Pger028954.2
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- retn
- Assembly
- GCA_963678705.1
- Location
- OY783217.1:3967062-3973131[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-21 2.9e-17 63.9 0.0 10 89 23 100 15 100 0.93
Sequence Information
- Coding Sequence
- ATGAGAGCTGATTTTCAAAAGTTATCACCCGAGATATATAATAAACCTCATTGTTTGTTCATCATTAATCGGTTGATTAAAGAGACTgGAACTCCAATTAATCGTCTCCCAATCATGGCTAAATCTGTTCTGGACCTATTCGAACTCTATAACTTGGTAATCGCACGAGGAGGATTAGTGGACgtaatcaataaaaaattatggCAAGAAATAATAAAAGGTCTTCATCTTCCTTCCAGTATAACATCAGCAGCATTTACCCTACGTACACAATATATGAAGTATCTATATCCGTATGAGTGCGAGAAGAAGAATCTTAGCACGCCGCAAGAGCTCCAAGCGGCCATTGATGGAAACAGACGCGAGGGAAGGCGATCGTCATATGGAAATTATGAGAACCAAATGCAAAATCAGATGCAGCTGCCTTCTACACAGCGAAGCCCAATACCACCAAGTTTACAATTAACACACCCGATGACACCACTGGCACTGGTAACACATCAGCAGCAAGCACATCTACAACAAAGCCGTGCAGCAATGGCTCATGCCGCTCATGGAACAACTCCAGCAATTCAAGAAGCACACATGATGGAATACCTTAAAATACTGCAACACACTGAACTCTATAACGGCAGACTCCATGCACGTAGTCCGACCACAGAAATCACTTCTAGAGATGCTATCAATGCTTTAGAATTATCACGTGttcaaaatatgttattaaacaattattacatGAACAACACATCTCCACCAAATTCTGTTAGAGATAAATCAAAATCTCCACCAAATGCACAAGAACCACAAAGGGAAGCTTTAAATCTGAGTGATGCCCCAGAAGCCCATACTTCAAGTACTCCAATTACAAGCTTCAAACGTGAATTGCCAGATAGTGATCTTCTACCACCACCTCCAGCCAAACGAGGGCATACTAGTACAAGCAATGGAATTCGTGAAGATACTGATGAAGAAATCGTTTCACCGGAAAAGAATCTAAATCCGCTTTCATTTGGAGCTAATTTTAAGATTGCTAGCAAAGTAGATAGCATCAATGGAGGCCAACAACTAGTCGTTTCTATGGAGCTGAATGGCGTTATGTACCAGGGTACTCTCTTTGCAAACGCCCAAGGATCATCTCAAACGCAACATCGAGATTCTCGGCCTCTAGTTTCATAA
- Protein Sequence
- MRADFQKLSPEIYNKPHCLFIINRLIKETGTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPQELQAAIDGNRREGRRSSYGNYENQMQNQMQLPSTQRSPIPPSLQLTHPMTPLALVTHQQQAHLQQSRAAMAHAAHGTTPAIQEAHMMEYLKILQHTELYNGRLHARSPTTEITSRDAINALELSRVQNMLLNNYYMNNTSPPNSVRDKSKSPPNAQEPQREALNLSDAPEAHTSSTPITSFKRELPDSDLLPPPPAKRGHTSTSNGIREDTDEEIVSPEKNLNPLSFGANFKIASKVDSINGGQQLVVSMELNGVMYQGTLFANAQGSSQTQHRDSRPLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -