Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783206.1:21101943-21107692[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.6e-05 0.001 20.4 2.4 1 23 186 208 186 208 0.98

2 13 0.11 6.9 8.4 1.4 1 23 214 237 214 237 0.94

3 13 0.00038 0.025 16.1 0.3 1 23 243 265 243 265 0.95

4 13 8.9e-05 0.0058 18.1 0.1 1 23 271 293 271 293 0.98

5 13 0.001 0.066 14.7 0.5 1 21 299 319 299 320 0.92

6 13 0.065 4.2 9.0 2.9 3 23 463 483 461 484 0.94

7 13 0.00085 0.055 15.0 0.8 1 23 490 512 490 512 0.97

8 13 0.00042 0.027 15.9 0.5 1 23 518 541 518 541 0.95

9 13 8.4e-05 0.0054 18.1 0.3 1 23 547 569 547 569 0.97

10 13 0.00048 0.031 15.7 0.0 1 23 575 597 575 597 0.98

11 13 0.0071 0.46 12.1 0.7 3 23 605 625 603 625 0.93

12 13 3.7e-05 0.0024 19.3 0.9 1 23 631 653 631 653 0.99

13 13 0.00017 0.011 17.2 1.8 1 23 659 682 659 682 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.6e-05	0.001	20.4	2.4	1	23	186	208	186	208	0.98
2	13	0.11	6.9	8.4	1.4	1	23	214	237	214	237	0.94
3	13	0.00038	0.025	16.1	0.3	1	23	243	265	243	265	0.95
4	13	8.9e-05	0.0058	18.1	0.1	1	23	271	293	271	293	0.98
5	13	0.001	0.066	14.7	0.5	1	21	299	319	299	320	0.92
6	13	0.065	4.2	9.0	2.9	3	23	463	483	461	484	0.94
7	13	0.00085	0.055	15.0	0.8	1	23	490	512	490	512	0.97
8	13	0.00042	0.027	15.9	0.5	1	23	518	541	518	541	0.95
9	13	8.4e-05	0.0054	18.1	0.3	1	23	547	569	547	569	0.97
10	13	0.00048	0.031	15.7	0.0	1	23	575	597	575	597	0.98
11	13	0.0071	0.46	12.1	0.7	3	23	605	625	603	625	0.93
12	13	3.7e-05	0.0024	19.3	0.9	1	23	631	653	631	653	0.99
13	13	0.00017	0.011	17.2	1.8	1	23	659	682	659	682	0.97

Sequence Information

Coding Sequence: ATGGCTGAAAAAACAATACTCCCAGCTACGTACTGTTGTAACCCATTTAACAAAGAAAACCACCAGAGTATCACAAAGGGCCTAAGCCCTGTAACAAAATGGATGTGcaatttattacacaaaatcGAAAAGAGCATGAAAATTTGTTACATCTGCAGAAAACAATTATatcttgaaaaagaaaaaggaattgAATCAGAACACAATTTAGTTCCAAAGTTTTGTAatgaaatattatcaaataaaaactGTGGACTCCAAGAACCGAACGCAACAACCACAAAACTAGAATACGATGTCCAAAAAATCTGCAGAATTTGTCTAAAAGATGGTTTAAACATGATGTCTATAAATGATGGCTATTTGCGCGACTTATTTACCAAATTCACAAAGTTGGAGgtCTCAAAAGATGATAATTTGCCTAATAAGCTATGCACATCCTGTATAGAAAAGCTAAATAATAGTCAAAATTTTCATGAACTTTGCATTCAAAGCGATTATATTCTAAGACAGCAAAGGAGTCATATTACCAACAAGCATTCCGACGTAAAACCATTTACATGTAAATTTTGCCCAAAAAAATTCAAGCAAACATCTGCATTAAGGGAACATCTTCTTCGGCATTCTGgagtaaaaaaatttacatgCAGTCTTTGTAGACATACCACGTTAACAAACGGTGATCTTAAAAAGCATATGGCAGCGTCACACACAGCTgtaaaaaaatttctttgccaAACTTGCCCAAAAGGTTTCAATAAGGCTACAGATTTATTAGTGCATACTAGAATCCACACTGGAGAGAGGCCCTATAATTGTGAGGTGTGCCCCATGAGTTTTAGGGCGGCTAGTGTTTTAAAGAACCATATGATAACACACTCTGGACAGAAATCTCATCATTGTGGAACTTGTGGGAAAGCTTTTGCACGAAAATATAGATTAGCAGCTCACGAAAAAatAATAAAACTTGAAAAGGATGACGAAacagaaaataCACAATCCCCGAATGTTCAAGATGcatctataaataattttttggaaGTGACATACACAGAAAGAAATGAAACATTAGAtagtataatagaaaatgagGATAACACAatcaaagaaaaagaaaatgtccAGGAAAGTGTAACAAATATAGAAAACAATGAAATACCcgataattcaattaaaaatgattataatatTAGCAAGAAAAAAGGAAGAGTCAAAAAGAATGTAAATTATTCTGAAGGAAATGAAGGACTtgataattcaataaaaaatgaaaacaaaaccaAGGAAAATGTAGAAGAAAATCgtattaaagaaaagaaaagaaatgctagaagaaagaaaaggaaagaaaaagcTGCAGCAAAGGAAAGATCTTTGcCTACATTTTGTGAAATTTGTAACAAGAGGTTTATATGCTTAAGAGCTTTAAAAGCACATATAATATATCATCATACGGAGCCTAGAAGCTATGTTTGTGTAAAATGCGGAAAATGTTTTGCGAAAAAAGCTATTCTAACTGTCCATGAAAAAATCCACACTGGAATCAAAAGTTTCGTGTGCGATTCATGCGGAGAATCATTTAGTACGAAGAGTATTTTAAAGACGCATGTAGCTCGTAAACACAGTGATGAAAGACCTTTTGCTTGTGATATATGTCcacaaagatttaaaatatcatcCTCGTTAAAAGAACATTTACTAAGACATTCTGGAATCAAGAAATATATCTGCACCACCTGTGGATTAGGTGCTGCAACAAAAGGTGAATTAAGAAAGCATATGGCTTCACATAGTGACGAAAGACCATTTCTTTGTGCAGCGTGTCCAAAAAGATACAAAACATCTCGAGAATTATCAACGCATAACCGAGTTCACACTGGAGAGAGACCTTATAAATGTGATCTTTGTCCAAAAGGTTTTCGATTGAGTTCTGTTTTGAAAAATCATAGGATGACTCATACTGGAGAGAAGCCACATGTTTGTAGTCTTTGTAACAAGGCTTTTACGCAAAGAATTGCGTACCGAACGCATTTGAAACGTGCACATAAATAA
Protein Sequence: MAEKTILPATYCCNPFNKENHQSITKGLSPVTKWMCNLLHKIEKSMKICYICRKQLYLEKEKGIESEHNLVPKFCNEILSNKNCGLQEPNATTTKLEYDVQKICRICLKDGLNMMSINDGYLRDLFTKFTKLEVSKDDNLPNKLCTSCIEKLNNSQNFHELCIQSDYILRQQRSHITNKHSDVKPFTCKFCPKKFKQTSALREHLLRHSGVKKFTCSLCRHTTLTNGDLKKHMAASHTAVKKFLCQTCPKGFNKATDLLVHTRIHTGERPYNCEVCPMSFRAASVLKNHMITHSGQKSHHCGTCGKAFARKYRLAAHEKIIKLEKDDETENTQSPNVQDASINNFLEVTYTERNETLDSIIENEDNTIKEKENVQESVTNIENNEIPDNSIKNDYNISKKKGRVKKNVNYSEGNEGLDNSIKNENKTKENVEENRIKEKKRNARRKKRKEKAAAKERSLPTFCEICNKRFICLRALKAHIIYHHTEPRSYVCVKCGKCFAKKAILTVHEKIHTGIKSFVCDSCGESFSTKSILKTHVARKHSDERPFACDICPQRFKISSSLKEHLLRHSGIKKYICTTCGLGAATKGELRKHMASHSDERPFLCAACPKRYKTSRELSTHNRVHTGERPYKCDLCPKGFRLSSVLKNHRMTHTGEKPHVCSLCNKAFTQRIAYRTHLKRAHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -