Pger030032.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- bab1
- Assembly
- GCA_963678705.1
- Location
- OY783218.1:3910720-3912347[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.5e-05 0.12 13.1 0.0 4 37 271 304 268 308 0.91 2 4 4e-11 1.4e-07 32.2 0.0 4 38 320 354 317 359 0.87 3 4 0.026 88 4.0 0.0 23 35 395 407 379 413 0.74 4 4 4.7e-13 1.6e-09 38.4 0.1 4 43 433 472 432 474 0.94
Sequence Information
- Coding Sequence
- ATGGAAGAAAATATAAGCTTTAAATGGGCCAATTATAATACTAATATATGTAGGGTATTTTATGATTTATGGCATTGTGATTCGTTATTGGATGTCATAATATCTGCAGAAAACAGACAAATAAAAGCTCATAGATTAATACTTTGTGCCTGCAGCGAATATTTCAGATCAATTTTAGCTAATTGTGAAGAtaatcaaccaatgattattttAAGCAATGTAAAATTTgatgatattaaattaattataaactttatttatgctggagaaattaatgttaacacctcaaacatattttctatattGGACTTAGCAAGAGAACTTAAAATTTATGGCCTTATGGATTTTGATGAGTTTGGAAACATAAATAATACTGTAACATTAAACTACAATAGTATTTCATCGTCAAACGAAAACTTTATGCATGACAATGTAGAAGAATTGGAAGATAATGATATGAGACTAGATGCTGCAAACTCTACAAATGAAATCTGTGATCGTGGTGAACACTTTGATATTTTCGCAAAATGTCAGGATTATGCTACAGATGCTTATATTCAAATATCTATGGCTCAAGAAAGCAACCATGATCCATCTAATGGTAATGAAGGTATTTCAATAAaaccaaataaattattatttaaaatacctgCTGAGTTATATAAACATGAGGAGCATATTAAAAATTGCGatgttacaataaataattgtaacattttCGATAATGAGCTTGAACACGAAATAGGTAACACAGAAGATGTTTGCCAAACAACTGATACTAAGAAgccaaataaattatatgataaaaatacaTTGGATCAAGCTTTAGATGAAATAAGAGCTGGAAATACTCTAGCCAAAGTATCACTTATGTATAATATTCCAAGGTCTTCGTTGTATAGCAAAGCGAAGGCAAATAATGCTTTAGTAATAACTCGAAACGGAAGGACTGACTCGGAAATTAATACCGCTATAGATGCTGTTATCAATTGTGGGTGTTCTCTATCTGAAGCATCTAAGAAATTCAATATACCCAAAACAGTGTTGTGGCGAcgagttaaaaaatataataagaattaTGGTGGAACAAGAAAGTTTAAAAGGTCAACAGCGATCAAAATTTCTACTCAACGCAATGATGCCATCAAAGCTCTGGAAAAAGGAGAATCAATAACCACAGTATCAATTAACTATCAAATTCCCAAAAGCACATTATTTAGAGAAAAAGCACGATTAGTAGAAATCGGAAAATTACCAAAAAGTTGTTTGAAAAAACGAGGACAAGAATGTAAGAAACGACTTCAAGAAGCTATTTCTGCCTGTAGACAGGGAGTTCTCTCTCAAAGCGCAGCCGCACACAAATATAATGTTTCCAAAACGACGATATGGCGGCATATGCAACAAAATCCTCAAAATATGGCAATTGCCGATTTTGTCGAAGTTCCTCCTTTTTTCTCTTCCGATAATTTATCTTCTAAACAATCCGTTTTTGAAAGTGGCTTTATTAAACAAGAATGTTAA
- Protein Sequence
- MEENISFKWANYNTNICRVFYDLWHCDSLLDVIISAENRQIKAHRLILCACSEYFRSILANCEDNQPMIILSNVKFDDIKLIINFIYAGEINVNTSNIFSILDLARELKIYGLMDFDEFGNINNTVTLNYNSISSSNENFMHDNVEELEDNDMRLDAANSTNEICDRGEHFDIFAKCQDYATDAYIQISMAQESNHDPSNGNEGISIKPNKLLFKIPAELYKHEEHIKNCDVTINNCNIFDNELEHEIGNTEDVCQTTDTKKPNKLYDKNTLDQALDEIRAGNTLAKVSLMYNIPRSSLYSKAKANNALVITRNGRTDSEINTAIDAVINCGCSLSEASKKFNIPKTVLWRRVKKYNKNYGGTRKFKRSTAIKISTQRNDAIKALEKGESITTVSINYQIPKSTLFREKARLVEIGKLPKSCLKKRGQECKKRLQEAISACRQGVLSQSAAAHKYNVSKTTIWRHMQQNPQNMAIADFVEVPPFFSSDNLSSKQSVFESGFIKQEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01137018;
- 90% Identity
- iTF_01137018;
- 80% Identity
- iTF_01137018;