Basic Information

Insect: Pandemis heparana
Gene Symbol: -
Assembly: GCA_963854515.1
Location: OY978019.1:10199753-10210340[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00063 0.042 15.0 1.8 1 23 418 440 418 440 0.97

2 7 1.4e-06 9.1e-05 23.4 1.3 1 23 444 466 444 466 0.99

3 7 4.3e-05 0.0028 18.7 1.1 1 23 475 497 475 497 0.96

4 7 4.7e-05 0.0031 18.6 3.9 1 23 512 534 512 534 0.98

5 7 9.1e-06 0.0006 20.8 1.6 1 23 540 562 540 562 0.98

6 7 2.9e-06 0.00019 22.4 1.0 1 23 568 590 568 590 0.98

7 7 0.001 0.069 14.4 3.4 1 21 595 615 595 616 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00063	0.042	15.0	1.8	1	23	418	440	418	440	0.97
2	7	1.4e-06	9.1e-05	23.4	1.3	1	23	444	466	444	466	0.99
3	7	4.3e-05	0.0028	18.7	1.1	1	23	475	497	475	497	0.96
4	7	4.7e-05	0.0031	18.6	3.9	1	23	512	534	512	534	0.98
5	7	9.1e-06	0.0006	20.8	1.6	1	23	540	562	540	562	0.98
6	7	2.9e-06	0.00019	22.4	1.0	1	23	568	590	568	590	0.98
7	7	0.001	0.069	14.4	3.4	1	21	595	615	595	616	0.95

Sequence Information

Coding Sequence: ATGGATAGATTCTGTCGCGGCTGTTTGGTGCGGTGTGATGAACCAGCGGAGCTTTTACAGTATACCGAAAAAAACAGACGATTATTTGTTTACTCCACTGGATTACAGGTAAAACGCAATGACACATTCACATTCCAACTGTGCAAAGACTGCTACCTCAATATGAAAGTGGCATGTAGCTTCAAGAAGCAGTGCCGTAGCTCGGATAAGAAGTTGAAGGGTTACTCCGCATCAAAGGATACGGGCGAGACCATGGACTTGAGCACGTACCTGAAGAATAATGATGACTCTTGGACATATCGATTTCCCACGTTGTTTGGTAGCAGTACTCCAGCACATCAAAAACCTAAAGATGATGATACAGAATCCTCAACAAGTATACGCAATTTCATGACGGAGCTCATGCCTGAAACTGACCTGTTGGAGACAGAGGCTCGCATCATCAAGGAGGTCATCCAAGAGGATGCCGATTTGCTAGATGAATCATTGGACTCGCACTGGTTGCAAGATGATGTGTCTATAGACACTAACTTTAGGCTAGATTTTAGTTTCAGCCCATTTTCTGCATCGCGGTCAGGAAATAATGCAATCACCCCAAGTAAACTGCCGCAACACAGTCCAGTTGAAAAACCAAATGAACAGGAACTAGACTATGCTAGTAATAATGCTTTAGATATGCCAATTCTCGAAAACAGCTCTGATAAGTTGATTCCAAATAAACCACAAAATAACTGCGTTTTTGAAGAAGCAATTGATCCAATCAAGGTAGTCGATGATATTATAAAGCAAGAAATAGATACGGATATTATTAAGTTGAATTGTGATAACGTtggtttaaataatataaataattttccTGAACCTGAAATATGTACAATAGACAAAAATCTAGAAGAGGCGCTGAAAAATTGTAATGATAACGAATTTTTATTGGATGAGTTACTTGTCTCACCGCAAGTTATTCCAGGTATGAAATCACCGCCAACGCCATtaataaacaacattttatttggAGAAAAACTAGATATGAATGAAAATAGCAACAATTCACACAAGTACATGCCAGGACATTTGatagaaaattatgaaaatgtcTTAGGGGACATGGAAATGGCTGAGTTTGATATTGATATCAATAAGATAGAAGAATTAGAGTTACACGAAACTAAGACTGAGATTATTAATGAAGGTGAACAGAAAAATGTAGAGGAGATGCCTCCAGATAAAGATTTGCAGAATAATATAACGAATTTTTACTGTAAAATGTGCAGTCAACAGTTTAGTAGCTTGCCGAAATTGAAGCGACACGTCAATTTGCATAGAAGACGATATACTTGTGATTATTGTGGAAAGGAATCCAAGGATAAAACGAATTTTGCGAGGCATATTCAAACTCATACGcgtaaacaaacaaatcaaaaatatgaatgtgAGAAATGCAAGCTGACGTTCTCTTCACAAGTGACTCTTCAAAAGCATGAAGATTCGCACTCGGGCCAAATACGTGTGAACAAAACTAACACGAcaaagAAATTTATGTGTACAAAATGCGGGTTTTCCtgcaacaaaaaaagtaacttgaTGATCCACATCAACAGGCACAATAAAACATACAAATTCACCTGCCCTGAATGTAGCAAAGGGTATCATAGGCGTTCGGAATTGGTTATACATATGagATATCATACGGGTGAAAGACCATTCCGCTGCAACTTCTGTGACCGAGGCTTTCCAAGGAGAGACGCCCTCACCCGACACGTCAAGTCTCATTTAGAAAAACAATTTGTGTGTGAATACTGCGAGTGTCAGTTCGTGTCCAACGACAACCTGAGGAACCATCACAAGAAATCTAAAAAATGTAGAAAAGCAAGAGACACAATCGCCAATATGCAAGAGATAGCTGACAAGGAGGAGTCTACCAAGTTTGTAGTTACCGAAACGACCGTGGACAGACAGAAATAA
Protein Sequence: MDRFCRGCLVRCDEPAELLQYTEKNRRLFVYSTGLQVKRNDTFTFQLCKDCYLNMKVACSFKKQCRSSDKKLKGYSASKDTGETMDLSTYLKNNDDSWTYRFPTLFGSSTPAHQKPKDDDTESSTSIRNFMTELMPETDLLETEARIIKEVIQEDADLLDESLDSHWLQDDVSIDTNFRLDFSFSPFSASRSGNNAITPSKLPQHSPVEKPNEQELDYASNNALDMPILENSSDKLIPNKPQNNCVFEEAIDPIKVVDDIIKQEIDTDIIKLNCDNVGLNNINNFPEPEICTIDKNLEEALKNCNDNEFLLDELLVSPQVIPGMKSPPTPLINNILFGEKLDMNENSNNSHKYMPGHLIENYENVLGDMEMAEFDIDINKIEELELHETKTEIINEGEQKNVEEMPPDKDLQNNITNFYCKMCSQQFSSLPKLKRHVNLHRRRYTCDYCGKESKDKTNFARHIQTHTRKQTNQKYECEKCKLTFSSQVTLQKHEDSHSGQIRVNKTNTTKKFMCTKCGFSCNKKSNLMIHINRHNKTYKFTCPECSKGYHRRSELVIHMRYHTGERPFRCNFCDRGFPRRDALTRHVKSHLEKQFVCEYCECQFVSNDNLRNHHKKSKKCRKARDTIANMQEIADKEESTKFVVTETTVDRQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01135118;
90% Identity: -
80% Identity: -