Pger007433.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- lola
- Assembly
- GCA_963678705.1
- Location
- OY783205.1:208567-212342[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-10 2.5e-06 28.1 0.0 7 45 408 446 402 446 0.92 2 2 0.14 4.9e+02 1.6 0.6 4 20 528 543 527 543 0.91
Sequence Information
- Coding Sequence
- ATGAATATCAACGAGGAGCAGCTCCACCAAACGTTTTGCTTGCGATGGAACAACTACAAGAGCAACCTGTTCGAGGTGCTGGACACGTTGGTCAGGATGGACTACTATGCAGACTGCACGATCCATGTTGACGACAATGTTGAATTCAAGGCCCACCGCATGATTCTGTCAGCATGCTCAGCGTATTTCCAATCAATATTAGGAGGCGTAACGTCCGACTATTCCCATATTCTGTTCCCTGGATGCAAGGCCTACCAGATGCGGGCTCTCCTGGAATACATGTACACGGGCGAGGTGAATGTCGCGGAGAATGACATGGCCAGCATAATGAACATTGCGGGATATTTGGAGGTCAAAGGGTTGATCGACATTCCGGGATTCGCGAAGAAACCCGAGGAAGAGGAAAACACCAAGCCGGCGATATTCACAACGTCCCCAGACATCAGTTCAACGGCGCAGAACAATTTGAGAAACACCACGTGCGTGCCGGACTCCAGCAGACTGCCGTATTCGAACTTGTTCCTCAGATCCATAGAACGTGAGCATGATCTTGATCGAGAACGAGAACGAGAACGAGATAGAGAACTTGAAAAAGAAAGAGAACGAGAGCGCGAATCGGAACTGGAGCAAAGAGAAAGAGACCGAGAACAATTGCAAAGAGAACGAGAAAGAGATCGAGAACGAGAAAGAGACCAACGTGAACAATTGCAAAGAGAGCGAGAACGAATAATACCGTGGACAATGCAAAACACTTCTCTCGCACATGGTTCACCAGGAGGTACACATAGTTTACAAACAACTGCAGCTGCAATGCTTAGTGCTGTGTACGAATCAGCTGGTGATATGAATCCACTAAAAAGAAAGAAGCTCTCCAGCATCTCTAGCATGTTAATGTCACGTGATACGCCCATTTTACGGAACGTACTAGCTCAAACAAGTGTTGCTGATTCCAGTCAACCGGTGTCTTTAGTTTGTCCTTCTATCAAAGCCGAAAGAATGAATGGATCAATGGATAATGAAAAGaataataaaaacgATGAACCGCATTCCCCATATACCGACAAGTCATATGATGAGGATCGTGATCGACGATCATTAAGTTTGTCGTCAATTTCATCTCAAGGTTATCCAGAAGCTAAAAATGGTAAAATCGTACCCTATGTTGCTCAACAAAAGCCAGAATGGAAACGATATAAGCAATATTCCCGGAATGATATCATGTGCGCCATAGAATGCGTTAAAAATGGAATGAGCGCTTTAAGTGCATCCAGAAAGTATAACGTTCCGTCCAGGACATTGTACGATAAGGTGAAGAAACTTGGCATAACTACTTCTCGGCCAATGAACAGATCGTATAAGAGATCGAATAATCTGAGCTCAGCGGCTTTTCCTTACGGTATTGGAGGCACCAACAGCCCTTATGGAAATCAGCAATCAGAAGgtGAAGAACTAAACTCAATGTCTCACCCACCAGCTCCGATACCACATCCAGCTGCAGCTCTTTTGGATCCCACATTTCTTCAACAAGCACTTGAGAGTCGTGGTGGTGACATAGCCGGTCGAGAAGCACTTCACGCGATGGCTTTTGCAGCAGCAGCACATGCAGCCGTGAATGGAATCTCCACCAGTCCTGGTAACAATGGAAACGCCCGATCTCCTAGTCCGTCAGTTGTGAAATACATGGTACAACAGAGGGCAATGTCTCCGGAACACCTAGAAGTTAAAAGAGAAATTGAGAATGAAGTTGAAGATTTATCAGTGGCCAGGAAGGAGGTAGAGCAGCCGGGGGTGATAGTTCACCCTATCAGTCTGGCAACCATGCTTAAACAAGAATTGAAACACACCACAAGACTGCGTGAAGACATGGAGGACAAGAGGAGGGAAGTCGCAATGGAGGCAAATGGCGAGCGTATTTAA
- Protein Sequence
- MNINEEQLHQTFCLRWNNYKSNLFEVLDTLVRMDYYADCTIHVDDNVEFKAHRMILSACSAYFQSILGGVTSDYSHILFPGCKAYQMRALLEYMYTGEVNVAENDMASIMNIAGYLEVKGLIDIPGFAKKPEEEENTKPAIFTTSPDISSTAQNNLRNTTCVPDSSRLPYSNLFLRSIEREHDLDRERERERDRELEKERERERESELEQRERDREQLQRERERDRERERDQREQLQRERERIIPWTMQNTSLAHGSPGGTHSLQTTAAAMLSAVYESAGDMNPLKRKKLSSISSMLMSRDTPILRNVLAQTSVADSSQPVSLVCPSIKAERMNGSMDNEKNNKNDEPHSPYTDKSYDEDRDRRSLSLSSISSQGYPEAKNGKIVPYVAQQKPEWKRYKQYSRNDIMCAIECVKNGMSALSASRKYNVPSRTLYDKVKKLGITTSRPMNRSYKRSNNLSSAAFPYGIGGTNSPYGNQQSEGEELNSMSHPPAPIPHPAAALLDPTFLQQALESRGGDIAGREALHAMAFAAAAHAAVNGISTSPGNNGNARSPSPSVVKYMVQQRAMSPEHLEVKREIENEVEDLSVARKEVEQPGVIVHPISLATMLKQELKHTTRLREDMEDKRREVAMEANGERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01137032;
- 90% Identity
- iTF_01137032;
- 80% Identity
- iTF_01137032;