Basic Information

Insect: Panorpa germanica
Gene Symbol: -
Assembly: GCA_963678705.1
Location: OY783206.1:23939853-23951966[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.059 3.8 9.2 0.1 2 23 207 228 206 228 0.96

2 29 0.014 0.88 11.2 0.1 3 23 236 256 235 256 0.97

3 29 1.3e-06 8.5e-05 23.8 0.4 1 23 262 284 262 284 0.97

4 29 1.2e-05 0.00074 20.8 1.4 1 23 290 313 290 313 0.92

5 29 3.8e-05 0.0024 19.2 4.4 1 23 319 342 319 342 0.95

6 29 0.0017 0.11 14.0 1.5 1 23 348 370 348 370 0.96

7 29 0.0019 0.12 13.9 1.6 1 23 376 398 376 398 0.93

8 29 0.024 1.5 10.4 1.2 1 23 404 426 404 426 0.98

9 29 0.03 1.9 10.1 0.2 1 13 432 444 432 446 0.91

10 29 0.13 8.1 8.1 0.2 2 23 563 584 562 584 0.95

11 29 0.0005 0.032 15.7 0.2 3 23 592 612 591 612 0.97

12 29 5.2e-06 0.00034 21.9 0.4 1 23 618 640 618 640 0.96

13 29 8e-06 0.00052 21.3 0.8 1 23 646 669 646 669 0.93

14 29 1.3e-05 0.00085 20.7 2.6 1 23 675 697 675 697 0.98

15 29 0.0031 0.2 13.2 1.3 1 23 703 725 703 725 0.96

16 29 0.0022 0.14 13.7 2.9 1 23 731 753 731 753 0.95

17 29 0.024 1.5 10.4 1.2 1 23 759 781 759 781 0.98

18 29 0.025 1.6 10.3 0.2 1 13 787 799 787 801 0.90

19 29 0.0055 0.36 12.4 0.2 2 23 982 1003 981 1003 0.95

20 29 0.00058 0.038 15.5 0.4 3 23 1011 1031 1010 1031 0.97

21 29 0.00011 0.0068 17.8 0.6 1 23 1037 1059 1037 1059 0.97

22 29 3.1e-06 0.0002 22.6 0.2 1 23 1065 1088 1065 1088 0.93

23 29 2.5e-05 0.0016 19.8 3.9 1 23 1094 1116 1094 1116 0.98

24 29 0.0011 0.069 14.7 1.6 1 23 1122 1144 1122 1144 0.96

25 29 9.7e-05 0.0063 17.9 1.4 1 23 1150 1172 1150 1172 0.96

26 29 0.015 0.97 11.0 1.8 1 23 1178 1200 1178 1200 0.98

27 29 1e-06 6.5e-05 24.2 1.0 1 23 1206 1228 1206 1228 0.98

28 29 4.4e-05 0.0028 19.0 1.4 1 23 1234 1256 1234 1256 0.98

29 29 2.8e-05 0.0018 19.7 2.3 1 23 1262 1284 1262 1284 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.059	3.8	9.2	0.1	2	23	207	228	206	228	0.96
2	29	0.014	0.88	11.2	0.1	3	23	236	256	235	256	0.97
3	29	1.3e-06	8.5e-05	23.8	0.4	1	23	262	284	262	284	0.97
4	29	1.2e-05	0.00074	20.8	1.4	1	23	290	313	290	313	0.92
5	29	3.8e-05	0.0024	19.2	4.4	1	23	319	342	319	342	0.95
6	29	0.0017	0.11	14.0	1.5	1	23	348	370	348	370	0.96
7	29	0.0019	0.12	13.9	1.6	1	23	376	398	376	398	0.93
8	29	0.024	1.5	10.4	1.2	1	23	404	426	404	426	0.98
9	29	0.03	1.9	10.1	0.2	1	13	432	444	432	446	0.91
10	29	0.13	8.1	8.1	0.2	2	23	563	584	562	584	0.95
11	29	0.0005	0.032	15.7	0.2	3	23	592	612	591	612	0.97
12	29	5.2e-06	0.00034	21.9	0.4	1	23	618	640	618	640	0.96
13	29	8e-06	0.00052	21.3	0.8	1	23	646	669	646	669	0.93
14	29	1.3e-05	0.00085	20.7	2.6	1	23	675	697	675	697	0.98
15	29	0.0031	0.2	13.2	1.3	1	23	703	725	703	725	0.96
16	29	0.0022	0.14	13.7	2.9	1	23	731	753	731	753	0.95
17	29	0.024	1.5	10.4	1.2	1	23	759	781	759	781	0.98
18	29	0.025	1.6	10.3	0.2	1	13	787	799	787	801	0.90
19	29	0.0055	0.36	12.4	0.2	2	23	982	1003	981	1003	0.95
20	29	0.00058	0.038	15.5	0.4	3	23	1011	1031	1010	1031	0.97
21	29	0.00011	0.0068	17.8	0.6	1	23	1037	1059	1037	1059	0.97
22	29	3.1e-06	0.0002	22.6	0.2	1	23	1065	1088	1065	1088	0.93
23	29	2.5e-05	0.0016	19.8	3.9	1	23	1094	1116	1094	1116	0.98
24	29	0.0011	0.069	14.7	1.6	1	23	1122	1144	1122	1144	0.96
25	29	9.7e-05	0.0063	17.9	1.4	1	23	1150	1172	1150	1172	0.96
26	29	0.015	0.97	11.0	1.8	1	23	1178	1200	1178	1200	0.98
27	29	1e-06	6.5e-05	24.2	1.0	1	23	1206	1228	1206	1228	0.98
28	29	4.4e-05	0.0028	19.0	1.4	1	23	1234	1256	1234	1256	0.98
29	29	2.8e-05	0.0018	19.7	2.3	1	23	1262	1284	1262	1284	0.98

Sequence Information

Coding Sequence: atgacaagTAATAATTCAAAACTACAGTACGACATATATAAAACATGTCGAGCTTGTTTATTAAATGCTGAGACTGAaatgaaatcaatttttaattgtaatttaaaagatttatacacagtgttaacaaatttggagattAAAGAAAATGATGGATTACCCtctaatttatgtataaattgcGTGGAACGCCTcgatttatgtttaatatttcgAAATCAGTGTATAAAAAGTGATGGTGTGTTAAAACAAAGCaagATAATAAAACAAGAAGCAGCAGATGACATTACAGaaaGTAGAAATGAAGATTTTGAATTTGTAAATATCTTAAAAGCAGAATCAGAACAAACAGATGATAATATTGACATAAGCTTTGATGAGAAAATCATAAACAatcttaaaattgaaattaatgattctaacatatcagaagcacaaaaagaaaaaaaactattaaagcGTAAATCAAGTTTACCCAAAGTAAAAAGTCGCATCAAAATAAGTAAAGGAGTTGCAGAAAAAATTTCACAGaagaatataaaacatattaggAAAACTAAAAGtaaagAACGACCTGCAGTTAACGGGGAACCAAATTATGATTATAATCTTACTCTATCATGTCCGGAATGTCGAGAAATATTTATGGAACCAAGTCAACTAGATCTACATTTTAGTACACATACTGAACCGAAGACAAAAATATGTGAACTCTGTAATGGAGTATACGCAAATGCGATGTCTTTGAAGAAACATATGGTTAGACATAAAGGTCTTCGAAATCATATGTGTCCAGAATGCGGTAAAGGTTTTGCTGATAAATCTTATCTGCGAAGCCATCTATTGATTCATAGGGGAATTAGAAGTTTTATTTGTGAGGGATGTGGAAAGTCATTCCAttcaaattctaatttaaaaACACACGTAGCTCAGAAACACAGCGACGAAAAACCACATACCTGTAAATTATGTccaaagaaatttaaaacaaaatcagACTTAAAAAGTCATCTCTTATATACACATACAGcagtaaagaaatatttatgtaatttatgtcCACACGCATCAAAAACAAATAAGGATCTAAAAAGACATCTCGCAACTCATAGCGATGAAAAACCTTACTTATGCACAGTGTGTAGTAAGAAATTTCGAACTTCAAGAGAACTCTCGCAACACAATTCGATTCACACTGGAGAAAGACCTCATCAGTGCGATCTCTGTCCAATGGCGTTTCGACTTAAGATTATTCTCCAGAATCACAGAAGAACCCATACGGGGGAAAAGCCTCATGTTTGTGATATCTGCGGGAAGGCGTTTACACAGAAGattaaacGTGAAGATTTGGATACAGAGAAGATAGAAAAACCTACAGGTGTACAACCAAATGAAATTGATGggcaaaaatttgaatttatagaCGTGGTTAAAGCGGAAGCAGAAAGTATTAGCACATGTGTTGATGAGAAACTAatgaatcatttaaaaattgagATAAAAGAACCAATTACCACTAAAATTCATAAAGCAaacagaattagaaaaaataaaataaaagtttgcaAAAAAAGTACaccaaaaagtaaaagaaatagtCAAGAATCTTTAAAACATCAAAATAAAAGAATTGAATCTTCAATTAAGGAAGAATCAAAACATTTAACAGACTTCAATTTGTCTTTATCATGTCCAGAATGTCATGATAATTTTATAGAAGCAAGTCAGTTAGAAGAACACTTTGGTACACATCTAGGAGATAagAAAGAGATTTGTAATATATGCAATGGTGTTTATGCAAATGCAAAATCTTTGAAGAAGCATATGATAAGACATAAAGGACTAAGGAATCACATGTGCCCCGAATGCGGAAAAGGTTTCGCAGATAAATCTTATCTGCGATCGCATGAGTTAATACACAGAGGGATTCGCAGTTATATATGTGAAGGCTGTGGAAAATCATTCCAttcaaattctaatttaaagATACATGTGGCTCAAAGGCATAGTGATGCAAAACCATACAACTGTAATCTATgtgaaaagaaatttaaaacaacttcCGATTTAAAAAGTCATCAACTAACGCACAcaggaataaaaaaatatttatgtaatttatgtcCACACAAAGCAAGAACAAATGGGGATCTTAAAAGACACCTAAAAATCCATAGTGATGAGAAGCCCCATGAATGTACTGTTTGTAATAAGAGATTTAGAACGACCACAGAATTATCGCAACACAATTCTATACACACTGGAGAAAGACCTCATCAGTGCGATCTCTGTCCCATGGCGTTTCGGCTGAAGATTATTCTCCAGAATCATAGAAGAACTCATACGGGGGAAAAGCCTCATGTTTGTGATATCTGTGGAAAAGCGTTTACCCAGAAGGTAAAAGAAAATGATGGACTGCCTTcaaatttatgtattaattgTGTAGAACGACttgatttgtattttaattttcgtAATCAGTGCATAAAAAATGatgatatattaaaaaagagTGAGaTAATCAAACGGGAAGACTCAGATTTCTTTACAGATAAAGTTAGAAATCTTACATATATTGAAACTGAATCGGTAGGtcagaattttgaatttatagaCGTAAAAGAAGAATCATCTCAATCAGTTGATAGCCCCAGCACCAGCGTAGacgaaaaattaataaaccatttaaaaattgaaatcaaaGAATCAAATATCTCAGAAGTGCAATTACAAAACGCTGCTAGAAAACAAAGAaacattagaaaaataaaaccttCAAGAAAAGTTAAAGAAAGAGTTGAAAGAAGAATTATAAGGAAAAGTAGAAAAGTTATCCAAAAGGCTGTAAGGCATCAAAAAGAAAGGAAACATATCGAATACTCTAAGAATGAATCTTCAGTTCAAGAAGACGAAACATCTGATAGAGATTACAATTTGTCCTTATCTTGTCCAGAATGTCGAGAAAGTTTTACGGAACCAAGTCTATTAGATGAGCATTTCAGTAAACATTTCGAAGATCAGaaaGAAATTTGTGAAATTTGCAATGGCGTTTACAAGAATCTAAAATCCCTTAAGAAACATATGATTCGTCATAAAGGTTTAAAAAATCACAAGTGTCTCGAATGTGGGAAAGGTTTTGCTGATAAATGGTATCTACGATCGCATGAGTTAATACATAGGGGAATTCGGAGCTACGTTTGCGATGGTTGTGGAAAGGCATTTCGTTCAAATTCAAGTTTAAAGATACATGTTGCGCAAAGACATAGTGATGAGAAACCATATAGTTGTAAGCTCTGCGAGAAACGTTTCAAGACAACgtcaaaattaaaaaaccatCAGTTAACACATACTGGAATAAAGAATTATCTATGTAGTCTGTGTCCCCATACAGCAAGAACTAATGGTGATCTTAAAAGGCATTTAAAAACGCATAGCGATATTAAACCATATGAATGTACcgtatgtaataaaaaatttagaacTTCTACTGAATTATCGCAACATAATTCAATTCACACTGGAGAAAGACCTCATCAGTGCGATCTCTGCCCTATGTCGTTTCGACTTAAGATTATTCTCCAGAATCACAGGAGAACTCATACGGGGGAAAAGCCTCATGTTTGTGATATCTGCGGAAAAGCGTTTACAACAAAAGTGGTTCTTACTACACATATGAAAACACATAGCAgtGAAAGGCCTCATCAATGTGATATTTGTCCAATGGCATTTAGACTTAAAGTTAGTTTACAAAATCATAGAAGAACCCATACAGGCGAAAAACCACATGTTTGTGAAATTTGTGGAAAGGCATGCACCACAAAAGTTGTTCTGACGAGTCATATGAAAACACATAGCAATGTTTAG
Protein Sequence: MTSNNSKLQYDIYKTCRACLLNAETEMKSIFNCNLKDLYTVLTNLEIKENDGLPSNLCINCVERLDLCLIFRNQCIKSDGVLKQSKIIKQEAADDITESRNEDFEFVNILKAESEQTDDNIDISFDEKIINNLKIEINDSNISEAQKEKKLLKRKSSLPKVKSRIKISKGVAEKISQKNIKHIRKTKSKERPAVNGEPNYDYNLTLSCPECREIFMEPSQLDLHFSTHTEPKTKICELCNGVYANAMSLKKHMVRHKGLRNHMCPECGKGFADKSYLRSHLLIHRGIRSFICEGCGKSFHSNSNLKTHVAQKHSDEKPHTCKLCPKKFKTKSDLKSHLLYTHTAVKKYLCNLCPHASKTNKDLKRHLATHSDEKPYLCTVCSKKFRTSRELSQHNSIHTGERPHQCDLCPMAFRLKIILQNHRRTHTGEKPHVCDICGKAFTQKIKREDLDTEKIEKPTGVQPNEIDGQKFEFIDVVKAEAESISTCVDEKLMNHLKIEIKEPITTKIHKANRIRKNKIKVCKKSTPKSKRNSQESLKHQNKRIESSIKEESKHLTDFNLSLSCPECHDNFIEASQLEEHFGTHLGDKKEICNICNGVYANAKSLKKHMIRHKGLRNHMCPECGKGFADKSYLRSHELIHRGIRSYICEGCGKSFHSNSNLKIHVAQRHSDAKPYNCNLCEKKFKTTSDLKSHQLTHTGIKKYLCNLCPHKARTNGDLKRHLKIHSDEKPHECTVCNKRFRTTTELSQHNSIHTGERPHQCDLCPMAFRLKIILQNHRRTHTGEKPHVCDICGKAFTQKVKENDGLPSNLCINCVERLDLYFNFRNQCIKNDDILKKSEIIKREDSDFFTDKVRNLTYIETESVGQNFEFIDVKEESSQSVDSPSTSVDEKLINHLKIEIKESNISEVQLQNAARKQRNIRKIKPSRKVKERVERRIIRKSRKVIQKAVRHQKERKHIEYSKNESSVQEDETSDRDYNLSLSCPECRESFTEPSLLDEHFSKHFEDQKEICEICNGVYKNLKSLKKHMIRHKGLKNHKCLECGKGFADKWYLRSHELIHRGIRSYVCDGCGKAFRSNSSLKIHVAQRHSDEKPYSCKLCEKRFKTTSKLKNHQLTHTGIKNYLCSLCPHTARTNGDLKRHLKTHSDIKPYECTVCNKKFRTSTELSQHNSIHTGERPHQCDLCPMSFRLKIILQNHRRTHTGEKPHVCDICGKAFTTKVVLTTHMKTHSSERPHQCDICPMAFRLKVSLQNHRRTHTGEKPHVCEICGKACTTKVVLTSHMKTHSNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -