Pger034773.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- bab1
- Assembly
- GCA_963678705.1
- Location
- OY783223.1:5558013-5559575[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-18 2.1e-14 54.0 0.0 1 43 28 71 28 73 0.95 2 2 0.91 3.1e+03 -1.0 1.5 6 15 159 168 157 183 0.79
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACAAATCAATCACTGGTTCATAATTTGCGCTTTCGTGAAAGAGGACCATTAAAATCATGGCGACCGGAAACAATGGCGGAAGCCATATTTAGTGTATTAAAAGAAGGATTATCGTTATCACAAGCTGCTAGAAAATATGATATACCATATCCAACGTTTGTTCTTTATGCAAATCGAGTACACAATATGTTGGGGCCCTCTGCAGATGGAGGCGCTGATCTCAGACCCAAAGGCAGAGGTCGTCCTCAACGTATTCTTCTTGGAGTTTGGCCTGATGAACACATTCGAGGGGTGATACGAACGGTTGTCTTTCGAGACCATCAACATATAAAAGAAGAAGCACATTTACAATATGCTAGACTTCCGGATGGCCTTAGTGTACAAAATTACGCGACAGGTTCGTGTAGCAACGGCCCCGGACCTGAGCCAACTGTATCACCAGGTGCAGCTGCGGCTGCTGCAGTAGCTGCCGTAGCTCAAGGTCTGCGTCAACAAATGTGCAGCATGGTAGCTGCTGCACAACATCACCCTGATCACGGTCAAGTTGCTGGTCTTGTCGGGGGACTGTCTTTAGGGCACTGTGCGAGTATGGGTCTAGGACATGGAGGGCTCCCCCATCGTCTTGGCTCTCCAGTTGGTTCTGCACACGACCTCCGTATGACAAGTCCAGAGGAGAGCCCCCTTGCATCGCCGCTTGAGCTAGCACTCGAACCAGCTGTTAATCTAGCTGTAGGAGGCACGGTGGAAGTCGGTATCGGTGTTAGTGGGATGGCCTACAAACAATCAAGGGGCTTCACATCTCCTAGACCAGAACACTTATTCCAAGAAGATATTGCAGACCTTGTCAGTCCATCTAGGGCTAGTACACCAACGCGATTAGCAATGGGGCTCAAAGATCGAAGTCCTCCAATCAAAATGGAATCACTAGCTGAATGTAGAGGGGACTAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRTVVFRDHQHIKEEAHLQYARLPDGLSVQNYATGSCSNGPGPEPTVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHHPDHGQVAGLVGGLSLGHCASMGLGHGGLPHRLGSPVGSAHDLRMTSPEESPLASPLELALEPAVNLAVGGTVEVGIGVSGMAYKQSRGFTSPRPEHLFQEDIADLVSPSRASTPTRLAMGLKDRSPPIKMESLAECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -