKKFLCKHCGRYFNTKLGLDVHERTHTGERPFPCKLCPKKFSQRTCLTTHMLTHTGERPHQCKICPKRFTQSQHLRAHVLLHTGERKHICNICNKSFTLRDGLRYHKMTHTGETPYVCQICKRGFYIPYKLKVHMAKNHGITREELINKEESAKENEEHNVNQVLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01136837;
90% Identity: iTF_01136837;
80% Identity: iTF_01136837;