Basic Information

Insect: Pandemis heparana
Gene Symbol: B0310.2
Assembly: GCA_963854515.1
Location: OY978033.1:2087146-2112848[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6.6 4.3e+02 2.4 0.5 1 10 348 357 348 370 0.72

2 11 0.034 2.2 9.6 0.7 1 23 377 400 377 400 0.93

3 11 0.53 35 5.9 0.2 1 23 404 426 404 426 0.92

4 11 0.0057 0.38 12.0 1.0 1 23 431 454 431 454 0.98

5 11 0.0038 0.25 12.6 0.7 1 23 458 481 458 481 0.96

6 11 9.5 6.3e+02 1.9 0.1 2 21 494 513 494 514 0.85

7 11 0.48 32 6.0 0.1 3 23 572 593 571 593 0.96

8 11 0.013 0.85 10.9 0.5 2 20 609 627 608 630 0.92

9 11 7.6e-06 0.0005 21.1 2.5 1 23 636 658 636 658 0.99

10 11 0.00032 0.021 16.0 2.8 1 23 665 687 665 687 0.98

11 11 0.00015 0.0098 17.0 2.2 1 23 693 716 693 716 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6.6	4.3e+02	2.4	0.5	1	10	348	357	348	370	0.72
2	11	0.034	2.2	9.6	0.7	1	23	377	400	377	400	0.93
3	11	0.53	35	5.9	0.2	1	23	404	426	404	426	0.92
4	11	0.0057	0.38	12.0	1.0	1	23	431	454	431	454	0.98
5	11	0.0038	0.25	12.6	0.7	1	23	458	481	458	481	0.96
6	11	9.5	6.3e+02	1.9	0.1	2	21	494	513	494	514	0.85
7	11	0.48	32	6.0	0.1	3	23	572	593	571	593	0.96
8	11	0.013	0.85	10.9	0.5	2	20	609	627	608	630	0.92
9	11	7.6e-06	0.0005	21.1	2.5	1	23	636	658	636	658	0.99
10	11	0.00032	0.021	16.0	2.8	1	23	665	687	665	687	0.98
11	11	0.00015	0.0098	17.0	2.2	1	23	693	716	693	716	0.93

Sequence Information

Coding Sequence: ATGCTAGCTTTGTTCCCTAAAGAGCCTAACCTCCGCAACGCATGGACCGAGGCCCTGGGCATGTCCGACTGGGAGCCCAAGGACCGCAGCACCATCTGCTCCGAGCACTTCCGGAACGAGGACTTCTATGAGACCCGCTGTGGGTTGCGGAAGATCAAGAATGGAGCTGTTCCCGTTGTGGCActggaTGTAGCTGATGATCTGGATGCACCAGCTGCACTGAGGGTGTGCAGAATATGCCTGGCTACAGATAGCAAGATGTACAATATAAGAGATTACAAACTGGAGCATGCCTATGCAGAAGTCAGCGGGATGACGttGAGCGAAGAAGACAAACTGCCACAGAAGTTGTGCTGGGAATGTACCTCGCGGCTGCTGGCTGGTGCAAGGTTCAGAGCTAAGGTGCTGAGGACACATGAGCTGCTGACCGGGCTGCCGCACGCTAATCAATATattACAATTCGTGATATTCGTTCAATAAACCGCCGACAGAATCAACTGAGGTCATCACTATCACATCAATACTATGATCCCAACGACTATCACATCCACATCAAAGACGATCAGATCATTGTCAAATCAGAAATAAAGGAACTAGATGATTACGAAGACAAAGTACCACCAATAGCCGAAGTTGAATTAATAAAAGACGAAAAAAACAATACCGAGTTTTATGATGAGTTTCATGATGATATAAATGATTTTCATGATGTAGATAATGGTGATAATGCTGATGATTTTGTTGATGCTCCGATTGAAAATGATAGTGATGATAAAGTGTTGAGTGAGGTGTATGTTAAGAAAAAGAGGAAATTGAAGAAGAAAGTTAAGGTTAAGAAGAAAGAGAAGGTTGTgaggaagaaagaagaggagGAGAGTCCGATGACTACCATGGAcaagtataaaatatcagaCGTGAAGCGCCGGAAGACCACAGACAACCTGGACGAGTCATTATTCACAATAACCACTTTAGGGTACGATGAGCAGATTGCGGAGATACAGAAGAGACAAGAAACTAGTAACTATAAGAGCGCCCCATTCAAGTGCAGCGTGTGTTATCGCGGCTTCCTCGTGCGGGACAGATACGACGCGCACGTCGTGCGGCACAGCGAGCAATCCGGCGCGTACGAGTGTTTCATATGCAAGAGTCGGCTGAAGAGCGCGCGCGCCCTCCGCAAGCATCTTACGGCACAGCATACGGAGAAGTTCAGCTGCAAAGGCTGCCCGTTCGTCACAAGGAACAGGGGTGTGGCCAGAGAGCACGAGAAATGGCATGCGGGAACCAAATACCAGTGTCCACACTGTCCTAGCGAATTCGATAAATTAACCACGTATATGGGGCACATACGAATCAAGCACGTTTCCGATTTCGTCTGCGAGCTCTGCGGGTATACGTTTGTGAGTAAGAAAGGAATAGACGTACACAAGAAGAAGAAACACCGTCTGGCTGATAAGACGGTAACACTGGATGGTCCGTACTGCGAGACGTGCGAGGTGCGGTTCGTGTCGGAGGAGGCGCACGCGCGCCACCTCAAGCTGTCCTCTCGACACAGCAGCGACAATGATCCGAATCGAATCCGCAACGACTCGCAAAGCATGAACGCGGACAAGAACGGGCGAGTGGTGAGGAAGGTGGAGCGCCGGCCCGTGATACACCCGCGGGGCTGCGGCGACAAGGAGCCCGAGTGTGACACCGGCGGGCCCGTCGCCTGCGAACAGTGTGGAGTTCAGCTGCGCGACTTGCGTCTGTACGCGCAACACTTCAGACGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACGCCCTGCATGTGCGAGCAATGCGGACGGATATTCCAGAGCATGGCCCTTCTCAAGGACCACATGTGGGTCCATACCGGCGAGAAGCGTTTCAAATGCGACCGCTGCGACAAGAGCTTCACGCAGAAGACGAATCTCGTGTTCCACATGAGGGTCCACAGCGCGACGCGGCCCAGCTACGAGTGCCCGCTGTGTGGGAAGCACTTCGCGTTCTTCAATAATAGGAGACGGCATATGTTTATCCACACCGGATTGAAGCCGTTCAAGTGCGAGACATGCGGCAAGTGTTTCACGACGGCGGGCGAGCAGCGCGCGCACGTGGAGCACGTGCACATGAAGAAGCCCTGGCCGAAGCGGCAGCGCCATCGCGACGCCGACCCGGCGCCCTGGCAGAAGTGCCATGATCCCATGGAAGACTAA
Protein Sequence: MLALFPKEPNLRNAWTEALGMSDWEPKDRSTICSEHFRNEDFYETRCGLRKIKNGAVPVVALDVADDLDAPAALRVCRICLATDSKMYNIRDYKLEHAYAEVSGMTLSEEDKLPQKLCWECTSRLLAGARFRAKVLRTHELLTGLPHANQYITIRDIRSINRRQNQLRSSLSHQYYDPNDYHIHIKDDQIIVKSEIKELDDYEDKVPPIAEVELIKDEKNNTEFYDEFHDDINDFHDVDNGDNADDFVDAPIENDSDDKVLSEVYVKKKRKLKKKVKVKKKEKVVRKKEEEESPMTTMDKYKISDVKRRKTTDNLDESLFTITTLGYDEQIAEIQKRQETSNYKSAPFKCSVCYRGFLVRDRYDAHVVRHSEQSGAYECFICKSRLKSARALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKTVTLDGPYCETCEVRFVSEEAHARHLKLSSRHSSDNDPNRIRNDSQSMNADKNGRVVRKVERRPVIHPRGCGDKEPECDTGGPVACEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHVEHVHMKKPWPKRQRHRDADPAPWQKCHDPMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325875;
90% Identity: iTF_00325875;
80% Identity: iTF_01135851;