Basic Information

Gene Symbol
CDC5L_1
Assembly
GCA_963678705.1
Location
OY783209.1:8321105-8324417[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-17 8.1e-14 52.5 1.8 2 46 9 54 8 54 0.97
2 2 1.3e-12 2e-09 38.4 0.1 1 46 60 104 60 104 0.95

Sequence Information

Coding Sequence
atgcCGCGTATTATGATTAAAGGGGGTGTGTGGCGGAACACAGAGgATGAAATTTTGAAAGCGGCTGTTATGAAATATGGAAAAAATCAATGGTCCCGGATTGCTTCACTTCTGCATCGTAAGTCAGCCAAACAATGTAAAGCCCGTTGGTATGAATGGTTGGATCCTAGTATTAAGAAAACGGAGTGGTCTAGAGAAGAAGATGAAAAGCTTCTGCATCTTGCTAAATTAATGCCTACTCAGTGGCGTACAATAGCACCCATAATTGGACGCACAGCCGCTCAATGTTTGGAAAGATATGAGAATttattAGATCAAGCACAGAGGAAAGAAGATGGAGAAGATCCTGCAGATGATCCGCGAAAACTTAAACCTGGAGAAATTGATCCAAATCCAGAAACGAAGCCAGCTCGGCCTGACCCTAAAGATATGGACGAGGATGAGTTGGAAATGCTGTCAGAAGCGAGGGCAAGGCTAGCAAATACTCAAGGTAAGAAGGCCAAAAGGAAGGCTCGAGAGAAACAGTTAGAAGAGGCTAGGCGTTTAGCAGCACTACAGAAAAGAAGAGAACTGCGGGCTGCAGGGATAGGTGGTCCTCAGCgGAAAAAGAAAAAACGTGGTATTGACTACAACAAGGAAATTCCATTTGAAAAGCGACCAGCTATTGGTTTTTATGATACCTCCAACGAAGTCTTAGATCCGACGGCGCCTGATTACAATAGGATGAGGTTGCAAAACCTTGATGGCGAGTTACGTTCCGAGAAAGAGGAGAAAGACCGTATTAAAGATAAGCAGAAGCTGAAGCAACGGAAAGAAAATGACATACCTCTAGCTATGTTACAAAACCAGGAACCTGCTAAGAAAAGGTCAAAGCTAGTTCTTCCAGAACCCCAAATATCAGACCAAGAGTTGCAGCAGGTGGTTAAACTTGGACGCGCAAGCGAAGTAGCCCGTGAAGTTGCTACTGAAAGTGGTATTGAAACAACCGAAACGCTCTTATCTAATTATTCTATAACGCAACAAGTGACTGCAACGCCAAGGACTCCGGCTCCACAAACAGACAGgatTCTTCAAGAAGCACATAATGTTATGGCATTGACTCACGTAGATACACCATTAAAAGGAGGAATAAATACGCCGTTACATTCTTCTGACTTCTCAGGATCTATGCCTCAAGCAGCAGTTGTTGCTACTCCGAACACTGTACTCTCAACGCCTTttagatcCGCTAGAGGTGATGGAGCAGCTACTCCTGCAAGTTCTGCCGGGTTTATGACACCTGGAGCTGGTGCATTGGTTCCAGTAGGAACACAGTCTCATGGCAGTTTTACTCCCAGTTTGATTCgagataaattaaatataaacactgAAGAACATATTGGAGTTGGAGATACACCGCAAGCACTACAGAGTTATAAAAaacaaATGAAAGCATCATTGCGAGCTGGATTAGGTTCCTTACCAACACCGAGAAATGACTATGAAATTGTAGTTCCTGAACAAGAGCAACCTCCTGAAGAACAAGTTTCGCAATCAACTATTGAAGACCAAGCAGATGTTGATGCAAGACGACTGACAGAATTGCAAGCTCAAAGAGAGCGAGATTTAGCTCGCAGATCTCAAGTTATTCAACGTAGTTTACCTCGACCGCATGAACCAAATATGTCTATTTTGCGGCCAGCAAGCGATGCATCAAGTCTAACTGAACTGCAACAAGCTGAAGAATTAATTAAACGTGAAATGATAACAATGCTAAACTACGATTCTACTCAAAATCCGATTGctggtaatATTAAGAGGTCTAATTTAGCACACGCACAACAGCTGGCATATTTAGAACAGCATCCCTATGATGATTTTGCAGATGAAGAAATCCAAGCTGCTCGTAATTTGCTTAATAAGGAAATTGACTTTGTTAGAAATGGCATGGGACATGGTGAATTGTCACTGGAGTCTTATACGCAAGTTTGGGAAGAATGCCAAGCACAGGTGTTGTTTTTGCCTAATCAAAATCGTTATACTCGTGCTAATCTTGCTAGTAAGAAAGACCGGTTGGAATCGTTCGAAAAACGTTTGGAACAAAACCGAAAGCATATGGCTCGTGAAGCTAAACATTGTGcgaaaatagaaaagaaaatacgGACTTATACTGCAGGGTATCAAGCACGCGCTCAAGGACTTATGAAACAATTGGAGGAAATTTTTGATCAGACAGAACAAGCGCGATTAGAATtatcaacatttaaatttttagctGAACAAGAGGAAGCTGCTTTACCTAGAAGAATAGCTAGTCTAACAGACGACGTCGATCGTcaaaaagaaagagaaaaacTGCTTCAGGAGAAGTATCGTAATTTAAAAGATGAATTAGAAACATTAAGACCTGGACAGACTGTTGCTCTGCTACACGAGCAAGTTTCTAAATCACCAGCTTAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYENLLDQAQRKEDGEDPADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGGPQRKKKKRGIDYNKEIPFEKRPAIGFYDTSNEVLDPTAPDYNRMRLQNLDGELRSEKEEKDRIKDKQKLKQRKENDIPLAMLQNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGIETTETLLSNYSITQQVTATPRTPAPQTDRILQEAHNVMALTHVDTPLKGGINTPLHSSDFSGSMPQAAVVATPNTVLSTPFRSARGDGAATPASSAGFMTPGAGALVPVGTQSHGSFTPSLIRDKLNINTEEHIGVGDTPQALQSYKKQMKASLRAGLGSLPTPRNDYEIVVPEQEQPPEEQVSQSTIEDQADVDARRLTELQAQRERDLARRSQVIQRSLPRPHEPNMSILRPASDASSLTELQQAEELIKREMITMLNYDSTQNPIAGNIKRSNLAHAQQLAYLEQHPYDDFADEEIQAARNLLNKEIDFVRNGMGHGELSLESYTQVWEECQAQVLFLPNQNRYTRANLASKKDRLESFEKRLEQNRKHMAREAKHCAKIEKKIRTYTAGYQARAQGLMKQLEEIFDQTEQARLELSTFKFLAEQEEAALPRRIASLTDDVDRQKEREKLLQEKYRNLKDELETLRPGQTVALLHEQVSKSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-