Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783210.1:8828335-8830516[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0061 0.39 12.3 1.1 1 23 193 216 193 216 0.96

2 12 1.2e-06 7.8e-05 23.9 0.3 1 23 225 247 225 247 0.98

3 12 0.0002 0.013 16.9 3.7 3 23 256 276 255 276 0.98

4 12 3.8e-06 0.00025 22.3 1.2 1 23 282 304 282 304 0.98

5 12 8.1e-05 0.0052 18.2 0.1 1 23 310 332 310 332 0.98

6 12 0.00069 0.044 15.3 2.0 1 23 338 361 338 361 0.96

7 12 0.00012 0.0078 17.6 1.3 1 23 367 391 367 391 0.98

8 12 2.3e-05 0.0015 19.9 0.6 1 23 397 419 397 419 0.99

9 12 7.1e-05 0.0046 18.4 0.8 2 23 426 447 425 447 0.98

10 12 0.05 3.2 9.4 2.5 1 23 453 476 453 476 0.98

11 12 0.00079 0.051 15.1 3.7 1 23 481 503 481 503 0.97

12 12 4.5e-06 0.00029 22.1 2.4 1 23 509 531 509 531 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0061	0.39	12.3	1.1	1	23	193	216	193	216	0.96
2	12	1.2e-06	7.8e-05	23.9	0.3	1	23	225	247	225	247	0.98
3	12	0.0002	0.013	16.9	3.7	3	23	256	276	255	276	0.98
4	12	3.8e-06	0.00025	22.3	1.2	1	23	282	304	282	304	0.98
5	12	8.1e-05	0.0052	18.2	0.1	1	23	310	332	310	332	0.98
6	12	0.00069	0.044	15.3	2.0	1	23	338	361	338	361	0.96
7	12	0.00012	0.0078	17.6	1.3	1	23	367	391	367	391	0.98
8	12	2.3e-05	0.0015	19.9	0.6	1	23	397	419	397	419	0.99
9	12	7.1e-05	0.0046	18.4	0.8	2	23	426	447	425	447	0.98
10	12	0.05	3.2	9.4	2.5	1	23	453	476	453	476	0.98
11	12	0.00079	0.051	15.1	3.7	1	23	481	503	481	503	0.97
12	12	4.5e-06	0.00029	22.1	2.4	1	23	509	531	509	531	0.98

Sequence Information

Coding Sequence: atGGATATTGAAACAATGATGGATAATTTAGTTAATGAAGACATACAAACTACACCTGTGCTTCAAATTGATAAGATATGTCGGGCGTGTTTGTCTTGTATGGGAGATTTGCGCCCTATATTTCATACAGGAGAAATTGTAGGAAGATCACCACAGATGAAGGAAATGTTAATGATGTGTGCTTTTGTTGAGGTTTCTGAAAATGATGGATTACCAGCCCTCATTTGTGTACAATGTGTTCAACATGCAAATATTGCCTATAACTTTAAGCAACAATGTGAGCGATCAGATTCCACCTTACGACAATACATAGGATTACCACCTCTGACTCCATCCAGAGTTAAAGTTAAGCTGGAAAAAATAAAACTAGAGGATAACGATTCAAGTTCAGATGGATTTAATATGGATGACAACATGCTTGAACCTAAAGTGGAAATAAATGAATCTAATAACTCAGGTAAACGAAAAGTGAAGAATATTAAAGCAACTGTGAAGAGAAAAAGAAGGGTTAATAAAAAGATATCAGATGACGAAGATGATGAAGAGTTCGATGATGATGAAACGGAACAACCCTTATTCCCTTGTAATGATTGTATACAATGTTTTACTGAAATGAGAGATTTGAAGCGACATGTTCGGGCTGAACATGCCAAGTGTAAAGATAATGGTAATTTTATATGTCAAGATTGTAATCAGGTATTTTCCCAAGCTCAAACATTAGCCAGGCATATGAAAATTCACCAAGCCAATCAAAAAAATAAGCTATGTACTTTCtgtggaaaatgttttttgagGTCCGATGATTTGAAAAGGCATACAAGGATTCACACGGGCGAGAGGCCGTACTCTTGTGACCAGTGCCCCAAACGTTATAAACAGAGCTCCGAGTTAAAAGAACATGTAAAATCTCATTCAGCTAATAAGCATTACATGTGCACGGAGTGTGGAAAAGGACTGGCTACAAGAAACGGACTTTACGTTCATATGAAAGTACATCGCGGAGAGAAAAATCATCAGTGTCAGATCTGTGGGAATAAATATGTTACTACAGgtgAACTTACATCACATATGAATCACATACATTCACATGAAAAACCATATACatgtaaatatgaaaattgtaCGAGAGCTTTTGTTACAAAACTATCCTTGGAAACTCATTTACGAACTCATACTGGTGAAAAACCGTTTAAGTGTCCGGTATGTGAGAAAGCCCTCGCCACGGCATCTAGCCTCCACGAGCACAAACGAACTCATACTGGTGAAAAACCAAAACAGTGTACTGTTTGTGATCGCCGATTAGGAAATTCACAAGCATTGAAAAAACACATGAGAATCCACACTGGAGAACGCCCCTACCAATGCAAAATATGTCTAGAAAAGTTTATTTGTGGTAGCACCTTAAATACGCAcatgaaaataaaacatttggAAAAACAACACGAATGTACAATATGTCACAAGATGTTTGCATTAGGAACAAAGTTGAGACAACATATGAGACTGCATTCGGATGAAAAACCGTACAGCTGTCATGTTTGTGGATTAAGTTTTAATCAAAGTGCTAAATTGTATCAACATATGAAATCACATGAGTCTCCACCAATGATACCGAAAGCGTCGTCGTTGCAGAGGATGATGCCTCAACTACCTATACCTCAGTTAGCTATGCCACAGTTGCCAATGCCTCATTACCTCTAA
Protein Sequence: MDIETMMDNLVNEDIQTTPVLQIDKICRACLSCMGDLRPIFHTGEIVGRSPQMKEMLMMCAFVEVSENDGLPALICVQCVQHANIAYNFKQQCERSDSTLRQYIGLPPLTPSRVKVKLEKIKLEDNDSSSDGFNMDDNMLEPKVEINESNNSGKRKVKNIKATVKRKRRVNKKISDDEDDEEFDDDETEQPLFPCNDCIQCFTEMRDLKRHVRAEHAKCKDNGNFICQDCNQVFSQAQTLARHMKIHQANQKNKLCTFCGKCFLRSDDLKRHTRIHTGERPYSCDQCPKRYKQSSELKEHVKSHSANKHYMCTECGKGLATRNGLYVHMKVHRGEKNHQCQICGNKYVTTGELTSHMNHIHSHEKPYTCKYENCTRAFVTKLSLETHLRTHTGEKPFKCPVCEKALATASSLHEHKRTHTGEKPKQCTVCDRRLGNSQALKKHMRIHTGERPYQCKICLEKFICGSTLNTHMKIKHLEKQHECTICHKMFALGTKLRQHMRLHSDEKPYSCHVCGLSFNQSAKLYQHMKSHESPPMIPKASSLQRMMPQLPIPQLAMPQLPMPHYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -