Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783220.1:7565001-7569719[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00033 0.022 16.2 1.2 1 23 179 202 179 202 0.94

2 15 3.6e-05 0.0023 19.3 1.0 1 23 208 230 208 230 0.98

3 15 0.00025 0.016 16.7 0.1 1 23 336 358 336 358 0.98

4 15 0.00088 0.057 14.9 0.2 1 23 364 387 364 387 0.98

5 15 0.0032 0.2 13.2 2.8 1 23 415 437 415 437 0.98

6 15 0.36 23 6.7 0.0 1 23 451 473 451 473 0.94

7 15 0.89 57 5.5 0.8 3 23 481 502 481 502 0.95

8 15 0.21 13 7.5 1.3 3 19 511 527 510 528 0.95

9 15 0.00082 0.053 15.0 3.9 1 23 537 559 537 559 0.97

10 15 0.22 14 7.4 0.2 3 23 566 586 564 586 0.96

11 15 3.5e-05 0.0023 19.3 0.5 1 23 594 616 594 616 0.98

12 15 0.009 0.58 11.8 0.2 3 23 624 644 622 644 0.97

13 15 0.00028 0.018 16.5 0.3 1 23 650 672 650 673 0.95

14 15 0.0099 0.64 11.6 0.2 1 23 686 708 686 708 0.96

15 15 0.0075 0.49 12.0 0.2 2 23 1082 1104 1081 1104 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00033	0.022	16.2	1.2	1	23	179	202	179	202	0.94
2	15	3.6e-05	0.0023	19.3	1.0	1	23	208	230	208	230	0.98
3	15	0.00025	0.016	16.7	0.1	1	23	336	358	336	358	0.98
4	15	0.00088	0.057	14.9	0.2	1	23	364	387	364	387	0.98
5	15	0.0032	0.2	13.2	2.8	1	23	415	437	415	437	0.98
6	15	0.36	23	6.7	0.0	1	23	451	473	451	473	0.94
7	15	0.89	57	5.5	0.8	3	23	481	502	481	502	0.95
8	15	0.21	13	7.5	1.3	3	19	511	527	510	528	0.95
9	15	0.00082	0.053	15.0	3.9	1	23	537	559	537	559	0.97
10	15	0.22	14	7.4	0.2	3	23	566	586	564	586	0.96
11	15	3.5e-05	0.0023	19.3	0.5	1	23	594	616	594	616	0.98
12	15	0.009	0.58	11.8	0.2	3	23	624	644	622	644	0.97
13	15	0.00028	0.018	16.5	0.3	1	23	650	672	650	673	0.95
14	15	0.0099	0.64	11.6	0.2	1	23	686	708	686	708	0.96
15	15	0.0075	0.49	12.0	0.2	2	23	1082	1104	1081	1104	0.94

Sequence Information

Coding Sequence: atgGATGATGAAGACGGCCCTTATTGTATGGAAGGCTGGGGTGGTACGGTTTCTGTTGAGGCAGAATCCTGGGAAGAAAACCCTGTTGCTTGCGAAGAAGTTGTTACCGAACAAGTAGTACATGAAGAAGTAATTTCGATGGATATGGCACATGCTGCACACCAAGAGCATCAGTATATGGTTGGTAATTGCGAAGAAATACCTCATAGCATGTCGCCGTCTTTAGACCAAATGGCagcagaaaatttaatttttatggcTCAAGATGGGAACAGTGTTATTTCTAGCTTAATGCAGATACCAGATATGAATGTTTCTACTAATAATTCTCATTTACAAAGCGATCATCATGGCTATGATCAACAGTACTTCGAGTGTCAAGTTACGGAAGAAGTTATCACTGATGACTGGACAGGAGCAGGAGGAGACAGAGTCGAGATTGTGGGTGCTGAACAAGTGAGTCCGTCGGAAGTTCTTGATGAAGAATGTGAAATACCATTACCAACAGATCAAGATTTGTATGCTACGAAACCGTATCCCTGTGATTTCTGTAGTCGCCGATTTCGCAAGAAACTTAATCTCACCAATCATATGGTGAATGCCCATCAAAATGATCGTCCATATAGCTGTAATCTATGTGGAAATCGATATATCCGGAAAAGTGATTTGATGAACCATTTAAAAAGTCACGCATATGTACCACAACCAGAGGAAGAAAACGATGAAGAAATGGATAACTTAGATGATCTAAGTCTTCTTGAAGAATCTGAATCAACATCTCACGTTAATTCATCGGTTAGAAAACGTAATAAACAAGGCACAAAACGTAAGAGGAGGGAACGAAAGTTGTTTGATGAAATATCTGAGTCAAAATACTCTACTCCAGCACCCCAATTTGACTATGACGAAGATATGAGATTGCTCACAGAAGCTGCGGAACAACATTACTCAAATAATATGTCTGTTTTAGAACCcagGTTTCCTGTTTCAGACCCTCGAAAACCGTTCGTTTGCCAACATTGCGGTGTAGGGTTTGCAAGAGAGAAGGCTTTGGCATCACATGCAAGAattCATGGGGGTGATTCACCATTTGAATGTGAAACTTGTGGAGAAATGTTTTGGGATTCAGCTTTATTAAGAGAACATACAAGAACAAAACATCAAATTCACTCTAGTAACTCCGAATATGAACCAGAAAATGATGAAACTGATGTTTCGGATTCTGACAGCAAATTTGGTGATTATTATTGCAATACATGTAGCATGTCATTCCATCGAGTAGAACTTCTGCGTAGACATGCACGTCTTCATGTTAAGAAGGAGCGTGGAGTGCTGGATGACACTGATGGGCACATCTGCAATGTATGTGGAGATTCATTCCCTGAAGCATTAGATTTATTGGCGCACGCTGAAGTTCATGCCCGATATCAAGCACATGGatgTGTGCTCTGCGGTGAAagattttctgatgaacaaagtTGTAGTGCCCATGTTCAAACTAGTCACGCAGAATCCTTATCAAGTAATTCTTGCCTTTTATGTGGAAAAGAATGTAAGGACCGGCGAGCTCTTTTAAAGCACTCTTGGGATCACACAAAAGGACGGGAGTACTCGTGTTCTAAATGTGCGAAAACGTTTCACAATAAAGCTAGATTAAAACGCCATATGGTTTCACATAGAAACAAATGTGTTGCTTGTGATATATGCGGAGATGAATTTCCCGACGGAAGATCTTTAATGAATCATCGTCATTCTCACAGTAGTATGTCTGGACGACAGTTTCCTTGTCGTGAGTGCGGTAAAACTTTTGGATCAAGAAGTTCTCAACAGATTCATCTTCGTATTCATACTGGTGAGAGACCGTATGGTTGTCGATTTTGTTGGAAAGCTTTTGCAGATGGAGGCACTTTACGAAAACATGAAAGAATACACACAGgtGAAAAACCTTACGCTTGTGCTGTGTGTCCGCGTGCATTTAATCAAAGAGTGGTCCTCCGGGAACATATTCGCTCTCATCATAGCGGCATGAATAAAAAAGGCACTAACTTACTACCATATTTCTGCGACGTATGTTCTGATATGTTTGAAACGTCTTCAGAACTGATACAACATTTAATTCAACACAGTGATATGAATACAGCTATGAAGCGACAACCACAGGTAGGACCTCGAAAGTATAAACGCCGCAGAAAATTAAAACCTCATGAGGTAGACCGTACTGATTATCTAGAAGATAAAAAGCCTATTAAACAGGATTCTGAGCACGAGAGCGATAATTATCCTGATCGGTCTCCTGAACGTGAAGTTGTACAAAAGCCATCACCATCTGTAAAGAAATCTAACAGAAAAGTAAAGAAACAAGTCTCAAAACCAAAATCAAATCCTTTGGACGATGGATTCGacgaaatatttcataattttgaaAGTGTTATTCAAGATTTTAACTCTATAGCTAATACAACGAAGACACCGAAggttaaaaagaaaaaagagaTTCCACCACAACCATCACGTCCTAAAATGATTCATACGTCTAAAACTAGGGTTGCTGTTGAAAATGCAGGGGATGGAAAgaaaaaaactaaaactttaATTACCAGAACAACACCAGCTGAAAtaaattctaatatttttaGAGGTGCGACTCCTGGTGAAAGGAATCGACCAAGGACAAAAAACGTTAGTTATCATAGTTTAGTCCCGGAAAAACATCCACTTGCAGTTTTTCCAGATGCTCATCTGCAAGACCACTTGGAAAATATGTTGGCAATGGCAACacctattaaaataaaagctgAACCCGGAGTTATACAATCGCCTGAAGCAGAAGGTGATAGTCCACTGAAAGATGTAAAAGGACTGGAGAAATTTAATAGTGATATTGTACACGATTtggaacaaatattaaaatctcCTATTAGGACCAAAATAAATTCCGAATCAAGTAATGGAACTGTGCGCAATGACCTTAATATAAAAACTCCAATAGACGAAAATTCAAGTAAACCAACAAGTAAAAAGAAGCcaccaattaaaaataaaatagtagtaCCAGtgctaaataaaattgaaacgcGAAATAGAGGTATACCAAAGAGAAGTTTTAAACCTGTAAGACCAACTAAAAGATCAGTTGTTAGCAATGACAAAAATGTGTTAATTAAAAGAGAGTGTATAACATCTGAAGTAACAATTAAAGAAGAAGTCATGGACATAGAAGTTGACGAAGCTGGCGGTGTTCTTAAATGCCCAATGTGCCCTTCCAAATCTTTTTCAAATTATAACGAATTAAGAGCGCACGGAGCATCTCATTTCTGA
Protein Sequence: MDDEDGPYCMEGWGGTVSVEAESWEENPVACEEVVTEQVVHEEVISMDMAHAAHQEHQYMVGNCEEIPHSMSPSLDQMAAENLIFMAQDGNSVISSLMQIPDMNVSTNNSHLQSDHHGYDQQYFECQVTEEVITDDWTGAGGDRVEIVGAEQVSPSEVLDEECEIPLPTDQDLYATKPYPCDFCSRRFRKKLNLTNHMVNAHQNDRPYSCNLCGNRYIRKSDLMNHLKSHAYVPQPEEENDEEMDNLDDLSLLEESESTSHVNSSVRKRNKQGTKRKRRERKLFDEISESKYSTPAPQFDYDEDMRLLTEAAEQHYSNNMSVLEPRFPVSDPRKPFVCQHCGVGFAREKALASHARIHGGDSPFECETCGEMFWDSALLREHTRTKHQIHSSNSEYEPENDETDVSDSDSKFGDYYCNTCSMSFHRVELLRRHARLHVKKERGVLDDTDGHICNVCGDSFPEALDLLAHAEVHARYQAHGCVLCGERFSDEQSCSAHVQTSHAESLSSNSCLLCGKECKDRRALLKHSWDHTKGREYSCSKCAKTFHNKARLKRHMVSHRNKCVACDICGDEFPDGRSLMNHRHSHSSMSGRQFPCRECGKTFGSRSSQQIHLRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGMNKKGTNLLPYFCDVCSDMFETSSELIQHLIQHSDMNTAMKRQPQVGPRKYKRRRKLKPHEVDRTDYLEDKKPIKQDSEHESDNYPDRSPEREVVQKPSPSVKKSNRKVKKQVSKPKSNPLDDGFDEIFHNFESVIQDFNSIANTTKTPKVKKKKEIPPQPSRPKMIHTSKTRVAVENAGDGKKKTKTLITRTTPAEINSNIFRGATPGERNRPRTKNVSYHSLVPEKHPLAVFPDAHLQDHLENMLAMATPIKIKAEPGVIQSPEAEGDSPLKDVKGLEKFNSDIVHDLEQILKSPIRTKINSESSNGTVRNDLNIKTPIDENSSKPTSKKKPPIKNKIVVPVLNKIETRNRGIPKRSFKPVRPTKRSVVSNDKNVLIKRECITSEVTIKEEVMDIEVDEAGGVLKCPMCPSKSFSNYNELRAHGASHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -